RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 RGS17Q9UGC6 210 aaPredicted RBP24.92■■□□□ 1.58
TMEM88-202ENST00000574668 FAM135BQ49AJ0 1406 aa24.92■■□□□ 1.58
TMEM88-202ENST00000574668 BCANQ96GW7 911 aa24.91■■□□□ 1.58
TMEM88-202ENST00000574668 SLC52A1Q9NWF4 448 aa24.91■■□□□ 1.58
TMEM88-202ENST00000574668 HFM1A2PYH4 1435 aa24.88■■□□□ 1.57
TMEM88-202ENST00000574668 NAIPQ13075 1403 aa24.88■■□□□ 1.57
TMEM88-202ENST00000574668 TRIM26Q12899 539 aaPredicted RBP24.88■■□□□ 1.57
TMEM88-202ENST00000574668 RPRD2Q5VT52 1461 aaKnown RBP24.87■■□□□ 1.57
TMEM88-202ENST00000574668 NWD1Q149M9 1564 aa24.87■■□□□ 1.57
TMEM88-202ENST00000574668 ROBO1Q9Y6N7 1651 aa24.86■■□□□ 1.57
TMEM88-202ENST00000574668 ZFYVE9O95405 1425 aa24.86■■□□□ 1.57
TMEM88-202ENST00000574668 NKTRP30414 1462 aaKnown RBP24.84■■□□□ 1.57
TMEM88-202ENST00000574668 MYO5BQ9ULV0 1848 aa24.84■■□□□ 1.57
TMEM88-202ENST00000574668 GCC2Q8IWJ2 1684 aa24.83■■□□□ 1.57
TMEM88-202ENST00000574668 RIMS2Q9UQ26 1411 aa24.83■■□□□ 1.57
TMEM88-202ENST00000574668 PPP1R15AO75807 674 aaPredicted RBP24.82■■□□□ 1.56
TMEM88-202ENST00000574668 PLEKHG1Q9ULL1 1385 aa24.81■■□□□ 1.56
TMEM88-202ENST00000574668 TMEM131LA2VDJ0 1609 aa24.81■■□□□ 1.56
TMEM88-202ENST00000574668 UNC13BO14795 1591 aa24.8■■□□□ 1.56
TMEM88-202ENST00000574668 MSH6P52701 1360 aa24.8■■□□□ 1.56
TMEM88-202ENST00000574668 SETD5Q9C0A6 1442 aa24.79■■□□□ 1.56
TMEM88-202ENST00000574668 CHGAP10645 457 aaKnown RBP24.79■■□□□ 1.56
TMEM88-202ENST00000574668 NUTM2DQ5VT03 806 aaPredicted RBP24.79■■□□□ 1.56
TMEM88-202ENST00000574668 TRIM52Q96A61 297 aa24.77■■□□□ 1.56
TMEM88-202ENST00000574668 POTEAQ6S8J7 498 aa24.76■■□□□ 1.55
TMEM88-202ENST00000574668 SLAIN2Q9P270 581 aa24.76■■□□□ 1.55
TMEM88-202ENST00000574668 E9PCH4 1651 aa24.75■■□□□ 1.55
TMEM88-202ENST00000574668 NUP155O75694 1391 aa24.75■■□□□ 1.55
TMEM88-202ENST00000574668 CHD2O14647 1828 aaKnown RBP24.75■■□□□ 1.55
TMEM88-202ENST00000574668 HDGFP51858 240 aaKnown RBP24.74■■□□□ 1.55
TMEM88-202ENST00000574668 TBX22Q9Y458 520 aa24.72■■□□□ 1.55
TMEM88-202ENST00000574668 ADAMTS13Q76LX8 1427 aa24.71■■□□□ 1.55
TMEM88-202ENST00000574668 ACIN1Q9UKV3 1341 aaKnown RBP24.71■■□□□ 1.55
TMEM88-202ENST00000574668 PHLPP1O60346 1717 aa24.7■■□□□ 1.54
TMEM88-202ENST00000574668 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.7■■□□□ 1.54
TMEM88-202ENST00000574668 RAB3GAP2Q9H2M9 1393 aa24.69■■□□□ 1.54
TMEM88-202ENST00000574668 IQGAP3Q86VI3 1631 aa24.69■■□□□ 1.54
TMEM88-202ENST00000574668 C14orf37Q86TY3 774 aa24.67■■□□□ 1.54
TMEM88-202ENST00000574668 JCADQ9P266 1359 aa24.65■■□□□ 1.54
TMEM88-202ENST00000574668 HRCP23327 699 aa24.63■■□□□ 1.53
TMEM88-202ENST00000574668 COL16A1Q07092 1604 aaPredicted RBP24.63■■□□□ 1.53
TMEM88-202ENST00000574668 DIP2AQ14689 1571 aa24.63■■□□□ 1.53
TMEM88-202ENST00000574668 NCOA3Q9Y6Q9 1424 aa24.62■■□□□ 1.53
TMEM88-202ENST00000574668 PTPRUQ92729 1446 aa24.61■■□□□ 1.53
TMEM88-202ENST00000574668 SLC4A1APQ9BWU0 796 aaKnown RBP24.61■■□□□ 1.53
TMEM88-202ENST00000574668 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.6■■□□□ 1.53
TMEM88-202ENST00000574668 PIK3R4Q99570 1358 aa24.59■■□□□ 1.53
TMEM88-202ENST00000574668 C19orf44Q9H6X5 657 aa24.59■■□□□ 1.53
TMEM88-202ENST00000574668 AMOTL2Q9Y2J4 779 aa24.59■■□□□ 1.53
TMEM88-202ENST00000574668 TRPM2O94759 1503 aa24.58■■□□□ 1.53
TMEM88-202ENST00000574668 PCGF6Q9BYE7 350 aa24.58■■□□□ 1.53
TMEM88-202ENST00000574668 LRP6O75581 1613 aa24.57■■□□□ 1.52
TMEM88-202ENST00000574668 ATF3P18847 181 aa24.57■■□□□ 1.52
TMEM88-202ENST00000574668 CADPS2Q86UW7 1296 aa24.57■■□□□ 1.52
TMEM88-202ENST00000574668 SETD1AO15047 1707 aaKnown RBP24.55■■□□□ 1.52
TMEM88-202ENST00000574668 MPHOSPH9Q99550 1183 aa24.54■■□□□ 1.52
TMEM88-202ENST00000574668 AHDC1Q5TGY3 1603 aaPredicted RBP24.53■■□□□ 1.52
TMEM88-202ENST00000574668 NRXN3Q9Y4C0 1643 aa24.53■■□□□ 1.52
TMEM88-202ENST00000574668 ZNF326Q5BKZ1 582 aaKnown RBP24.51■■□□□ 1.51
TMEM88-202ENST00000574668 BRINP3Q76B58 766 aa24.51■■□□□ 1.51
TMEM88-202ENST00000574668 SPHKAPQ2M3C7 1700 aa24.51■■□□□ 1.51
TMEM88-202ENST00000574668 SPATA31A6Q5VVP1 1343 aa24.51■■□□□ 1.51
TMEM88-202ENST00000574668 MEX3CQ5U5Q3 659 aaKnown RBP24.5■■□□□ 1.51
TMEM88-202ENST00000574668 METP08581 1390 aa24.49■■□□□ 1.51
TMEM88-202ENST00000574668 SETBP1Q9Y6X0 1596 aa24.49■■□□□ 1.51
TMEM88-202ENST00000574668 XRN1Q8IZH2 1706 aaKnown RBP24.49■■□□□ 1.51
TMEM88-202ENST00000574668 SHPRHQ149N8 1683 aa24.46■■□□□ 1.51
TMEM88-202ENST00000574668 DCCP43146 1447 aa24.44■■□□□ 1.5
TMEM88-202ENST00000574668 CLTCL1P53675 1640 aa24.44■■□□□ 1.5
TMEM88-202ENST00000574668 NUTM2BA6NNL0 878 aaPredicted RBP24.44■■□□□ 1.5
TMEM88-202ENST00000574668 NUTM2EB1AL46 878 aaPredicted RBP24.44■■□□□ 1.5
TMEM88-202ENST00000574668 FOXD1Q16676 465 aa24.44■■□□□ 1.5
TMEM88-202ENST00000574668 NUTM2AQ8IVF1 878 aaPredicted RBP24.44■■□□□ 1.5
TMEM88-202ENST00000574668 ASXL1Q8IXJ9 1541 aa24.44■■□□□ 1.5
TMEM88-202ENST00000574668 MST1RQ04912 1400 aa24.44■■□□□ 1.5
TMEM88-202ENST00000574668 ZNF772Q68DY9 489 aaPredicted RBP24.42■■□□□ 1.5
TMEM88-202ENST00000574668 NEXMIFQ5QGS0 1516 aa24.41■■□□□ 1.5
TMEM88-202ENST00000574668 DDX17Q92841 729 aaKnown RBP24.4■■□□□ 1.5
TMEM88-202ENST00000574668 ADGRL3Q9HAR2 1447 aa24.36■■□□□ 1.49
TMEM88-202ENST00000574668 NHSL1Q5SYE7 1610 aa24.35■■□□□ 1.49
TMEM88-202ENST00000574668 NALCNQ8IZF0 1738 aa24.35■■□□□ 1.49
TMEM88-202ENST00000574668 AFF2P51816 1311 aa24.33■■□□□ 1.48
TMEM88-202ENST00000574668 RXRBP28702 533 aa24.32■■□□□ 1.48
TMEM88-202ENST00000574668 UPF1Q92900 1129 aaKnown RBP eCLIP24.32■■□□□ 1.48
TMEM88-202ENST00000574668 LRRC59Q96AG4 307 aaKnown RBP24.31■■□□□ 1.48
TMEM88-202ENST00000574668 KIF1BO60333 1816 aa24.31■■□□□ 1.48
TMEM88-202ENST00000574668 PNPLA6Q8IY17 1366 aa24.29■■□□□ 1.48
TMEM88-202ENST00000574668 CCDC144AA2RUR9 1427 aa24.28■■□□□ 1.48
TMEM88-202ENST00000574668 ROBO2Q9HCK4 1378 aa24.28■■□□□ 1.48
TMEM88-202ENST00000574668 C1orf167Q5SNV9 1468 aa24.27■■□□□ 1.48
TMEM88-202ENST00000574668 C8orf37Q96NL8 207 aa24.27■■□□□ 1.48
TMEM88-202ENST00000574668 DHX57Q6P158 1386 aaKnown RBP24.27■■□□□ 1.48
TMEM88-202ENST00000574668 ANKRD30BQ9BXX2 1392 aa24.27■■□□□ 1.48
TMEM88-202ENST00000574668 VGFO15240 615 aaPredicted RBP24.25■■□□□ 1.47
TMEM88-202ENST00000574668 PTCH1Q13635 1447 aa24.25■■□□□ 1.47
TMEM88-202ENST00000574668 ORAI2Q96SN7 254 aa24.24■■□□□ 1.47
TMEM88-202ENST00000574668 CDK12Q9NYV4 1490 aaPredicted RBP24.22■■□□□ 1.47
TMEM88-202ENST00000574668 ADAMTS2O95450 1211 aa24.21■■□□□ 1.47
TMEM88-202ENST00000574668 QTRT2Q9H974 415 aaKnown RBP24.2■■□□□ 1.46
TMEM88-202ENST00000574668 RPGRIP1LQ68CZ1 1315 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms