RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 UBTFP17480 764 aaKnown RBP13.62□□□□□ -0.23
SNX29-208ENST00000569801 CADPS2Q86UW7 1296 aa13.62□□□□□ -0.23
SNX29-208ENST00000569801 SEPT12Q8IYM1 358 aa13.62□□□□□ -0.23
SNX29-208ENST00000569801 SLC26A8Q96RN1 970 aa13.62□□□□□ -0.23
SNX29-208ENST00000569801 EID1Q9Y6B2 187 aa13.62□□□□□ -0.23
SNX29-208ENST00000569801 NCOA2Q15596 1464 aa13.61□□□□□ -0.23
SNX29-208ENST00000569801 ARHGAP35Q9NRY4 1499 aa13.61□□□□□ -0.23
SNX29-208ENST00000569801 A2MP01023 1474 aa13.61□□□□□ -0.23
SNX29-208ENST00000569801 ATF3P18847 181 aa13.6□□□□□ -0.23
SNX29-208ENST00000569801 C14orf37Q86TY3 774 aa13.6□□□□□ -0.23
SNX29-208ENST00000569801 NKTRP30414 1462 aaKnown RBP13.6□□□□□ -0.23
SNX29-208ENST00000569801 CAMSAP2Q08AD1 1489 aa13.6□□□□□ -0.23
SNX29-208ENST00000569801 SPAG9O60271 1321 aaKnown RBP13.6□□□□□ -0.23
SNX29-208ENST00000569801 FAM161AQ3B820 660 aa13.59□□□□□ -0.23
SNX29-208ENST00000569801 KRT27Q7Z3Y8 459 aa13.59□□□□□ -0.23
SNX29-208ENST00000569801 MAST1Q9Y2H9 1570 aa13.57□□□□□ -0.24
SNX29-208ENST00000569801 KDM5AP29375 1690 aaKnown RBP13.56□□□□□ -0.24
SNX29-208ENST00000569801 FMN1Q68DA7 1419 aa13.56□□□□□ -0.24
SNX29-208ENST00000569801 MYO5CQ9NQX4 1742 aa13.56□□□□□ -0.24
SNX29-208ENST00000569801 APLP1P51693 650 aa13.56□□□□□ -0.24
SNX29-208ENST00000569801 DDX17Q92841 729 aaKnown RBP13.56□□□□□ -0.24
SNX29-208ENST00000569801 PLXNC1O60486 1568 aa13.55□□□□□ -0.24
SNX29-208ENST00000569801 C19orf44Q9H6X5 657 aa13.54□□□□□ -0.24
SNX29-208ENST00000569801 WASHC2CQ9Y4E1 1318 aa13.54□□□□□ -0.24
SNX29-208ENST00000569801 TNS2Q63HR2 1409 aa13.54□□□□□ -0.24
SNX29-208ENST00000569801 LRRIQ1Q96JM4 1722 aa13.53□□□□□ -0.24
SNX29-208ENST00000569801 CHD4Q14839 1912 aa13.53□□□□□ -0.24
SNX29-208ENST00000569801 CAMKK2Q96RR4 588 aa13.53□□□□□ -0.24
SNX29-208ENST00000569801 SYT17Q9BSW7 474 aa13.53□□□□□ -0.24
SNX29-208ENST00000569801 PTCH1Q13635 1447 aa13.53□□□□□ -0.24
SNX29-208ENST00000569801 HNRNPMP52272 730 aaKnown RBP eCLIP13.52□□□□□ -0.25
SNX29-208ENST00000569801 NBPF8Q3BBV2 869 aa13.5□□□□□ -0.25
SNX29-208ENST00000569801 NBPF14Q5TI25 921 aa13.5□□□□□ -0.25
SNX29-208ENST00000569801 SAMD9LQ8IVG5 1584 aa13.49□□□□□ -0.25
SNX29-208ENST00000569801 SLIT1O75093 1534 aa13.49□□□□□ -0.25
SNX29-208ENST00000569801 DISP2A7MBM2 1401 aa13.49□□□□□ -0.25
SNX29-208ENST00000569801 AATKQ6ZMQ8 1374 aa13.49□□□□□ -0.25
SNX29-208ENST00000569801 FHDC1Q9C0D6 1143 aaPredicted RBP13.49□□□□□ -0.25
SNX29-208ENST00000569801 ATP1B4Q9UN42 357 aaPredicted RBP13.49□□□□□ -0.25
SNX29-208ENST00000569801 JMYQ8N9B5 988 aa13.48□□□□□ -0.25
SNX29-208ENST00000569801 ASXL1Q8IXJ9 1541 aa13.48□□□□□ -0.25
SNX29-208ENST00000569801 NCOA3Q9Y6Q9 1424 aa13.47□□□□□ -0.25
SNX29-208ENST00000569801 SPHKAPQ2M3C7 1700 aa13.47□□□□□ -0.25
SNX29-208ENST00000569801 SHANK3Q9BYB0 1731 aa13.47□□□□□ -0.25
SNX29-208ENST00000569801 MROH1Q8NDA8 1641 aa13.46□□□□□ -0.25
SNX29-208ENST00000569801 GLI3P10071 1580 aa13.46□□□□□ -0.25
SNX29-208ENST00000569801 GPR162Q16538 588 aa13.46□□□□□ -0.25
SNX29-208ENST00000569801 UNC5CLQ8IV45 518 aa13.46□□□□□ -0.25
SNX29-208ENST00000569801 GPBP1L1Q9HC44 474 aaPredicted RBP13.46□□□□□ -0.25
SNX29-208ENST00000569801 TROQ12816 1431 aaPredicted RBP13.46□□□□□ -0.26
SNX29-208ENST00000569801 CASKIN1Q8WXD9 1431 aa13.45□□□□□ -0.26
SNX29-208ENST00000569801 KIF3BO15066 747 aa13.44□□□□□ -0.26
SNX29-208ENST00000569801 ONECUT3O60422 494 aaPredicted RBP13.44□□□□□ -0.26
SNX29-208ENST00000569801 BRWD3Q6RI45 1802 aa13.43□□□□□ -0.26
SNX29-208ENST00000569801 CDK11AQ9UQ88 783 aaPredicted RBP13.43□□□□□ -0.26
SNX29-208ENST00000569801 CCDC18Q5T9S5 1454 aa13.42□□□□□ -0.26
SNX29-208ENST00000569801 FAM182BQ5T319 152 aa13.42□□□□□ -0.26
SNX29-208ENST00000569801 KLRG1Q96E93 195 aa13.42□□□□□ -0.26
SNX29-208ENST00000569801 BCANQ96GW7 911 aa13.42□□□□□ -0.26
SNX29-208ENST00000569801 TMEM2Q9UHN6 1383 aa13.42□□□□□ -0.26
SNX29-208ENST00000569801 CLIP1P30622 1438 aa13.41□□□□□ -0.26
SNX29-208ENST00000569801 CDC42BPBQ9Y5S2 1711 aa13.4□□□□□ -0.26
SNX29-208ENST00000569801 A0A0G2JS52 829 aa13.4□□□□□ -0.26
SNX29-208ENST00000569801 PPP1R15AO75807 674 aaPredicted RBP13.4□□□□□ -0.26
SNX29-208ENST00000569801 PTGER2P43116 358 aa13.4□□□□□ -0.26
SNX29-208ENST00000569801 MYT1Q01538 1121 aa13.4□□□□□ -0.26
SNX29-208ENST00000569801 ZNF777Q9ULD5 760 aaPredicted RBP13.4□□□□□ -0.26
SNX29-208ENST00000569801 FYCO1Q9BQS8 1478 aa13.4□□□□□ -0.26
SNX29-208ENST00000569801 NRKQ7Z2Y5 1582 aa13.4□□□□□ -0.26
SNX29-208ENST00000569801 ATP10DQ9P241 1426 aa13.39□□□□□ -0.27
SNX29-208ENST00000569801 TET3O43151 1660 aa13.39□□□□□ -0.27
SNX29-208ENST00000569801 APBA3O96018 575 aa13.38□□□□□ -0.27
SNX29-208ENST00000569801 UBR1Q8IWV7 1749 aa13.38□□□□□ -0.27
SNX29-208ENST00000569801 PREX2Q70Z35 1606 aa13.38□□□□□ -0.27
SNX29-208ENST00000569801 PARD3Q8TEW0 1356 aa13.37□□□□□ -0.27
SNX29-208ENST00000569801 ZBTB7AO95365 584 aa13.37□□□□□ -0.27
SNX29-208ENST00000569801 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.36□□□□□ -0.27
SNX29-208ENST00000569801 MLLT1Q03111 559 aaPredicted RBP13.36□□□□□ -0.27
SNX29-208ENST00000569801 ZNF526Q8TF50 670 aaPredicted RBP13.36□□□□□ -0.27
SNX29-208ENST00000569801 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
SNX29-208ENST00000569801 CDC42BPAQ5VT25 1732 aa13.35□□□□□ -0.27
SNX29-208ENST00000569801 ERVK-7P63135 1459 aa13.35□□□□□ -0.27
SNX29-208ENST00000569801 TRIM37O94972 964 aa13.34□□□□□ -0.27
SNX29-208ENST00000569801 CCDC9Q9Y3X0 531 aaKnown RBP13.34□□□□□ -0.27
SNX29-208ENST00000569801 GPATCH8Q9UKJ3 1502 aaKnown RBP13.34□□□□□ -0.27
SNX29-208ENST00000569801 DHX29Q7Z478 1369 aaKnown RBP13.33□□□□□ -0.27
SNX29-208ENST00000569801 HTRA3P83110 453 aa13.33□□□□□ -0.28
SNX29-208ENST00000569801 VPS72Q15906 364 aa13.32□□□□□ -0.28
SNX29-208ENST00000569801 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
SNX29-208ENST00000569801 PDGFDQ9GZP0 370 aaPredicted RBP13.32□□□□□ -0.28
SNX29-208ENST00000569801 STAG3Q9UJ98 1225 aa13.32□□□□□ -0.28
SNX29-208ENST00000569801 DLC1Q96QB1 1528 aa13.32□□□□□ -0.28
SNX29-208ENST00000569801 MST1RQ04912 1400 aa13.31□□□□□ -0.28
SNX29-208ENST00000569801 HSPA1AP0DMV8 641 aaKnown RBP13.31□□□□□ -0.28
SNX29-208ENST00000569801 HSPA1BP0DMV9 641 aaKnown RBP13.31□□□□□ -0.28
SNX29-208ENST00000569801 RGPD1P0DJD0 1748 aa13.3□□□□□ -0.28
SNX29-208ENST00000569801 SOS2Q07890 1332 aaPredicted RBP13.3□□□□□ -0.28
SNX29-208ENST00000569801 MYOM1P52179 1685 aa13.3□□□□□ -0.28
SNX29-208ENST00000569801 MYOM2P54296 1465 aa13.29□□□□□ -0.28
SNX29-208ENST00000569801 INO80Q9ULG1 1556 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms