RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 RGS17Q9UGC6 210 aaPredicted RBP23.78■■□□□ 1.4
PKD1-236ENST00000568796 CHGAP10645 457 aaKnown RBP23.77■■□□□ 1.4
PKD1-236ENST00000568796 HDGFP51858 240 aaKnown RBP23.76■■□□□ 1.39
PKD1-236ENST00000568796 MSH6P52701 1360 aa23.76■■□□□ 1.39
PKD1-236ENST00000568796 RPRD2Q5VT52 1461 aaKnown RBP23.75■■□□□ 1.39
PKD1-236ENST00000568796 NKTRP30414 1462 aaKnown RBP23.74■■□□□ 1.39
PKD1-236ENST00000568796 RIMS2Q9UQ26 1411 aa23.73■■□□□ 1.39
PKD1-236ENST00000568796 ROBO1Q9Y6N7 1651 aa23.73■■□□□ 1.39
PKD1-236ENST00000568796 NWD1Q149M9 1564 aa23.71■■□□□ 1.39
PKD1-236ENST00000568796 PLEKHG1Q9ULL1 1385 aa23.71■■□□□ 1.39
PKD1-236ENST00000568796 ZFYVE9O95405 1425 aa23.7■■□□□ 1.38
PKD1-236ENST00000568796 NUTM2DQ5VT03 806 aaPredicted RBP23.7■■□□□ 1.38
PKD1-236ENST00000568796 SLAIN2Q9P270 581 aa23.7■■□□□ 1.38
PKD1-236ENST00000568796 C14orf37Q86TY3 774 aa23.69■■□□□ 1.38
PKD1-236ENST00000568796 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.68■■□□□ 1.38
PKD1-236ENST00000568796 MYO5BQ9ULV0 1848 aa23.68■■□□□ 1.38
PKD1-236ENST00000568796 GCC2Q8IWJ2 1684 aa23.67■■□□□ 1.38
PKD1-236ENST00000568796 POTEAQ6S8J7 498 aa23.66■■□□□ 1.38
PKD1-236ENST00000568796 TBX22Q9Y458 520 aa23.65■■□□□ 1.38
PKD1-236ENST00000568796 TMEM131LA2VDJ0 1609 aa23.65■■□□□ 1.38
PKD1-236ENST00000568796 ITGAEP38570 1179 aa23.64■■□□□ 1.37
PKD1-236ENST00000568796 CHD2O14647 1828 aaKnown RBP23.62■■□□□ 1.37
PKD1-236ENST00000568796 UNC13BO14795 1591 aa23.61■■□□□ 1.37
PKD1-236ENST00000568796 PHLPP1O60346 1717 aa23.61■■□□□ 1.37
PKD1-236ENST00000568796 JCADQ9P266 1359 aa23.6■■□□□ 1.37
PKD1-236ENST00000568796 NUP155O75694 1391 aa23.59■■□□□ 1.37
PKD1-236ENST00000568796 ROCK1Q13464 1354 aa23.59■■□□□ 1.37
PKD1-236ENST00000568796 E9PCH4 1651 aa23.58■■□□□ 1.37
PKD1-236ENST00000568796 ATF3P18847 181 aa23.57■■□□□ 1.36
PKD1-236ENST00000568796 ADAMTS13Q76LX8 1427 aa23.57■■□□□ 1.36
PKD1-236ENST00000568796 NCOA3Q9Y6Q9 1424 aa23.56■■□□□ 1.36
PKD1-236ENST00000568796 CADPS2Q86UW7 1296 aa23.55■■□□□ 1.36
PKD1-236ENST00000568796 PPARGC1BQ86YN6 1023 aaKnown RBP23.54■■□□□ 1.36
PKD1-236ENST00000568796 C19orf44Q9H6X5 657 aa23.54■■□□□ 1.36
PKD1-236ENST00000568796 IQGAP3Q86VI3 1631 aa23.53■■□□□ 1.36
PKD1-236ENST00000568796 MEX3CQ5U5Q3 659 aaKnown RBP23.53■■□□□ 1.36
PKD1-236ENST00000568796 AMOTL2Q9Y2J4 779 aa23.53■■□□□ 1.36
PKD1-236ENST00000568796 PIK3R4Q99570 1358 aa23.52■■□□□ 1.36
PKD1-236ENST00000568796 DIP2AQ14689 1571 aa23.52■■□□□ 1.36
PKD1-236ENST00000568796 ZNF326Q5BKZ1 582 aaKnown RBP23.5■■□□□ 1.35
PKD1-236ENST00000568796 TRPM2O94759 1503 aa23.49■■□□□ 1.35
PKD1-236ENST00000568796 COL16A1Q07092 1604 aaPredicted RBP23.48■■□□□ 1.35
PKD1-236ENST00000568796 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.47■■□□□ 1.35
PKD1-236ENST00000568796 SPATA31A6Q5VVP1 1343 aa23.47■■□□□ 1.35
PKD1-236ENST00000568796 PTPRUQ92729 1446 aa23.46■■□□□ 1.35
PKD1-236ENST00000568796 BRINP3Q76B58 766 aa23.43■■□□□ 1.34
PKD1-236ENST00000568796 LRP6O75581 1613 aa23.43■■□□□ 1.34
PKD1-236ENST00000568796 NUTM2BA6NNL0 878 aaPredicted RBP23.42■■□□□ 1.34
PKD1-236ENST00000568796 NUTM2EB1AL46 878 aaPredicted RBP23.42■■□□□ 1.34
PKD1-236ENST00000568796 ZNF772Q68DY9 489 aaPredicted RBP23.42■■□□□ 1.34
PKD1-236ENST00000568796 NUTM2AQ8IVF1 878 aaPredicted RBP23.42■■□□□ 1.34
PKD1-236ENST00000568796 SETD1AO15047 1707 aaKnown RBP23.42■■□□□ 1.34
PKD1-236ENST00000568796 AHDC1Q5TGY3 1603 aaPredicted RBP23.41■■□□□ 1.34
PKD1-236ENST00000568796 TRIM52Q96A61 297 aa23.4■■□□□ 1.34
PKD1-236ENST00000568796 SPHKAPQ2M3C7 1700 aa23.37■■□□□ 1.33
PKD1-236ENST00000568796 METP08581 1390 aa23.37■■□□□ 1.33
PKD1-236ENST00000568796 DCCP43146 1447 aa23.36■■□□□ 1.33
PKD1-236ENST00000568796 SETBP1Q9Y6X0 1596 aa23.35■■□□□ 1.33
PKD1-236ENST00000568796 SHPRHQ149N8 1683 aa23.35■■□□□ 1.33
PKD1-236ENST00000568796 NRXN3Q9Y4C0 1643 aa23.35■■□□□ 1.33
PKD1-236ENST00000568796 XRN1Q8IZH2 1706 aaKnown RBP23.33■■□□□ 1.33
PKD1-236ENST00000568796 ASXL1Q8IXJ9 1541 aa23.33■■□□□ 1.32
PKD1-236ENST00000568796 MST1RQ04912 1400 aa23.33■■□□□ 1.32
PKD1-236ENST00000568796 RXRBP28702 533 aa23.32■■□□□ 1.32
PKD1-236ENST00000568796 DDX17Q92841 729 aaKnown RBP23.3■■□□□ 1.32
PKD1-236ENST00000568796 LRRC59Q96AG4 307 aaKnown RBP23.3■■□□□ 1.32
PKD1-236ENST00000568796 CLTCL1P53675 1640 aa23.29■■□□□ 1.32
PKD1-236ENST00000568796 SETD5Q9C0A6 1442 aa23.28■■□□□ 1.32
PKD1-236ENST00000568796 AFF2P51816 1311 aa23.28■■□□□ 1.32
PKD1-236ENST00000568796 ADGRL3Q9HAR2 1447 aa23.27■■□□□ 1.32
PKD1-236ENST00000568796 UPF1Q92900 1129 aaKnown RBP eCLIP23.27■■□□□ 1.32
PKD1-236ENST00000568796 NEXMIFQ5QGS0 1516 aa23.27■■□□□ 1.32
PKD1-236ENST00000568796 C8orf37Q96NL8 207 aa23.25■■□□□ 1.31
PKD1-236ENST00000568796 VGFO15240 615 aaPredicted RBP23.23■■□□□ 1.31
PKD1-236ENST00000568796 NAIPQ13075 1403 aa23.23■■□□□ 1.31
PKD1-236ENST00000568796 NHSL1Q5SYE7 1610 aa23.22■■□□□ 1.31
PKD1-236ENST00000568796 KIF1BO60333 1816 aa23.22■■□□□ 1.31
PKD1-236ENST00000568796 RRBP1Q9P2E9 1410 aaKnown RBP23.2■■□□□ 1.3
PKD1-236ENST00000568796 PNPLA6Q8IY17 1366 aa23.2■■□□□ 1.3
PKD1-236ENST00000568796 NALCNQ8IZF0 1738 aa23.19■■□□□ 1.3
PKD1-236ENST00000568796 C1orf167Q5SNV9 1468 aa23.19■■□□□ 1.3
PKD1-236ENST00000568796 ADAMTS2O95450 1211 aa23.19■■□□□ 1.3
PKD1-236ENST00000568796 QTRT2Q9H974 415 aaKnown RBP23.19■■□□□ 1.3
PKD1-236ENST00000568796 SLC4A1APQ9BWU0 796 aaKnown RBP23.18■■□□□ 1.3
PKD1-236ENST00000568796 NGLY1Q96IV0 654 aa23.17■■□□□ 1.3
PKD1-236ENST00000568796 ROBO2Q9HCK4 1378 aa23.16■■□□□ 1.3
PKD1-236ENST00000568796 ORAI2Q96SN7 254 aa23.16■■□□□ 1.3
PKD1-236ENST00000568796 CDK12Q9NYV4 1490 aaPredicted RBP23.16■■□□□ 1.3
PKD1-236ENST00000568796 PTCH1Q13635 1447 aa23.16■■□□□ 1.3
PKD1-236ENST00000568796 RPGRIP1LQ68CZ1 1315 aa23.15■■□□□ 1.3
PKD1-236ENST00000568796 RBM6P78332 1123 aaKnown RBP23.15■■□□□ 1.3
PKD1-236ENST00000568796 SOS2Q07890 1332 aaPredicted RBP23.1■■□□□ 1.29
PKD1-236ENST00000568796 HFM1A2PYH4 1435 aa23.1■■□□□ 1.29
PKD1-236ENST00000568796 FOXD1Q16676 465 aa23.1■■□□□ 1.29
PKD1-236ENST00000568796 RGS12O14924 1447 aa23.09■■□□□ 1.29
PKD1-236ENST00000568796 USP21Q9UK80 565 aa23.08■■□□□ 1.29
PKD1-236ENST00000568796 ESCO1Q5FWF5 840 aa23.07■■□□□ 1.28
PKD1-236ENST00000568796 RGL3Q3MIN7 710 aa23.05■■□□□ 1.28
PKD1-236ENST00000568796 STK26Q9P289 416 aa23.05■■□□□ 1.28
PKD1-236ENST00000568796 PPLO60437 1756 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms