RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 GJA5P36382 358 aa11.71□□□□□ -0.53
HERPUD1-214ENST00000568651 FAM198AQ9UFP1 575 aa11.71□□□□□ -0.53
HERPUD1-214ENST00000568651 COL9A1P20849 921 aa11.7□□□□□ -0.54
HERPUD1-214ENST00000568651 DNAJB2P25686 324 aa11.7□□□□□ -0.54
HERPUD1-214ENST00000568651 PPP2R2DQ66LE6 453 aa11.7□□□□□ -0.54
HERPUD1-214ENST00000568651 CLUAP1Q96AJ1 413 aa11.7□□□□□ -0.54
HERPUD1-214ENST00000568651 SOCS7O14512 581 aa11.69□□□□□ -0.54
HERPUD1-214ENST00000568651 SNPHO15079 494 aa11.69□□□□□ -0.54
HERPUD1-214ENST00000568651 TMEM259Q4ZIN3 620 aa11.69□□□□□ -0.54
HERPUD1-214ENST00000568651 NCAPD3P42695 1498 aa11.69□□□□□ -0.54
HERPUD1-214ENST00000568651 PROSER2Q86WR7 435 aaPredicted RBP11.68□□□□□ -0.54
HERPUD1-214ENST00000568651 TSKSQ9UJT2 592 aa11.68□□□□□ -0.54
HERPUD1-214ENST00000568651 ATP1B4Q9UN42 357 aaPredicted RBP11.68□□□□□ -0.54
HERPUD1-214ENST00000568651 TRIM6-TRIM34B2RNG4 842 aa11.67□□□□□ -0.54
HERPUD1-214ENST00000568651 RAD21O60216 631 aa11.67□□□□□ -0.54
HERPUD1-214ENST00000568651 RFC5P40937 340 aa11.67□□□□□ -0.54
HERPUD1-214ENST00000568651 SPIRE2Q8WWL2 714 aa11.67□□□□□ -0.54
HERPUD1-214ENST00000568651 SPTLC1O15269 473 aa11.66□□□□□ -0.54
HERPUD1-214ENST00000568651 PACS2Q86VP3 889 aa11.66□□□□□ -0.54
HERPUD1-214ENST00000568651 TMEM134Q9H6X4 195 aa11.66□□□□□ -0.54
HERPUD1-214ENST00000568651 ARID3CA6NKF2 412 aa11.65□□□□□ -0.54
HERPUD1-214ENST00000568651 HOXB1P14653 301 aaPredicted RBP11.65□□□□□ -0.54
HERPUD1-214ENST00000568651 NUDT18Q6ZVK8 323 aa11.65□□□□□ -0.54
HERPUD1-214ENST00000568651 RIC3Q7Z5B4 369 aa11.65□□□□□ -0.54
HERPUD1-214ENST00000568651 FNBP4Q8N3X1 1017 aaPredicted RBP11.65□□□□□ -0.54
HERPUD1-214ENST00000568651 ATAD2BQ9ULI0 1458 aa11.64□□□□□ -0.55
HERPUD1-214ENST00000568651 POTEB2H3BUK9 544 aa11.64□□□□□ -0.55
HERPUD1-214ENST00000568651 TATDN2Q93075 761 aa11.64□□□□□ -0.55
HERPUD1-214ENST00000568651 LIMD1Q9UGP4 676 aa11.64□□□□□ -0.55
HERPUD1-214ENST00000568651 NUTM1Q86Y26 1132 aa11.63□□□□□ -0.55
HERPUD1-214ENST00000568651 RSBN1LQ6PCB5 846 aaPredicted RBP11.62□□□□□ -0.55
HERPUD1-214ENST00000568651 KCNH8Q96L42 1107 aa11.61□□□□□ -0.55
HERPUD1-214ENST00000568651 PNMA3Q9UL41 463 aa11.61□□□□□ -0.55
HERPUD1-214ENST00000568651 ARID3AQ99856 593 aa11.6□□□□□ -0.55
HERPUD1-214ENST00000568651 DDX11L8A8MPP1 907 aa11.59□□□□□ -0.55
HERPUD1-214ENST00000568651 COG6Q9Y2V7 657 aa11.59□□□□□ -0.55
HERPUD1-214ENST00000568651 USP46P62068 366 aa11.58□□□□□ -0.56
HERPUD1-214ENST00000568651 RSPH4AQ5TD94 716 aa11.58□□□□□ -0.56
HERPUD1-214ENST00000568651 CCDC82Q8N4S0 544 aa11.58□□□□□ -0.56
HERPUD1-214ENST00000568651 C3orf80F5H4A9 247 aa11.57□□□□□ -0.56
HERPUD1-214ENST00000568651 PRPF38BQ5VTL8 546 aaKnown RBP11.57□□□□□ -0.56
HERPUD1-214ENST00000568651 POM121Q96HA1 1249 aa11.57□□□□□ -0.56
HERPUD1-214ENST00000568651 LILRB3O75022 631 aa11.56□□□□□ -0.56
HERPUD1-214ENST00000568651 SMARCA2P51531 1590 aa11.56□□□□□ -0.56
HERPUD1-214ENST00000568651 MOXD2PA6NHM9 499 aa11.55□□□□□ -0.56
HERPUD1-214ENST00000568651 SNRKQ9NRH2 765 aa11.55□□□□□ -0.56
HERPUD1-214ENST00000568651 SERPINA10Q9UK55 444 aa11.55□□□□□ -0.56
HERPUD1-214ENST00000568651 FBXO31Q5XUX0 539 aaPredicted RBP11.54□□□□□ -0.56
HERPUD1-214ENST00000568651 PRM3Q9NNZ6 103 aa11.54□□□□□ -0.56
HERPUD1-214ENST00000568651 THOC2Q8NI27 1593 aaKnown RBP11.54□□□□□ -0.56
HERPUD1-214ENST00000568651 KDM4AO75164 1064 aa11.53□□□□□ -0.56
HERPUD1-214ENST00000568651 WWC1Q8IX03 1113 aa11.53□□□□□ -0.56
HERPUD1-214ENST00000568651 MTMR14Q8NCE2 650 aa11.53□□□□□ -0.56
HERPUD1-214ENST00000568651 KCNK17Q96T54 332 aa11.53□□□□□ -0.56
HERPUD1-214ENST00000568651 SLC4A5Q9BY07 1137 aa11.53□□□□□ -0.56
HERPUD1-214ENST00000568651 RDH13Q8NBN7 331 aa11.52□□□□□ -0.57
HERPUD1-214ENST00000568651 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
HERPUD1-214ENST00000568651 BAZ1BQ9UIG0 1483 aaKnown RBP11.51□□□□□ -0.57
HERPUD1-214ENST00000568651 HMGXB3Q12766 1538 aa11.51□□□□□ -0.57
HERPUD1-214ENST00000568651 GCGRP47871 477 aa11.51□□□□□ -0.57
HERPUD1-214ENST00000568651 PROX2Q3B8N5 592 aa11.51□□□□□ -0.57
HERPUD1-214ENST00000568651 CCDC97Q96F63 343 aaPredicted RBP11.5□□□□□ -0.57
HERPUD1-214ENST00000568651 ZNF777Q9ULD5 760 aaPredicted RBP11.5□□□□□ -0.57
HERPUD1-214ENST00000568651 QPCTQ16769 361 aa11.49□□□□□ -0.57
HERPUD1-214ENST00000568651 ZBTB3Q9H5J0 574 aa11.49□□□□□ -0.57
HERPUD1-214ENST00000568651 PLSCR2Q9NRY7 297 aa11.49□□□□□ -0.57
HERPUD1-214ENST00000568651 KIAA1468Q9P260 1216 aa11.49□□□□□ -0.57
HERPUD1-214ENST00000568651 RABGEF1Q9UJ41 708 aa11.49□□□□□ -0.57
HERPUD1-214ENST00000568651 HOXA2O43364 376 aa11.48□□□□□ -0.57
HERPUD1-214ENST00000568651 NDUFV2P19404 249 aa11.48□□□□□ -0.57
HERPUD1-214ENST00000568651 ZNF330Q9Y3S2 320 aaPredicted RBP11.48□□□□□ -0.57
HERPUD1-214ENST00000568651 SMARCA4P51532 1647 aa11.48□□□□□ -0.57
HERPUD1-214ENST00000568651 SMAPO00193 183 aa11.47□□□□□ -0.57
HERPUD1-214ENST00000568651 SLC4A3P48751 1232 aa11.47□□□□□ -0.57
HERPUD1-214ENST00000568651 PCDHB15Q9Y5E8 787 aa11.47□□□□□ -0.57
HERPUD1-214ENST00000568651 PDS5BQ9NTI5 1447 aa11.46□□□□□ -0.57
HERPUD1-214ENST00000568651 NUTM2BA6NNL0 878 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-214ENST00000568651 NUTM2EB1AL46 878 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-214ENST00000568651 USP17L8P0C7I0 530 aa11.45□□□□□ -0.58
HERPUD1-214ENST00000568651 CSPP1Q1MSJ5 1256 aa11.45□□□□□ -0.58
HERPUD1-214ENST00000568651 RTL5Q5HYW3 569 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-214ENST00000568651 NUTM2DQ5VT03 806 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-214ENST00000568651 NUTM2AQ8IVF1 878 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-214ENST00000568651 ARHGAP33O14559 1287 aa11.44□□□□□ -0.58
HERPUD1-214ENST00000568651 AP1G2O75843 785 aa11.44□□□□□ -0.58
HERPUD1-214ENST00000568651 FDX1P10109 184 aa11.44□□□□□ -0.58
HERPUD1-214ENST00000568651 PBX2P40425 430 aa11.44□□□□□ -0.58
HERPUD1-214ENST00000568651 GDPD2Q9HCC8 539 aa11.44□□□□□ -0.58
HERPUD1-214ENST00000568651 HRCP23327 699 aa11.43□□□□□ -0.58
HERPUD1-214ENST00000568651 HDGFP51858 240 aaKnown RBP11.43□□□□□ -0.58
HERPUD1-214ENST00000568651 SWT1Q5T5J6 900 aaKnown RBP11.43□□□□□ -0.58
HERPUD1-214ENST00000568651 LAMC3Q9Y6N6 1575 aa11.42□□□□□ -0.58
HERPUD1-214ENST00000568651 SLC10A3P09131 477 aa11.42□□□□□ -0.58
HERPUD1-214ENST00000568651 PDIA4P13667 645 aaKnown RBP11.42□□□□□ -0.58
HERPUD1-214ENST00000568651 FAM98CQ17RN3 349 aaKnown RBP11.42□□□□□ -0.58
HERPUD1-214ENST00000568651 KIF21AQ7Z4S6 1674 aa11.41□□□□□ -0.58
HERPUD1-214ENST00000568651 GRIPAP1Q4V328 841 aa11.41□□□□□ -0.58
HERPUD1-214ENST00000568651 LAPTM4BQ86VI4 370 aa11.41□□□□□ -0.58
HERPUD1-214ENST00000568651 SLF2Q8IX21 1173 aa11.41□□□□□ -0.58
HERPUD1-214ENST00000568651 CABLES1Q8TDN4 633 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms