RNA–Protein interactions for RNA: ENST00000567883.5

FANCA-227, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-227ENST00000567883 ANKRD50Q9ULJ7 1429 aa17.22■□□□□ 0.35
FANCA-227ENST00000567883 CHD2O14647 1828 aaKnown RBP17.22■□□□□ 0.35
FANCA-227ENST00000567883 ZFYVE9O95405 1425 aa17.21■□□□□ 0.35
FANCA-227ENST00000567883 HDGFP51858 240 aaKnown RBP17.21■□□□□ 0.35
FANCA-227ENST00000567883 MYO5BQ9ULV0 1848 aa17.21■□□□□ 0.35
FANCA-227ENST00000567883 MSH6P52701 1360 aa17.2■□□□□ 0.34
FANCA-227ENST00000567883 PLEKHG1Q9ULL1 1385 aa17.2■□□□□ 0.34
FANCA-227ENST00000567883 RBM33Q96EV2 1170 aaKnown RBP17.2■□□□□ 0.34
FANCA-227ENST00000567883 BCANQ96GW7 911 aa17.19■□□□□ 0.34
FANCA-227ENST00000567883 GCC2Q8IWJ2 1684 aa17.19■□□□□ 0.34
FANCA-227ENST00000567883 TMEM131LA2VDJ0 1609 aa17.18■□□□□ 0.34
FANCA-227ENST00000567883 FAM50AQ14320 339 aaKnown RBP17.18■□□□□ 0.34
FANCA-227ENST00000567883 SLAIN2Q9P270 581 aa17.18■□□□□ 0.34
FANCA-227ENST00000567883 POTEAQ6S8J7 498 aa17.17■□□□□ 0.34
FANCA-227ENST00000567883 RIMS2Q9UQ26 1411 aa17.17■□□□□ 0.34
FANCA-227ENST00000567883 TBX22Q9Y458 520 aa17.17■□□□□ 0.34
FANCA-227ENST00000567883 NCOA3Q9Y6Q9 1424 aa17.17■□□□□ 0.34
FANCA-227ENST00000567883 UNC13BO14795 1591 aa17.15■□□□□ 0.34
FANCA-227ENST00000567883 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.15■□□□□ 0.34
FANCA-227ENST00000567883 PHLPP1O60346 1717 aa17.15■□□□□ 0.34
FANCA-227ENST00000567883 PPP1R15AO75807 674 aaPredicted RBP17.14■□□□□ 0.33
FANCA-227ENST00000567883 JCADQ9P266 1359 aa17.13■□□□□ 0.33
FANCA-227ENST00000567883 E9PCH4 1651 aa17.12■□□□□ 0.33
FANCA-227ENST00000567883 PIK3R4Q99570 1358 aa17.11■□□□□ 0.33
FANCA-227ENST00000567883 DIP2AQ14689 1571 aa17.11■□□□□ 0.33
FANCA-227ENST00000567883 ROCK1Q13464 1354 aa17.1■□□□□ 0.33
FANCA-227ENST00000567883 ADAMTS13Q76LX8 1427 aa17.1■□□□□ 0.33
FANCA-227ENST00000567883 COL16A1Q07092 1604 aaPredicted RBP17.1■□□□□ 0.33
FANCA-227ENST00000567883 IQGAP3Q86VI3 1631 aa17.09■□□□□ 0.33
FANCA-227ENST00000567883 CHGAP10645 457 aaKnown RBP17.08■□□□□ 0.32
FANCA-227ENST00000567883 C19orf44Q9H6X5 657 aa17.08■□□□□ 0.32
FANCA-227ENST00000567883 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.07■□□□□ 0.32
FANCA-227ENST00000567883 CADPS2Q86UW7 1296 aa17.07■□□□□ 0.32
FANCA-227ENST00000567883 SPATA31A6Q5VVP1 1343 aa17.06■□□□□ 0.32
FANCA-227ENST00000567883 C14orf37Q86TY3 774 aa17.05■□□□□ 0.32
FANCA-227ENST00000567883 AHDC1Q5TGY3 1603 aaPredicted RBP17.05■□□□□ 0.32
FANCA-227ENST00000567883 ATF3P18847 181 aa17.04■□□□□ 0.32
FANCA-227ENST00000567883 TRPM2O94759 1503 aa17.04■□□□□ 0.32
FANCA-227ENST00000567883 NUTM2DQ5VT03 806 aaPredicted RBP17.03■□□□□ 0.32
FANCA-227ENST00000567883 SHPRHQ149N8 1683 aa17.03■□□□□ 0.32
FANCA-227ENST00000567883 NUP155O75694 1391 aa17.02■□□□□ 0.32
FANCA-227ENST00000567883 AMOTL2Q9Y2J4 779 aa17.02■□□□□ 0.32
FANCA-227ENST00000567883 LRP6O75581 1613 aa17.01■□□□□ 0.31
FANCA-227ENST00000567883 SETD1AO15047 1707 aaKnown RBP17■□□□□ 0.31
FANCA-227ENST00000567883 DCCP43146 1447 aa17■□□□□ 0.31
FANCA-227ENST00000567883 ZNF772Q68DY9 489 aaPredicted RBP17■□□□□ 0.31
FANCA-227ENST00000567883 PTPRUQ92729 1446 aa17■□□□□ 0.31
FANCA-227ENST00000567883 SETBP1Q9Y6X0 1596 aa16.98■□□□□ 0.31
FANCA-227ENST00000567883 NRXN3Q9Y4C0 1643 aa16.98■□□□□ 0.31
FANCA-227ENST00000567883 XRN1Q8IZH2 1706 aaKnown RBP16.98■□□□□ 0.31
FANCA-227ENST00000567883 SPHKAPQ2M3C7 1700 aa16.97■□□□□ 0.31
FANCA-227ENST00000567883 MEX3CQ5U5Q3 659 aaKnown RBP16.97■□□□□ 0.31
FANCA-227ENST00000567883 BRINP3Q76B58 766 aa16.97■□□□□ 0.31
FANCA-227ENST00000567883 SETD5Q9C0A6 1442 aa16.93■□□□□ 0.3
FANCA-227ENST00000567883 NHSL1Q5SYE7 1610 aa16.92■□□□□ 0.3
FANCA-227ENST00000567883 ASXL1Q8IXJ9 1541 aa16.92■□□□□ 0.3
FANCA-227ENST00000567883 ITGAEP38570 1179 aa16.92■□□□□ 0.3
FANCA-227ENST00000567883 MST1RQ04912 1400 aa16.92■□□□□ 0.3
FANCA-227ENST00000567883 METP08581 1390 aa16.91■□□□□ 0.3
FANCA-227ENST00000567883 ZNF326Q5BKZ1 582 aaKnown RBP16.91■□□□□ 0.3
FANCA-227ENST00000567883 UPF1Q92900 1129 aaKnown RBP eCLIP16.91■□□□□ 0.3
FANCA-227ENST00000567883 RXRBP28702 533 aa16.9■□□□□ 0.3
FANCA-227ENST00000567883 LRRC59Q96AG4 307 aaKnown RBP16.9■□□□□ 0.3
FANCA-227ENST00000567883 CDK12Q9NYV4 1490 aaPredicted RBP16.9■□□□□ 0.3
FANCA-227ENST00000567883 ADGRL3Q9HAR2 1447 aa16.88■□□□□ 0.29
FANCA-227ENST00000567883 NEXMIFQ5QGS0 1516 aa16.88■□□□□ 0.29
FANCA-227ENST00000567883 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
FANCA-227ENST00000567883 KIF1BO60333 1816 aa16.87■□□□□ 0.29
FANCA-227ENST00000567883 NUTM2BA6NNL0 878 aaPredicted RBP16.87■□□□□ 0.29
FANCA-227ENST00000567883 NUTM2EB1AL46 878 aaPredicted RBP16.87■□□□□ 0.29
FANCA-227ENST00000567883 NUTM2AQ8IVF1 878 aaPredicted RBP16.87■□□□□ 0.29
FANCA-227ENST00000567883 CLTCL1P53675 1640 aa16.87■□□□□ 0.29
FANCA-227ENST00000567883 NALCNQ8IZF0 1738 aa16.86■□□□□ 0.29
FANCA-227ENST00000567883 AFF2P51816 1311 aa16.86■□□□□ 0.29
FANCA-227ENST00000567883 LAMC1P11047 1609 aa16.83■□□□□ 0.28
FANCA-227ENST00000567883 PNPLA6Q8IY17 1366 aa16.83■□□□□ 0.28
FANCA-227ENST00000567883 SRCAPQ6ZRS2 3230 aa16.81■□□□□ 0.28
FANCA-227ENST00000567883 C1orf167Q5SNV9 1468 aa16.81■□□□□ 0.28
FANCA-227ENST00000567883 PTCH1Q13635 1447 aa16.81■□□□□ 0.28
FANCA-227ENST00000567883 VGFO15240 615 aaPredicted RBP16.81■□□□□ 0.28
FANCA-227ENST00000567883 NAIPQ13075 1403 aa16.8■□□□□ 0.28
FANCA-227ENST00000567883 RBM6P78332 1123 aaKnown RBP16.8■□□□□ 0.28
FANCA-227ENST00000567883 PPARGC1BQ86YN6 1023 aaKnown RBP16.8■□□□□ 0.28
FANCA-227ENST00000567883 DDX17Q92841 729 aaKnown RBP16.8■□□□□ 0.28
FANCA-227ENST00000567883 QTRT2Q9H974 415 aaKnown RBP16.8■□□□□ 0.28
FANCA-227ENST00000567883 PRAG1Q86YV5 1406 aa16.79■□□□□ 0.28
FANCA-227ENST00000567883 RRBP1Q9P2E9 1410 aaKnown RBP16.79■□□□□ 0.28
FANCA-227ENST00000567883 C8orf37Q96NL8 207 aa16.79■□□□□ 0.28
FANCA-227ENST00000567883 RPGRIP1LQ68CZ1 1315 aa16.78■□□□□ 0.28
FANCA-227ENST00000567883 SOS2Q07890 1332 aaPredicted RBP16.77■□□□□ 0.28
FANCA-227ENST00000567883 ROBO2Q9HCK4 1378 aa16.77■□□□□ 0.27
FANCA-227ENST00000567883 RGS12O14924 1447 aa16.76■□□□□ 0.27
FANCA-227ENST00000567883 NGLY1Q96IV0 654 aa16.75■□□□□ 0.27
FANCA-227ENST00000567883 ORAI2Q96SN7 254 aa16.75■□□□□ 0.27
FANCA-227ENST00000567883 HFM1A2PYH4 1435 aa16.75■□□□□ 0.27
FANCA-227ENST00000567883 PPLO60437 1756 aa16.74■□□□□ 0.27
FANCA-227ENST00000567883 EP400Q96L91 3159 aa16.74■□□□□ 0.27
FANCA-227ENST00000567883 ADAMTS2O95450 1211 aa16.73■□□□□ 0.27
FANCA-227ENST00000567883 COL22A1Q8NFW1 1626 aaPredicted RBP16.72■□□□□ 0.27
FANCA-227ENST00000567883 FNBP4Q8N3X1 1017 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms