RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 NKTRP30414 1462 aaKnown RBP20.92■□□□□ 0.94
COMMD4-214ENST00000566230 ADGRL2O95490 1459 aa20.91■□□□□ 0.94
COMMD4-214ENST00000566230 CHD2O14647 1828 aaKnown RBP20.9■□□□□ 0.94
COMMD4-214ENST00000566230 ZFYVE9O95405 1425 aa20.88■□□□□ 0.93
COMMD4-214ENST00000566230 BCANQ96GW7 911 aa20.87■□□□□ 0.93
COMMD4-214ENST00000566230 SLAIN2Q9P270 581 aa20.87■□□□□ 0.93
COMMD4-214ENST00000566230 RPRD2Q5VT52 1461 aaKnown RBP20.87■□□□□ 0.93
COMMD4-214ENST00000566230 GCC2Q8IWJ2 1684 aa20.86■□□□□ 0.93
COMMD4-214ENST00000566230 MSH6P52701 1360 aa20.86■□□□□ 0.93
COMMD4-214ENST00000566230 PHLPP1O60346 1717 aa20.86■□□□□ 0.93
COMMD4-214ENST00000566230 PLEKHG1Q9ULL1 1385 aa20.85■□□□□ 0.93
COMMD4-214ENST00000566230 ANKRD50Q9ULJ7 1429 aa20.85■□□□□ 0.93
COMMD4-214ENST00000566230 TMEM131LA2VDJ0 1609 aa20.85■□□□□ 0.93
COMMD4-214ENST00000566230 RIMS2Q9UQ26 1411 aa20.84■□□□□ 0.93
COMMD4-214ENST00000566230 FAM50AQ14320 339 aaKnown RBP20.82■□□□□ 0.92
COMMD4-214ENST00000566230 TBX22Q9Y458 520 aa20.8■□□□□ 0.92
COMMD4-214ENST00000566230 JCADQ9P266 1359 aa20.8■□□□□ 0.92
COMMD4-214ENST00000566230 COL16A1Q07092 1604 aaPredicted RBP20.79■□□□□ 0.92
COMMD4-214ENST00000566230 PPP1R15AO75807 674 aaPredicted RBP20.79■□□□□ 0.92
COMMD4-214ENST00000566230 SETD1AO15047 1707 aaKnown RBP20.78■□□□□ 0.92
COMMD4-214ENST00000566230 HDGFP51858 240 aaKnown RBP20.78■□□□□ 0.92
COMMD4-214ENST00000566230 ADAMTS13Q76LX8 1427 aa20.77■□□□□ 0.91
COMMD4-214ENST00000566230 E9PCH4 1651 aa20.77■□□□□ 0.91
COMMD4-214ENST00000566230 UNC13BO14795 1591 aa20.76■□□□□ 0.91
COMMD4-214ENST00000566230 NCOA3Q9Y6Q9 1424 aa20.76■□□□□ 0.91
COMMD4-214ENST00000566230 NUTM2DQ5VT03 806 aaPredicted RBP20.75■□□□□ 0.91
COMMD4-214ENST00000566230 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.75■□□□□ 0.91
COMMD4-214ENST00000566230 CHGAP10645 457 aaKnown RBP20.74■□□□□ 0.91
COMMD4-214ENST00000566230 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.74■□□□□ 0.91
COMMD4-214ENST00000566230 LRP6O75581 1613 aa20.72■□□□□ 0.91
COMMD4-214ENST00000566230 C14orf37Q86TY3 774 aa20.71■□□□□ 0.91
COMMD4-214ENST00000566230 C19orf44Q9H6X5 657 aa20.7■□□□□ 0.9
COMMD4-214ENST00000566230 DIP2AQ14689 1571 aa20.7■□□□□ 0.9
COMMD4-214ENST00000566230 AHDC1Q5TGY3 1603 aaPredicted RBP20.7■□□□□ 0.9
COMMD4-214ENST00000566230 PIK3R4Q99570 1358 aa20.7■□□□□ 0.9
COMMD4-214ENST00000566230 IQGAP3Q86VI3 1631 aa20.69■□□□□ 0.9
COMMD4-214ENST00000566230 SPATA31A6Q5VVP1 1343 aa20.69■□□□□ 0.9
COMMD4-214ENST00000566230 CADPS2Q86UW7 1296 aa20.68■□□□□ 0.9
COMMD4-214ENST00000566230 SHPRHQ149N8 1683 aa20.67■□□□□ 0.9
COMMD4-214ENST00000566230 PTPRUQ92729 1446 aa20.67■□□□□ 0.9
COMMD4-214ENST00000566230 ATF3P18847 181 aa20.66■□□□□ 0.9
COMMD4-214ENST00000566230 AMOTL2Q9Y2J4 779 aa20.66■□□□□ 0.9
COMMD4-214ENST00000566230 TRPM2O94759 1503 aa20.65■□□□□ 0.9
COMMD4-214ENST00000566230 ROCK1Q13464 1354 aa20.65■□□□□ 0.9
COMMD4-214ENST00000566230 MEX3CQ5U5Q3 659 aaKnown RBP20.63■□□□□ 0.89
COMMD4-214ENST00000566230 BRINP3Q76B58 766 aa20.63■□□□□ 0.89
COMMD4-214ENST00000566230 ZNF772Q68DY9 489 aaPredicted RBP20.62■□□□□ 0.89
COMMD4-214ENST00000566230 NRXN3Q9Y4C0 1643 aa20.62■□□□□ 0.89
COMMD4-214ENST00000566230 NUP155O75694 1391 aa20.61■□□□□ 0.89
COMMD4-214ENST00000566230 UPF1Q92900 1129 aaKnown RBP eCLIP20.6■□□□□ 0.89
COMMD4-214ENST00000566230 XRN1Q8IZH2 1706 aaKnown RBP20.6■□□□□ 0.89
COMMD4-214ENST00000566230 TRIM52Q96A61 297 aa20.59■□□□□ 0.89
COMMD4-214ENST00000566230 DCCP43146 1447 aa20.57■□□□□ 0.88
COMMD4-214ENST00000566230 SETBP1Q9Y6X0 1596 aa20.57■□□□□ 0.88
COMMD4-214ENST00000566230 SPHKAPQ2M3C7 1700 aa20.56■□□□□ 0.88
COMMD4-214ENST00000566230 NUTM2BA6NNL0 878 aaPredicted RBP20.56■□□□□ 0.88
COMMD4-214ENST00000566230 NUTM2EB1AL46 878 aaPredicted RBP20.56■□□□□ 0.88
COMMD4-214ENST00000566230 NUTM2AQ8IVF1 878 aaPredicted RBP20.56■□□□□ 0.88
COMMD4-214ENST00000566230 ASXL1Q8IXJ9 1541 aa20.56■□□□□ 0.88
COMMD4-214ENST00000566230 MST1RQ04912 1400 aa20.55■□□□□ 0.88
COMMD4-214ENST00000566230 NHSL1Q5SYE7 1610 aa20.55■□□□□ 0.88
COMMD4-214ENST00000566230 RXRBP28702 533 aa20.54■□□□□ 0.88
COMMD4-214ENST00000566230 METP08581 1390 aa20.54■□□□□ 0.88
COMMD4-214ENST00000566230 SETD5Q9C0A6 1442 aa20.53■□□□□ 0.88
COMMD4-214ENST00000566230 ITGAEP38570 1179 aa20.53■□□□□ 0.88
COMMD4-214ENST00000566230 AFF2P51816 1311 aa20.51■□□□□ 0.87
COMMD4-214ENST00000566230 CDK12Q9NYV4 1490 aaPredicted RBP20.5■□□□□ 0.87
COMMD4-214ENST00000566230 ZNF326Q5BKZ1 582 aaKnown RBP20.5■□□□□ 0.87
COMMD4-214ENST00000566230 DDX17Q92841 729 aaKnown RBP20.5■□□□□ 0.87
COMMD4-214ENST00000566230 NALCNQ8IZF0 1738 aa20.48■□□□□ 0.87
COMMD4-214ENST00000566230 LRRC59Q96AG4 307 aaKnown RBP20.48■□□□□ 0.87
COMMD4-214ENST00000566230 ADGRL3Q9HAR2 1447 aa20.47■□□□□ 0.87
COMMD4-214ENST00000566230 CLTCL1P53675 1640 aa20.47■□□□□ 0.87
COMMD4-214ENST00000566230 NEXMIFQ5QGS0 1516 aa20.47■□□□□ 0.87
COMMD4-214ENST00000566230 PNPLA6Q8IY17 1366 aa20.46■□□□□ 0.87
COMMD4-214ENST00000566230 PPARGC1BQ86YN6 1023 aaKnown RBP20.43■□□□□ 0.86
COMMD4-214ENST00000566230 C8orf37Q96NL8 207 aa20.43■□□□□ 0.86
COMMD4-214ENST00000566230 KIF1BO60333 1816 aa20.43■□□□□ 0.86
COMMD4-214ENST00000566230 QTRT2Q9H974 415 aaKnown RBP20.42■□□□□ 0.86
COMMD4-214ENST00000566230 RGS12O14924 1447 aa20.41■□□□□ 0.86
COMMD4-214ENST00000566230 C1orf167Q5SNV9 1468 aa20.41■□□□□ 0.86
COMMD4-214ENST00000566230 LAMC1P11047 1609 aa20.41■□□□□ 0.86
COMMD4-214ENST00000566230 RBM6P78332 1123 aaKnown RBP20.4■□□□□ 0.86
COMMD4-214ENST00000566230 ROBO2Q9HCK4 1378 aa20.36■□□□□ 0.85
COMMD4-214ENST00000566230 ADAMTS2O95450 1211 aa20.36■□□□□ 0.85
COMMD4-214ENST00000566230 NGLY1Q96IV0 654 aa20.36■□□□□ 0.85
COMMD4-214ENST00000566230 ORAI2Q96SN7 254 aa20.36■□□□□ 0.85
COMMD4-214ENST00000566230 PTCH1Q13635 1447 aa20.36■□□□□ 0.85
COMMD4-214ENST00000566230 SOS2Q07890 1332 aaPredicted RBP20.35■□□□□ 0.85
COMMD4-214ENST00000566230 NAIPQ13075 1403 aa20.33■□□□□ 0.84
COMMD4-214ENST00000566230 VGFO15240 615 aaPredicted RBP20.32■□□□□ 0.84
COMMD4-214ENST00000566230 PRAG1Q86YV5 1406 aa20.31■□□□□ 0.84
COMMD4-214ENST00000566230 PPLO60437 1756 aa20.29■□□□□ 0.84
COMMD4-214ENST00000566230 USP21Q9UK80 565 aa20.29■□□□□ 0.84
COMMD4-214ENST00000566230 COL22A1Q8NFW1 1626 aaPredicted RBP20.28■□□□□ 0.84
COMMD4-214ENST00000566230 FNBP4Q8N3X1 1017 aaPredicted RBP20.28■□□□□ 0.84
COMMD4-214ENST00000566230 RPGRIP1LQ68CZ1 1315 aa20.27■□□□□ 0.84
COMMD4-214ENST00000566230 RRBP1Q9P2E9 1410 aaKnown RBP20.27■□□□□ 0.84
COMMD4-214ENST00000566230 HFM1A2PYH4 1435 aa20.27■□□□□ 0.83
COMMD4-214ENST00000566230 TRPC5Q9UL62 973 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms