RNA–Protein interactions for RNA: ENST00000565684.5

KIFC3-223, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-223	ENST00000565684	PLEKHG1	Q9ULL1	1385 aa		34.28	■■■■□ 3.08
KIFC3-223	ENST00000565684	SLC26A8	Q96RN1	970 aa		34.28	■■■■□ 3.08
KIFC3-223	ENST00000565684	TOM1	O60784	492 aa		34.26	■■■■□ 3.08
KIFC3-223	ENST00000565684	CLTCL1	P53675	1640 aa		34.26	■■■■□ 3.07
KIFC3-223	ENST00000565684	CHGA	P10645	457 aa	Known RBP	34.25	■■■■□ 3.07
KIFC3-223	ENST00000565684	TRPM2	O94759	1503 aa		34.25	■■■■□ 3.07
KIFC3-223	ENST00000565684	CHD2	O14647	1828 aa	Known RBP	34.24	■■■■□ 3.07
KIFC3-223	ENST00000565684	PIP4K2B	P78356	416 aa		34.21	■■■■□ 3.07
KIFC3-223	ENST00000565684	SENP3	Q9H4L4	574 aa	Predicted RBP	34.19	■■■■□ 3.06
KIFC3-223	ENST00000565684	KCNA6	P17658	529 aa		34.18	■■■■□ 3.06
KIFC3-223	ENST00000565684	NKTR	P30414	1462 aa	Known RBP	34.18	■■■■□ 3.06
KIFC3-223	ENST00000565684	PPP1R15A	O75807	674 aa	Predicted RBP	34.17	■■■■□ 3.06
KIFC3-223	ENST00000565684	SCAF1	Q9H7N4	1312 aa	Known RBP	34.17	■■■■□ 3.06
KIFC3-223	ENST00000565684	DIP2A	Q14689	1571 aa		34.16	■■■■□ 3.06
KIFC3-223	ENST00000565684	ADAMTS13	Q76LX8	1427 aa		34.16	■■■■□ 3.06
KIFC3-223	ENST00000565684	HDGF	P51858	240 aa	Known RBP	34.16	■■■■□ 3.06
KIFC3-223	ENST00000565684	KIF1B	O60333	1816 aa		34.16	■■■■□ 3.06
KIFC3-223	ENST00000565684	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	34.15	■■■■□ 3.06
KIFC3-223	ENST00000565684	NUTM2D	Q5VT03	806 aa	Predicted RBP	34.14	■■■■□ 3.06
KIFC3-223	ENST00000565684	BCAN	Q96GW7	911 aa		34.14	■■■■□ 3.06
KIFC3-223	ENST00000565684	NRXN3	Q9Y4C0	1643 aa		34.14	■■■■□ 3.06
KIFC3-223	ENST00000565684	TMEM94	Q12767	1356 aa		34.12	■■■■□ 3.05
KIFC3-223	ENST00000565684	TRIM52	Q96A61	297 aa		34.11	■■■■□ 3.05
KIFC3-223	ENST00000565684	HSPA1L	P34931	641 aa		34.1	■■■■□ 3.05
KIFC3-223	ENST00000565684	NEXMIF	Q5QGS0	1516 aa		34.09	■■■■□ 3.05
KIFC3-223	ENST00000565684	TBX22	Q9Y458	520 aa		34.07	■■■■□ 3.04
KIFC3-223	ENST00000565684	SETBP1	Q9Y6X0	1596 aa		34.06	■■■■□ 3.04
KIFC3-223	ENST00000565684	PROSER2	Q86WR7	435 aa	Predicted RBP	34.04	■■■■□ 3.04
KIFC3-223	ENST00000565684	RBM33	Q96EV2	1170 aa	Known RBP	34.04	■■■■□ 3.04
KIFC3-223	ENST00000565684	SLC4A1AP	Q9BWU0	796 aa	Known RBP	34.03	■■■■□ 3.04
KIFC3-223	ENST00000565684	DISP3	Q9P2K9	1392 aa		34.02	■■■■□ 3.04
KIFC3-223	ENST00000565684	PIK3R4	Q99570	1358 aa		33.99	■■■■□ 3.03
KIFC3-223	ENST00000565684	ZNF326	Q5BKZ1	582 aa	Known RBP	33.98	■■■■□ 3.03
KIFC3-223	ENST00000565684	XRN1	Q8IZH2	1706 aa	Known RBP	33.97	■■■■□ 3.03
KIFC3-223	ENST00000565684	PTPRU	Q92729	1446 aa		33.96	■■■■□ 3.03
KIFC3-223	ENST00000565684	ROBO1	Q9Y6N7	1651 aa		33.94	■■■■□ 3.02
KIFC3-223	ENST00000565684	PPL	O60437	1756 aa		33.94	■■■■□ 3.02
KIFC3-223	ENST00000565684	FOXD1	Q16676	465 aa		33.92	■■■■□ 3.02
KIFC3-223	ENST00000565684	MED1	Q15648	1581 aa	Predicted RBP	33.92	■■■■□ 3.02
KIFC3-223	ENST00000565684	SETD1A	O15047	1707 aa	Known RBP	33.92	■■■■□ 3.02
KIFC3-223	ENST00000565684	FAM135B	Q49AJ0	1406 aa		33.9	■■■■□ 3.02
KIFC3-223	ENST00000565684	MSH6	P52701	1360 aa		33.9	■■■■□ 3.02
KIFC3-223	ENST00000565684	SETD5	Q9C0A6	1442 aa		33.88	■■■■□ 3.01
KIFC3-223	ENST00000565684	NCOA3	Q9Y6Q9	1424 aa		33.88	■■■■□ 3.01
KIFC3-223	ENST00000565684	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33.88	■■■■□ 3.01
KIFC3-223	ENST00000565684	MPHOSPH9	Q99550	1183 aa		33.86	■■■■□ 3.01
KIFC3-223	ENST00000565684	MET	P08581	1390 aa		33.85	■■■■□ 3.01
KIFC3-223	ENST00000565684	AMOTL2	Q9Y2J4	779 aa		33.84	■■■■□ 3.01
KIFC3-223	ENST00000565684	IFT172	Q9UG01	1749 aa		33.84	■■■■□ 3.01
KIFC3-223	ENST00000565684	ILDR2	Q71H61	639 aa		33.82	■■■■□ 3
KIFC3-223	ENST00000565684	CCDC144A	A2RUR9	1427 aa		33.79	■■■■□ 3
KIFC3-223	ENST00000565684	RAB3GAP2	Q9H2M9	1393 aa		33.78	■■■■□ 3
KIFC3-223	ENST00000565684	SPATA31E1	Q6ZUB1	1445 aa		33.78	■■■■□ 3
KIFC3-223	ENST00000565684	RPGRIP1L	Q68CZ1	1315 aa		33.77	■■■■□ 3
KIFC3-223	ENST00000565684	SLAIN2	Q9P270	581 aa		33.74	■■■□□ 2.99
KIFC3-223	ENST00000565684	NALCN	Q8IZF0	1738 aa		33.73	■■■□□ 2.99
KIFC3-223	ENST00000565684	VGF	O15240	615 aa	Predicted RBP	33.73	■■■□□ 2.99
KIFC3-223	ENST00000565684	ACIN1	Q9UKV3	1341 aa	Known RBP	33.73	■■■□□ 2.99
KIFC3-223	ENST00000565684	PHLPP1	O60346	1717 aa		33.73	■■■□□ 2.99
KIFC3-223	ENST00000565684	C14orf37	Q86TY3	774 aa		33.71	■■■□□ 2.99
KIFC3-223	ENST00000565684	C19orf44	Q9H6X5	657 aa		33.7	■■■□□ 2.99
KIFC3-223	ENST00000565684	DCC	P43146	1447 aa		33.68	■■■□□ 2.98
KIFC3-223	ENST00000565684	COL16A1	Q07092	1604 aa	Predicted RBP	33.65	■■■□□ 2.98
KIFC3-223	ENST00000565684	PRAG1	Q86YV5	1406 aa		33.65	■■■□□ 2.98
KIFC3-223	ENST00000565684	CADPS2	Q86UW7	1296 aa		33.65	■■■□□ 2.98
KIFC3-223	ENST00000565684	PTCH1	Q13635	1447 aa		33.63	■■■□□ 2.97
KIFC3-223	ENST00000565684	ADGRL3	Q9HAR2	1447 aa		33.62	■■■□□ 2.97
KIFC3-223	ENST00000565684	ADGRF5	Q8IZF2	1346 aa		33.62	■■■□□ 2.97
KIFC3-223	ENST00000565684	ATF3	P18847	181 aa		33.62	■■■□□ 2.97
KIFC3-223	ENST00000565684	RGL3	Q3MIN7	710 aa		33.61	■■■□□ 2.97
KIFC3-223	ENST00000565684	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.61	■■■□□ 2.97
KIFC3-223	ENST00000565684	ANKRD30B	Q9BXX2	1392 aa		33.59	■■■□□ 2.97
KIFC3-223	ENST00000565684	MST1R	Q04912	1400 aa		33.58	■■■□□ 2.97
KIFC3-223	ENST00000565684	ROBO2	Q9HCK4	1378 aa		33.58	■■■□□ 2.97
KIFC3-223	ENST00000565684	ASXL1	Q8IXJ9	1541 aa		33.58	■■■□□ 2.97
KIFC3-223	ENST00000565684	PIK3C2G	O75747	1445 aa		33.55	■■■□□ 2.96
KIFC3-223	ENST00000565684	NHSL1	Q5SYE7	1610 aa		33.53	■■■□□ 2.96
KIFC3-223	ENST00000565684	KNDC1	Q76NI1	1749 aa		33.52	■■■□□ 2.96
KIFC3-223	ENST00000565684	BRINP3	Q76B58	766 aa		33.51	■■■□□ 2.95
KIFC3-223	ENST00000565684	NRXN1	Q9ULB1	1477 aa		33.5	■■■□□ 2.95
KIFC3-223	ENST00000565684	MYOM2	P54296	1465 aa		33.49	■■■□□ 2.95
KIFC3-223	ENST00000565684	HRC	P23327	699 aa		33.48	■■■□□ 2.95
KIFC3-223	ENST00000565684	SHPRH	Q149N8	1683 aa		33.48	■■■□□ 2.95
KIFC3-223	ENST00000565684	PHF23	Q9BUL5	403 aa	Predicted RBP	33.47	■■■□□ 2.95
KIFC3-223	ENST00000565684	SOCS7	O14512	581 aa		33.46	■■■□□ 2.95
KIFC3-223	ENST00000565684	LAMC1	P11047	1609 aa		33.46	■■■□□ 2.95
KIFC3-223	ENST00000565684	JCAD	Q9P266	1359 aa		33.46	■■■□□ 2.95
KIFC3-223	ENST00000565684	TECPR2	O15040	1411 aa		33.45	■■■□□ 2.95
KIFC3-223	ENST00000565684	RGS17	Q9UGC6	210 aa	Predicted RBP	33.41	■■■□□ 2.94
KIFC3-223	ENST00000565684	LRPPRC	P42704	1394 aa	Known RBP	33.41	■■■□□ 2.94
KIFC3-223	ENST00000565684	C1orf167	Q5SNV9	1468 aa		33.41	■■■□□ 2.94
KIFC3-223	ENST00000565684	CDC42BPG	Q6DT37	1551 aa		33.41	■■■□□ 2.94
KIFC3-223	ENST00000565684	TMEM132E	Q6IEE7	984 aa		33.37	■■■□□ 2.93
KIFC3-223	ENST00000565684	LRP6	O75581	1613 aa		33.36	■■■□□ 2.93
KIFC3-223	ENST00000565684	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.36	■■■□□ 2.93
KIFC3-223	ENST00000565684	ABCC11	Q96J66	1382 aa		33.35	■■■□□ 2.93
KIFC3-223	ENST00000565684	STK26	Q9P289	416 aa		33.34	■■■□□ 2.93
KIFC3-223	ENST00000565684	C14orf93	Q9H972	538 aa	Known RBP	33.33	■■■□□ 2.93
KIFC3-223	ENST00000565684	PLEKHH1	Q9ULM0	1364 aa		33.31	■■■□□ 2.92
KIFC3-223	ENST00000565684	DDX17	Q92841	729 aa	Known RBP	33.3	■■■□□ 2.92

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms