RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 RBM33Q96EV2 1170 aaKnown RBP17.96■□□□□ 0.47
NSMCE1-209ENST00000565384 BCANQ96GW7 911 aa17.95■□□□□ 0.46
NSMCE1-209ENST00000565384 ROBO1Q9Y6N7 1651 aa17.95■□□□□ 0.46
NSMCE1-209ENST00000565384 ZFYVE9O95405 1425 aa17.95■□□□□ 0.46
NSMCE1-209ENST00000565384 GCC2Q8IWJ2 1684 aa17.94■□□□□ 0.46
NSMCE1-209ENST00000565384 UNC13BO14795 1591 aa17.94■□□□□ 0.46
NSMCE1-209ENST00000565384 PLEKHG1Q9ULL1 1385 aa17.93■□□□□ 0.46
NSMCE1-209ENST00000565384 RIMS2Q9UQ26 1411 aa17.93■□□□□ 0.46
NSMCE1-209ENST00000565384 RGS17Q9UGC6 210 aaPredicted RBP17.93■□□□□ 0.46
NSMCE1-209ENST00000565384 MYO5BQ9ULV0 1848 aa17.93■□□□□ 0.46
NSMCE1-209ENST00000565384 TMEM131LA2VDJ0 1609 aa17.92■□□□□ 0.46
NSMCE1-209ENST00000565384 MSH6P52701 1360 aa17.91■□□□□ 0.46
NSMCE1-209ENST00000565384 PPP1R15AO75807 674 aaPredicted RBP17.91■□□□□ 0.46
NSMCE1-209ENST00000565384 HDGFP51858 240 aaKnown RBP17.89■□□□□ 0.45
NSMCE1-209ENST00000565384 CHD2O14647 1828 aaKnown RBP17.88■□□□□ 0.45
NSMCE1-209ENST00000565384 E9PCH4 1651 aa17.88■□□□□ 0.45
NSMCE1-209ENST00000565384 ROCK1Q13464 1354 aa17.88■□□□□ 0.45
NSMCE1-209ENST00000565384 CHGAP10645 457 aaKnown RBP17.87■□□□□ 0.45
NSMCE1-209ENST00000565384 IQGAP3Q86VI3 1631 aa17.86■□□□□ 0.45
NSMCE1-209ENST00000565384 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.85■□□□□ 0.45
NSMCE1-209ENST00000565384 TBX22Q9Y458 520 aa17.85■□□□□ 0.45
NSMCE1-209ENST00000565384 PHLPP1O60346 1717 aa17.84■□□□□ 0.45
NSMCE1-209ENST00000565384 ADAMTS13Q76LX8 1427 aa17.84■□□□□ 0.45
NSMCE1-209ENST00000565384 SLAIN2Q9P270 581 aa17.84■□□□□ 0.45
NSMCE1-209ENST00000565384 DIP2AQ14689 1571 aa17.83■□□□□ 0.45
NSMCE1-209ENST00000565384 NUTM2DQ5VT03 806 aaPredicted RBP17.83■□□□□ 0.44
NSMCE1-209ENST00000565384 NCOA3Q9Y6Q9 1424 aa17.82■□□□□ 0.44
NSMCE1-209ENST00000565384 POTEAQ6S8J7 498 aa17.82■□□□□ 0.44
NSMCE1-209ENST00000565384 NUP155O75694 1391 aa17.8■□□□□ 0.44
NSMCE1-209ENST00000565384 JCADQ9P266 1359 aa17.8■□□□□ 0.44
NSMCE1-209ENST00000565384 PIK3R4Q99570 1358 aa17.79■□□□□ 0.44
NSMCE1-209ENST00000565384 C14orf37Q86TY3 774 aa17.79■□□□□ 0.44
NSMCE1-209ENST00000565384 COL16A1Q07092 1604 aaPredicted RBP17.79■□□□□ 0.44
NSMCE1-209ENST00000565384 ITGAEP38570 1179 aa17.78■□□□□ 0.44
NSMCE1-209ENST00000565384 TRPM2O94759 1503 aa17.77■□□□□ 0.44
NSMCE1-209ENST00000565384 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.76■□□□□ 0.43
NSMCE1-209ENST00000565384 CADPS2Q86UW7 1296 aa17.75■□□□□ 0.43
NSMCE1-209ENST00000565384 C19orf44Q9H6X5 657 aa17.75■□□□□ 0.43
NSMCE1-209ENST00000565384 PTPRUQ92729 1446 aa17.74■□□□□ 0.43
NSMCE1-209ENST00000565384 AHDC1Q5TGY3 1603 aaPredicted RBP17.74■□□□□ 0.43
NSMCE1-209ENST00000565384 ATF3P18847 181 aa17.74■□□□□ 0.43
NSMCE1-209ENST00000565384 AMOTL2Q9Y2J4 779 aa17.73■□□□□ 0.43
NSMCE1-209ENST00000565384 LRP6O75581 1613 aa17.72■□□□□ 0.43
NSMCE1-209ENST00000565384 NRXN3Q9Y4C0 1643 aa17.72■□□□□ 0.43
NSMCE1-209ENST00000565384 SPHKAPQ2M3C7 1700 aa17.72■□□□□ 0.43
NSMCE1-209ENST00000565384 SPATA31A6Q5VVP1 1343 aa17.72■□□□□ 0.43
NSMCE1-209ENST00000565384 SETBP1Q9Y6X0 1596 aa17.71■□□□□ 0.43
NSMCE1-209ENST00000565384 XRN1Q8IZH2 1706 aaKnown RBP17.7■□□□□ 0.42
NSMCE1-209ENST00000565384 PPARGC1BQ86YN6 1023 aaKnown RBP17.7■□□□□ 0.42
NSMCE1-209ENST00000565384 SETD1AO15047 1707 aaKnown RBP17.69■□□□□ 0.42
NSMCE1-209ENST00000565384 SHPRHQ149N8 1683 aa17.69■□□□□ 0.42
NSMCE1-209ENST00000565384 DCCP43146 1447 aa17.69■□□□□ 0.42
NSMCE1-209ENST00000565384 ZNF326Q5BKZ1 582 aaKnown RBP17.68■□□□□ 0.42
NSMCE1-209ENST00000565384 MEX3CQ5U5Q3 659 aaKnown RBP17.67■□□□□ 0.42
NSMCE1-209ENST00000565384 BRINP3Q76B58 766 aa17.67■□□□□ 0.42
NSMCE1-209ENST00000565384 METP08581 1390 aa17.66■□□□□ 0.42
NSMCE1-209ENST00000565384 CLTCL1P53675 1640 aa17.65■□□□□ 0.42
NSMCE1-209ENST00000565384 ASXL1Q8IXJ9 1541 aa17.65■□□□□ 0.42
NSMCE1-209ENST00000565384 MST1RQ04912 1400 aa17.64■□□□□ 0.42
NSMCE1-209ENST00000565384 NEXMIFQ5QGS0 1516 aa17.64■□□□□ 0.41
NSMCE1-209ENST00000565384 ZNF772Q68DY9 489 aaPredicted RBP17.63■□□□□ 0.41
NSMCE1-209ENST00000565384 RRBP1Q9P2E9 1410 aaKnown RBP17.62■□□□□ 0.41
NSMCE1-209ENST00000565384 NHSL1Q5SYE7 1610 aa17.61■□□□□ 0.41
NSMCE1-209ENST00000565384 SETD5Q9C0A6 1442 aa17.61■□□□□ 0.41
NSMCE1-209ENST00000565384 ADGRL3Q9HAR2 1447 aa17.61■□□□□ 0.41
NSMCE1-209ENST00000565384 NAIPQ13075 1403 aa17.6■□□□□ 0.41
NSMCE1-209ENST00000565384 NUTM2BA6NNL0 878 aaPredicted RBP17.59■□□□□ 0.41
NSMCE1-209ENST00000565384 NUTM2EB1AL46 878 aaPredicted RBP17.59■□□□□ 0.41
NSMCE1-209ENST00000565384 NUTM2AQ8IVF1 878 aaPredicted RBP17.59■□□□□ 0.41
NSMCE1-209ENST00000565384 KIF1BO60333 1816 aa17.58■□□□□ 0.41
NSMCE1-209ENST00000565384 NALCNQ8IZF0 1738 aa17.58■□□□□ 0.41
NSMCE1-209ENST00000565384 TRIM52Q96A61 297 aa17.58■□□□□ 0.4
NSMCE1-209ENST00000565384 LRRC59Q96AG4 307 aaKnown RBP17.55■□□□□ 0.4
NSMCE1-209ENST00000565384 PTCH1Q13635 1447 aa17.55■□□□□ 0.4
NSMCE1-209ENST00000565384 RXRBP28702 533 aa17.54■□□□□ 0.4
NSMCE1-209ENST00000565384 DDX17Q92841 729 aaKnown RBP17.54■□□□□ 0.4
NSMCE1-209ENST00000565384 AFF2P51816 1311 aa17.53■□□□□ 0.4
NSMCE1-209ENST00000565384 PNPLA6Q8IY17 1366 aa17.53■□□□□ 0.4
NSMCE1-209ENST00000565384 C1orf167Q5SNV9 1468 aa17.52■□□□□ 0.4
NSMCE1-209ENST00000565384 CDK12Q9NYV4 1490 aaPredicted RBP17.52■□□□□ 0.4
NSMCE1-209ENST00000565384 VGFO15240 615 aaPredicted RBP17.52■□□□□ 0.4
NSMCE1-209ENST00000565384 UPF1Q92900 1129 aaKnown RBP eCLIP17.52■□□□□ 0.4
NSMCE1-209ENST00000565384 HFM1A2PYH4 1435 aa17.52■□□□□ 0.4
NSMCE1-209ENST00000565384 ROBO2Q9HCK4 1378 aa17.51■□□□□ 0.39
NSMCE1-209ENST00000565384 PRAG1Q86YV5 1406 aa17.5■□□□□ 0.39
NSMCE1-209ENST00000565384 C8orf37Q96NL8 207 aa17.5■□□□□ 0.39
NSMCE1-209ENST00000565384 LAMC1P11047 1609 aa17.49■□□□□ 0.39
NSMCE1-209ENST00000565384 RPGRIP1LQ68CZ1 1315 aa17.48■□□□□ 0.39
NSMCE1-209ENST00000565384 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
NSMCE1-209ENST00000565384 PPLO60437 1756 aa17.48■□□□□ 0.39
NSMCE1-209ENST00000565384 RGS12O14924 1447 aa17.46■□□□□ 0.39
NSMCE1-209ENST00000565384 ORAI2Q96SN7 254 aa17.45■□□□□ 0.38
NSMCE1-209ENST00000565384 SOS2Q07890 1332 aaPredicted RBP17.45■□□□□ 0.38
NSMCE1-209ENST00000565384 QTRT2Q9H974 415 aaKnown RBP17.44■□□□□ 0.38
NSMCE1-209ENST00000565384 ADAMTS2O95450 1211 aa17.43■□□□□ 0.38
NSMCE1-209ENST00000565384 RBM6P78332 1123 aaKnown RBP17.43■□□□□ 0.38
NSMCE1-209ENST00000565384 CDC42BPGQ6DT37 1551 aa17.41■□□□□ 0.38
NSMCE1-209ENST00000565384 FOXD1Q16676 465 aa17.41■□□□□ 0.38
NSMCE1-209ENST00000565384 NGLY1Q96IV0 654 aa17.41■□□□□ 0.38
NSMCE1-209ENST00000565384 COL22A1Q8NFW1 1626 aaPredicted RBP17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms