RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 SMARCE1Q969G3 411 aa6.16□□□□□ -1.42
SMG1-211ENST00000565324 PDCL2Q8N4E4 241 aa6.15□□□□□ -1.42
SMG1-211ENST00000565324 MCTP1Q6DN14 999 aa6.15□□□□□ -1.42
SMG1-211ENST00000565324 CCDC73Q6ZRK6 1079 aa6.15□□□□□ -1.42
SMG1-211ENST00000565324 WRNQ14191 1432 aaPredicted RBP eCLIP6.15□□□□□ -1.42
SMG1-211ENST00000565324 PODXL2Q9NZ53 605 aa6.15□□□□□ -1.42
SMG1-211ENST00000565324 HSP90AB2PQ58FF8 381 aa6.15□□□□□ -1.42
SMG1-211ENST00000565324 PDCP20941 246 aa6.15□□□□□ -1.42
SMG1-211ENST00000565324 NOL8Q76FK4 1167 aaKnown RBP6.15□□□□□ -1.42
SMG1-211ENST00000565324 G3V3G9 751 aa6.15□□□□□ -1.43
SMG1-211ENST00000565324 DCAF8Q5TAQ9 597 aa6.15□□□□□ -1.43
SMG1-211ENST00000565324 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.15□□□□□ -1.433e-6■■■■■ 57.5
SMG1-211ENST00000565324 SAFBQ15424 915 aaKnown RBP eCLIP6.15□□□□□ -1.43
SMG1-211ENST00000565324 HSP90AB3PQ58FF7 597 aa6.15□□□□□ -1.43
SMG1-211ENST00000565324 BRMS1Q9HCU9 246 aa6.15□□□□□ -1.43
SMG1-211ENST00000565324 ZBED9Q6R2W3 1325 aa6.14□□□□□ -1.43
SMG1-211ENST00000565324 CT47B1P0C2W7 299 aaPredicted RBP6.14□□□□□ -1.43
SMG1-211ENST00000565324 NAP1L1P55209 391 aaKnown RBP6.14□□□□□ -1.43
SMG1-211ENST00000565324 KRI1Q8N9T8 703 aaKnown RBP6.14□□□□□ -1.43
SMG1-211ENST00000565324 MYO15BQ96JP2 1530 aa6.14□□□□□ -1.43
SMG1-211ENST00000565324 DDX11Q96FC9 970 aa6.14□□□□□ -1.43
SMG1-211ENST00000565324 TOMM22Q9NS69 142 aa6.14□□□□□ -1.43
SMG1-211ENST00000565324 CPLX1O14810 134 aa6.14□□□□□ -1.43
SMG1-211ENST00000565324 FMN1Q68DA7 1419 aa6.14□□□□□ -1.43
SMG1-211ENST00000565324 SENP3-EIF4A1A0A087X0R7 540 aa6.14□□□□□ -1.43
SMG1-211ENST00000565324 FILIP1LQ4L180 1135 aa6.14□□□□□ -1.43
SMG1-211ENST00000565324 E9PSI1 815 aa6.14□□□□□ -1.43
SMG1-211ENST00000565324 MBD3O95983 291 aa6.14□□□□□ -1.43
SMG1-211ENST00000565324 EPS15P42566 896 aa6.14□□□□□ -1.43
SMG1-211ENST00000565324 FOXD4L1Q9NU39 408 aa6.14□□□□□ -1.43
SMG1-211ENST00000565324 UACAQ9BZF9 1416 aa6.14□□□□□ -1.43
SMG1-211ENST00000565324 FAM107BQ9H098 131 aa6.14□□□□□ -1.43
SMG1-211ENST00000565324 DDX19BQ9UMR2 479 aa6.14□□□□□ -1.43
SMG1-211ENST00000565324 TRDNQ13061 729 aa6.13□□□□□ -1.43
SMG1-211ENST00000565324 KAT6BQ8WYB5 2073 aa6.13□□□□□ -1.43
SMG1-211ENST00000565324 HSPA5P11021 654 aaKnown RBP6.13□□□□□ -1.43
SMG1-211ENST00000565324 OFD1O75665 1012 aa6.13□□□□□ -1.43
SMG1-211ENST00000565324 XBP1P17861 261 aa6.13□□□□□ -1.43
SMG1-211ENST00000565324 PSMA5P28066 241 aa6.13□□□□□ -1.43
SMG1-211ENST00000565324 KCNH8Q96L42 1107 aa6.13□□□□□ -1.43
SMG1-211ENST00000565324 NOL10Q9BSC4 688 aaKnown RBP6.13□□□□□ -1.43
SMG1-211ENST00000565324 FOXD4L5Q5VV16 416 aaPredicted RBP6.13□□□□□ -1.43
SMG1-211ENST00000565324 FOXD4L4Q8WXT5 416 aaPredicted RBP6.13□□□□□ -1.43
SMG1-211ENST00000565324 SMC3Q9UQE7 1217 aa6.13□□□□□ -1.43
SMG1-211ENST00000565324 MYBBP1AQ9BQG0 1328 aaKnown RBP6.13□□□□□ -1.43
SMG1-211ENST00000565324 PLCD4Q9BRC7 762 aa6.13□□□□□ -1.43
SMG1-211ENST00000565324 ERICH2A1L162 156 aa6.12□□□□□ -1.43
SMG1-211ENST00000565324 CCDC43Q96MW1 224 aaKnown RBP6.12□□□□□ -1.43
SMG1-211ENST00000565324 KINO60870 393 aaKnown RBP6.12□□□□□ -1.43
SMG1-211ENST00000565324 SEPT7Q16181 437 aaKnown RBP6.12□□□□□ -1.43
SMG1-211ENST00000565324 ANKRD45Q5TZF3 282 aa6.12□□□□□ -1.43
SMG1-211ENST00000565324 VPS8Q8N3P4 1428 aa6.12□□□□□ -1.43
SMG1-211ENST00000565324 MCM2P49736 904 aa6.12□□□□□ -1.43
SMG1-211ENST00000565324 INTS3Q68E01 1043 aaKnown RBP6.12□□□□□ -1.43
SMG1-211ENST00000565324 SLC4A10Q6U841 1118 aa6.12□□□□□ -1.43
SMG1-211ENST00000565324 FRAT2O75474 233 aaPredicted RBP6.12□□□□□ -1.43
SMG1-211ENST00000565324 RILPL2Q969X0 211 aa6.12□□□□□ -1.43
SMG1-211ENST00000565324 BAZ1BQ9UIG0 1483 aaKnown RBP6.12□□□□□ -1.43
SMG1-211ENST00000565324 SIN3AQ96ST3 1273 aa6.12□□□□□ -1.43
SMG1-211ENST00000565324 R3HCC1Q9Y3T6 440 aaKnown RBP6.12□□□□□ -1.43
SMG1-211ENST00000565324 TRIM5Q9C035 493 aa6.11□□□□□ -1.43
SMG1-211ENST00000565324 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.11□□□□□ -1.43
SMG1-211ENST00000565324 NINLQ9Y2I6 1382 aa6.11□□□□□ -1.43
SMG1-211ENST00000565324 RRP1P56182 461 aaKnown RBP6.11□□□□□ -1.43
SMG1-211ENST00000565324 SLC26A8Q96RN1 970 aa6.11□□□□□ -1.43
SMG1-211ENST00000565324 ZNHIT6Q9NWK9 470 aaKnown RBP6.11□□□□□ -1.43
SMG1-211ENST00000565324 ERC2O15083 957 aa6.11□□□□□ -1.43
SMG1-211ENST00000565324 PDIA4P13667 645 aaKnown RBP6.11□□□□□ -1.43
SMG1-211ENST00000565324 HSP90AB4PQ58FF6 505 aa6.11□□□□□ -1.43
SMG1-211ENST00000565324 GIMAP7Q8NHV1 300 aa6.11□□□□□ -1.43
SMG1-211ENST00000565324 ANKRD30AQ9BXX3 1397 aa6.11□□□□□ -1.43
SMG1-211ENST00000565324 FEZ1Q99689 392 aa6.1□□□□□ -1.43
SMG1-211ENST00000565324 TRIM34Q9BYJ4 488 aa6.1□□□□□ -1.43
SMG1-211ENST00000565324 KIF2AO00139 706 aaPredicted RBP6.1□□□□□ -1.43
SMG1-211ENST00000565324 JMYQ8N9B5 988 aa6.1□□□□□ -1.43
SMG1-211ENST00000565324 SYCP1Q15431 976 aa6.1□□□□□ -1.43
SMG1-211ENST00000565324 ENOX2Q16206 610 aaKnown RBP6.1□□□□□ -1.43
SMG1-211ENST00000565324 ZKSCAN2Q63HK3 967 aa6.1□□□□□ -1.43
SMG1-211ENST00000565324 CTDP1Q9Y5B0 961 aaPredicted RBP6.1□□□□□ -1.43
SMG1-211ENST00000565324 MCM3P25205 808 aa6.1□□□□□ -1.43
SMG1-211ENST00000565324 CCDC18Q5T9S5 1454 aa6.1□□□□□ -1.43
SMG1-211ENST00000565324 PDILTQ8N807 584 aa6.1□□□□□ -1.43
SMG1-211ENST00000565324 SDF4Q9BRK5 362 aa6.1□□□□□ -1.43
SMG1-211ENST00000565324 GBP3Q9H0R5 595 aa6.1□□□□□ -1.43
SMG1-211ENST00000565324 TSPY26PQ9H489 355 aa6.1□□□□□ -1.43
SMG1-211ENST00000565324 SPATA24Q86W54 205 aa6.1□□□□□ -1.43
SMG1-211ENST00000565324 MAGEC2Q9UBF1 373 aaPredicted RBP6.1□□□□□ -1.43
SMG1-211ENST00000565324 CNKSR2Q8WXI2 1034 aa6.1□□□□□ -1.43
SMG1-211ENST00000565324 MAP9Q49MG5 647 aa6.09□□□□□ -1.43
SMG1-211ENST00000565324 VPS37CA5D8V6 355 aaPredicted RBP6.09□□□□□ -1.43
SMG1-211ENST00000565324 ANO2Q9NQ90 1003 aa6.09□□□□□ -1.43
SMG1-211ENST00000565324 CALCOCO1Q9P1Z2 691 aa6.09□□□□□ -1.43
SMG1-211ENST00000565324 ZFYVE27Q5T4F4 411 aa6.09□□□□□ -1.43
SMG1-211ENST00000565324 NACADO15069 1562 aa6.09□□□□□ -1.43
SMG1-211ENST00000565324 TXLNAP40222 546 aa6.09□□□□□ -1.43
SMG1-211ENST00000565324 EIF4G1Q04637 1599 aaKnown RBP6.09□□□□□ -1.43
SMG1-211ENST00000565324 GBP2P32456 591 aaPredicted RBP6.09□□□□□ -1.43
SMG1-211ENST00000565324 SENP3Q9H4L4 574 aaPredicted RBP6.09□□□□□ -1.43
SMG1-211ENST00000565324 CLUAP1Q96AJ1 413 aa6.09□□□□□ -1.43
SMG1-211ENST00000565324 LRRCC1Q9C099 1032 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms