RNA–Protein interactions for RNA: ENST00000564067.5

TRAF7-202, Transcript of TNF receptor associated factor 7, humanhuman

TSL 3

Gene TRAF7, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7-202ENST00000564067 ABCC5O15440 1437 aa27.92■■■□□ 2.06
TRAF7-202ENST00000564067 KANK4Q5T7N3 995 aaPredicted RBP27.92■■■□□ 2.06
TRAF7-202ENST00000564067 ADGRB3O60242 1522 aa27.92■■■□□ 2.06
TRAF7-202ENST00000564067 NOS1P29475 1434 aa27.92■■■□□ 2.06
TRAF7-202ENST00000564067 NCOA3Q9Y6Q9 1424 aa27.92■■■□□ 2.06
TRAF7-202ENST00000564067 COL16A1Q07092 1604 aaPredicted RBP27.88■■■□□ 2.05
TRAF7-202ENST00000564067 CROCC2H7BZ55 1655 aa27.87■■■□□ 2.05
TRAF7-202ENST00000564067 PLEKHG1Q9ULL1 1385 aa27.87■■■□□ 2.05
TRAF7-202ENST00000564067 ANKRD30AQ9BXX3 1397 aa27.86■■■□□ 2.05
TRAF7-202ENST00000564067 PPP1R15AO75807 674 aaPredicted RBP27.85■■■□□ 2.05
TRAF7-202ENST00000564067 CADPS2Q86UW7 1296 aa27.85■■■□□ 2.05
TRAF7-202ENST00000564067 TRIM52Q96A61 297 aa27.85■■■□□ 2.05
TRAF7-202ENST00000564067 DAPK1P53355 1430 aa27.84■■■□□ 2.05
TRAF7-202ENST00000564067 RXRBP28702 533 aa27.84■■■□□ 2.05
TRAF7-202ENST00000564067 C14orf37Q86TY3 774 aa27.84■■■□□ 2.05
TRAF7-202ENST00000564067 LRP6O75581 1613 aa27.83■■■□□ 2.05
TRAF7-202ENST00000564067 TBX22Q9Y458 520 aa27.83■■■□□ 2.05
TRAF7-202ENST00000564067 CHD2O14647 1828 aaKnown RBP27.83■■■□□ 2.05
TRAF7-202ENST00000564067 C19orf44Q9H6X5 657 aa27.81■■■□□ 2.04
TRAF7-202ENST00000564067 ATF3P18847 181 aa27.8■■■□□ 2.04
TRAF7-202ENST00000564067 ZFYVE9O95405 1425 aa27.8■■■□□ 2.04
TRAF7-202ENST00000564067 RPRD2Q5VT52 1461 aaKnown RBP27.8■■■□□ 2.04
TRAF7-202ENST00000564067 PTPN23Q9H3S7 1636 aa27.79■■■□□ 2.04
TRAF7-202ENST00000564067 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.78■■■□□ 2.04
TRAF7-202ENST00000564067 AHDC1Q5TGY3 1603 aaPredicted RBP27.78■■■□□ 2.04
TRAF7-202ENST00000564067 CDK12Q9NYV4 1490 aaPredicted RBP27.77■■■□□ 2.04
TRAF7-202ENST00000564067 RIMS2Q9UQ26 1411 aa27.77■■■□□ 2.04
TRAF7-202ENST00000564067 SHPRHQ149N8 1683 aa27.76■■■□□ 2.03
TRAF7-202ENST00000564067 CHIC2Q9UKJ5 165 aa27.75■■■□□ 2.03
TRAF7-202ENST00000564067 PIK3R4Q99570 1358 aa27.73■■■□□ 2.03
TRAF7-202ENST00000564067 APLP2Q06481 763 aa27.7■■■□□ 2.02
TRAF7-202ENST00000564067 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.68■■■□□ 2.02
TRAF7-202ENST00000564067 DIP2AQ14689 1571 aa27.68■■■□□ 2.02
TRAF7-202ENST00000564067 NUTM2BA6NNL0 878 aaPredicted RBP27.67■■■□□ 2.02
TRAF7-202ENST00000564067 NUTM2EB1AL46 878 aaPredicted RBP27.67■■■□□ 2.02
TRAF7-202ENST00000564067 BRINP3Q76B58 766 aa27.67■■■□□ 2.02
TRAF7-202ENST00000564067 NUTM2AQ8IVF1 878 aaPredicted RBP27.67■■■□□ 2.02
TRAF7-202ENST00000564067 TMEM131LA2VDJ0 1609 aa27.66■■■□□ 2.02
TRAF7-202ENST00000564067 ADAMTS13Q76LX8 1427 aa27.65■■■□□ 2.02
TRAF7-202ENST00000564067 AFF2P51816 1311 aa27.65■■■□□ 2.02
TRAF7-202ENST00000564067 GCC2Q8IWJ2 1684 aa27.64■■■□□ 2.02
TRAF7-202ENST00000564067 ADGRL2O95490 1459 aa27.64■■■□□ 2.01
TRAF7-202ENST00000564067 MYO5BQ9ULV0 1848 aa27.63■■■□□ 2.01
TRAF7-202ENST00000564067 CHGAP10645 457 aaKnown RBP27.63■■■□□ 2.01
TRAF7-202ENST00000564067 DCCP43146 1447 aa27.63■■■□□ 2.01
TRAF7-202ENST00000564067 SETD5Q9C0A6 1442 aa27.61■■■□□ 2.01
TRAF7-202ENST00000564067 ANKRD50Q9ULJ7 1429 aa27.61■■■□□ 2.01
TRAF7-202ENST00000564067 RBM6P78332 1123 aaKnown RBP27.6■■■□□ 2.01
TRAF7-202ENST00000564067 LRRC59Q96AG4 307 aaKnown RBP27.6■■■□□ 2.01
TRAF7-202ENST00000564067 AMOTL2Q9Y2J4 779 aa27.6■■■□□ 2.01
TRAF7-202ENST00000564067 TRPM2O94759 1503 aa27.58■■■□□ 2.01
TRAF7-202ENST00000564067 SRCAPQ6ZRS2 3230 aa27.57■■■□□ 2
TRAF7-202ENST00000564067 FOXD1Q16676 465 aa27.56■■■□□ 2
TRAF7-202ENST00000564067 QTRT2Q9H974 415 aaKnown RBP27.56■■■□□ 2
TRAF7-202ENST00000564067 NUTM2DQ5VT03 806 aaPredicted RBP27.55■■■□□ 2
TRAF7-202ENST00000564067 ASXL1Q8IXJ9 1541 aa27.55■■■□□ 2
TRAF7-202ENST00000564067 RGS12O14924 1447 aa27.53■■■□□ 2
TRAF7-202ENST00000564067 C8orf37Q96NL8 207 aa27.53■■■□□ 2
TRAF7-202ENST00000564067 LOC105371045A0A1W2PR82 267 aa27.52■■■□□ 2
TRAF7-202ENST00000564067 NGLY1Q96IV0 654 aa27.52■■■□□ 2
TRAF7-202ENST00000564067 PTPRUQ92729 1446 aa27.5■■□□□ 1.99
TRAF7-202ENST00000564067 MST1RQ04912 1400 aa27.49■■□□□ 1.99
TRAF7-202ENST00000564067 NHSL1Q5SYE7 1610 aa27.47■■□□□ 1.99
TRAF7-202ENST00000564067 ATAD2Q6PL18 1390 aa27.46■■□□□ 1.99
TRAF7-202ENST00000564067 FAM50AQ14320 339 aaKnown RBP27.45■■□□□ 1.98
TRAF7-202ENST00000564067 PNPLA6Q8IY17 1366 aa27.45■■□□□ 1.98
TRAF7-202ENST00000564067 UNC13BO14795 1591 aa27.43■■□□□ 1.98
TRAF7-202ENST00000564067 ZRANB1Q9UGI0 708 aa27.41■■□□□ 1.98
TRAF7-202ENST00000564067 E9PCH4 1651 aa27.4■■□□□ 1.98
TRAF7-202ENST00000564067 XRN1Q8IZH2 1706 aaKnown RBP27.4■■□□□ 1.98
TRAF7-202ENST00000564067 ADGRL3Q9HAR2 1447 aa27.38■■□□□ 1.97
TRAF7-202ENST00000564067 ADAMTS2O95450 1211 aa27.37■■□□□ 1.97
TRAF7-202ENST00000564067 TRPC5Q9UL62 973 aaPredicted RBP27.37■■□□□ 1.97
TRAF7-202ENST00000564067 SETBP1Q9Y6X0 1596 aa27.37■■□□□ 1.97
TRAF7-202ENST00000564067 DDX17Q92841 729 aaKnown RBP27.35■■□□□ 1.97
TRAF7-202ENST00000564067 USP21Q9UK80 565 aa27.35■■□□□ 1.97
TRAF7-202ENST00000564067 IQGAP3Q86VI3 1631 aa27.34■■□□□ 1.97
TRAF7-202ENST00000564067 CCDC125Q86Z20 511 aa27.33■■□□□ 1.97
TRAF7-202ENST00000564067 NRXN3Q9Y4C0 1643 aa27.32■■□□□ 1.96
TRAF7-202ENST00000564067 METP08581 1390 aa27.32■■□□□ 1.96
TRAF7-202ENST00000564067 NUP155O75694 1391 aa27.31■■□□□ 1.96
TRAF7-202ENST00000564067 ZNF326Q5BKZ1 582 aaKnown RBP27.3■■□□□ 1.96
TRAF7-202ENST00000564067 FNBP4Q8N3X1 1017 aaPredicted RBP27.3■■□□□ 1.96
TRAF7-202ENST00000564067 PTCH1Q13635 1447 aa27.3■■□□□ 1.96
TRAF7-202ENST00000564067 ROCK1Q13464 1354 aa27.29■■□□□ 1.96
TRAF7-202ENST00000564067 C1orf167Q5SNV9 1468 aa27.28■■□□□ 1.96
TRAF7-202ENST00000564067 SOS2Q07890 1332 aaPredicted RBP27.28■■□□□ 1.96
TRAF7-202ENST00000564067 LAMC1P11047 1609 aa27.25■■□□□ 1.95
TRAF7-202ENST00000564067 ATRNO75882 1429 aa27.24■■□□□ 1.95
TRAF7-202ENST00000564067 NALCNQ8IZF0 1738 aa27.22■■□□□ 1.95
TRAF7-202ENST00000564067 EP400Q96L91 3159 aa27.2■■□□□ 1.94
TRAF7-202ENST00000564067 ORAI2Q96SN7 254 aa27.19■■□□□ 1.94
TRAF7-202ENST00000564067 SPHKAPQ2M3C7 1700 aa27.15■■□□□ 1.94
TRAF7-202ENST00000564067 COL22A1Q8NFW1 1626 aaPredicted RBP27.13■■□□□ 1.93
TRAF7-202ENST00000564067 NPHP3Q7Z494 1330 aa27.13■■□□□ 1.93
TRAF7-202ENST00000564067 GJD4Q96KN9 370 aaPredicted RBP27.12■■□□□ 1.93
TRAF7-202ENST00000564067 NEXMIFQ5QGS0 1516 aa27.11■■□□□ 1.93
TRAF7-202ENST00000564067 MYOM2P54296 1465 aa27.11■■□□□ 1.93
TRAF7-202ENST00000564067 VGFO15240 615 aaPredicted RBP27.1■■□□□ 1.93
TRAF7-202ENST00000564067 BCL9LQ86UU0 1499 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms