RNA–Protein interactions for RNA: ENST00000563837.1

AC009041.2-208, humanhuman

TSL 2

Gene AC009041.2, Length 705 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-208ENST00000563837 NUTM2DQ5VT03 806 aaPredicted RBP28.81■■■□□ 2.2
AC009041.2-208ENST00000563837 TMEM131LA2VDJ0 1609 aa28.8■■■□□ 2.2
AC009041.2-208ENST00000563837 MYO5BQ9ULV0 1848 aa28.8■■■□□ 2.2
AC009041.2-208ENST00000563837 ZFYVE9O95405 1425 aa28.78■■■□□ 2.2
AC009041.2-208ENST00000563837 DISP3Q9P2K9 1392 aa28.78■■■□□ 2.2
AC009041.2-208ENST00000563837 HSPA1LP34931 641 aa28.76■■■□□ 2.19
AC009041.2-208ENST00000563837 ALKQ9UM73 1620 aa28.75■■■□□ 2.19
AC009041.2-208ENST00000563837 HDGFP51858 240 aaKnown RBP28.74■■■□□ 2.19
AC009041.2-208ENST00000563837 TRIM52Q96A61 297 aa28.74■■■□□ 2.19
AC009041.2-208ENST00000563837 RBM33Q96EV2 1170 aaKnown RBP28.74■■■□□ 2.19
AC009041.2-208ENST00000563837 KCNA6P17658 529 aa28.73■■■□□ 2.19
AC009041.2-208ENST00000563837 PLEKHG1Q9ULL1 1385 aa28.73■■■□□ 2.19
AC009041.2-208ENST00000563837 HFM1A2PYH4 1435 aa28.7■■■□□ 2.19
AC009041.2-208ENST00000563837 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.7■■■□□ 2.18
AC009041.2-208ENST00000563837 PROSER2Q86WR7 435 aaPredicted RBP28.69■■■□□ 2.18
AC009041.2-208ENST00000563837 TMEM94Q12767 1356 aa28.69■■■□□ 2.18
AC009041.2-208ENST00000563837 SPHKAPQ2M3C7 1700 aa28.66■■■□□ 2.18
AC009041.2-208ENST00000563837 ZNF326Q5BKZ1 582 aaKnown RBP28.65■■■□□ 2.18
AC009041.2-208ENST00000563837 XIRP1Q702N8 1843 aaKnown RBP28.64■■■□□ 2.18
AC009041.2-208ENST00000563837 NWD1Q149M9 1564 aa28.6■■■□□ 2.17
AC009041.2-208ENST00000563837 SLC4A1APQ9BWU0 796 aaKnown RBP28.6■■■□□ 2.17
AC009041.2-208ENST00000563837 TBX22Q9Y458 520 aa28.6■■■□□ 2.17
AC009041.2-208ENST00000563837 ADAMTS13Q76LX8 1427 aa28.59■■■□□ 2.17
AC009041.2-208ENST00000563837 NKTRP30414 1462 aaKnown RBP28.59■■■□□ 2.17
AC009041.2-208ENST00000563837 CLTCL1P53675 1640 aa28.58■■■□□ 2.17
AC009041.2-208ENST00000563837 ILDR2Q71H61 639 aa28.57■■■□□ 2.16
AC009041.2-208ENST00000563837 TRPM2O94759 1503 aa28.57■■■□□ 2.16
AC009041.2-208ENST00000563837 FOXD1Q16676 465 aa28.53■■■□□ 2.16
AC009041.2-208ENST00000563837 CHD2O14647 1828 aaKnown RBP28.52■■■□□ 2.16
AC009041.2-208ENST00000563837 MSH6P52701 1360 aa28.5■■■□□ 2.15
AC009041.2-208ENST00000563837 DIP2AQ14689 1571 aa28.5■■■□□ 2.15
AC009041.2-208ENST00000563837 C14orf37Q86TY3 774 aa28.49■■■□□ 2.15
AC009041.2-208ENST00000563837 AMOTL2Q9Y2J4 779 aa28.47■■■□□ 2.15
AC009041.2-208ENST00000563837 PTPRUQ92729 1446 aa28.46■■■□□ 2.15
AC009041.2-208ENST00000563837 NEXMIFQ5QGS0 1516 aa28.45■■■□□ 2.15
AC009041.2-208ENST00000563837 PIK3R4Q99570 1358 aa28.45■■■□□ 2.14
AC009041.2-208ENST00000563837 MED1Q15648 1581 aaPredicted RBP28.45■■■□□ 2.14
AC009041.2-208ENST00000563837 NRXN3Q9Y4C0 1643 aa28.44■■■□□ 2.14
AC009041.2-208ENST00000563837 FAM135BQ49AJ0 1406 aa28.43■■■□□ 2.14
AC009041.2-208ENST00000563837 KIF1BO60333 1816 aa28.43■■■□□ 2.14
AC009041.2-208ENST00000563837 SETBP1Q9Y6X0 1596 aa28.42■■■□□ 2.14
AC009041.2-208ENST00000563837 MPHOSPH9Q99550 1183 aa28.41■■■□□ 2.14
AC009041.2-208ENST00000563837 SLAIN2Q9P270 581 aa28.41■■■□□ 2.14
AC009041.2-208ENST00000563837 METP08581 1390 aa28.4■■■□□ 2.14
AC009041.2-208ENST00000563837 ROBO1Q9Y6N7 1651 aa28.39■■■□□ 2.14
AC009041.2-208ENST00000563837 SETD5Q9C0A6 1442 aa28.35■■■□□ 2.13
AC009041.2-208ENST00000563837 NCOA3Q9Y6Q9 1424 aa28.35■■■□□ 2.13
AC009041.2-208ENST00000563837 VGFO15240 615 aaPredicted RBP28.34■■■□□ 2.13
AC009041.2-208ENST00000563837 PHF23Q9BUL5 403 aaPredicted RBP28.34■■■□□ 2.13
AC009041.2-208ENST00000563837 C19orf44Q9H6X5 657 aa28.34■■■□□ 2.13
AC009041.2-208ENST00000563837 ATF3P18847 181 aa28.33■■■□□ 2.13
AC009041.2-208ENST00000563837 CCDC144AA2RUR9 1427 aa28.33■■■□□ 2.13
AC009041.2-208ENST00000563837 RGL3Q3MIN7 710 aa28.31■■■□□ 2.12
AC009041.2-208ENST00000563837 XRN1Q8IZH2 1706 aaKnown RBP28.31■■■□□ 2.12
AC009041.2-208ENST00000563837 RPGRIP1LQ68CZ1 1315 aa28.3■■■□□ 2.12
AC009041.2-208ENST00000563837 CADPS2Q86UW7 1296 aa28.3■■■□□ 2.12
AC009041.2-208ENST00000563837 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.29■■■□□ 2.12
AC009041.2-208ENST00000563837 RAB3GAP2Q9H2M9 1393 aa28.27■■■□□ 2.12
AC009041.2-208ENST00000563837 SOCS7O14512 581 aa28.25■■■□□ 2.11
AC009041.2-208ENST00000563837 PPLO60437 1756 aa28.23■■■□□ 2.11
AC009041.2-208ENST00000563837 ADGRF5Q8IZF2 1346 aa28.22■■■□□ 2.11
AC009041.2-208ENST00000563837 PHLPP1O60346 1717 aa28.22■■■□□ 2.11
AC009041.2-208ENST00000563837 SPATA31E1Q6ZUB1 1445 aa28.2■■■□□ 2.11
AC009041.2-208ENST00000563837 SETD1AO15047 1707 aaKnown RBP28.18■■■□□ 2.1
AC009041.2-208ENST00000563837 ACIN1Q9UKV3 1341 aaKnown RBP28.18■■■□□ 2.1
AC009041.2-208ENST00000563837 ROBO2Q9HCK4 1378 aa28.17■■■□□ 2.1
AC009041.2-208ENST00000563837 BRINP3Q76B58 766 aa28.17■■■□□ 2.1
AC009041.2-208ENST00000563837 DCCP43146 1447 aa28.17■■■□□ 2.1
AC009041.2-208ENST00000563837 ADGRL3Q9HAR2 1447 aa28.16■■■□□ 2.1
AC009041.2-208ENST00000563837 MST1RQ04912 1400 aa28.14■■■□□ 2.1
AC009041.2-208ENST00000563837 JCADQ9P266 1359 aa28.13■■■□□ 2.09
AC009041.2-208ENST00000563837 COL16A1Q07092 1604 aaPredicted RBP28.13■■■□□ 2.09
AC009041.2-208ENST00000563837 ANKRD30BQ9BXX2 1392 aa28.12■■■□□ 2.09
AC009041.2-208ENST00000563837 NALCNQ8IZF0 1738 aa28.12■■■□□ 2.09
AC009041.2-208ENST00000563837 PTCH1Q13635 1447 aa28.12■■■□□ 2.09
AC009041.2-208ENST00000563837 STK26Q9P289 416 aa28.11■■■□□ 2.09
AC009041.2-208ENST00000563837 RGS17Q9UGC6 210 aaPredicted RBP28.11■■■□□ 2.09
AC009041.2-208ENST00000563837 ASXL1Q8IXJ9 1541 aa28.08■■■□□ 2.09
AC009041.2-208ENST00000563837 AHDC1Q5TGY3 1603 aaPredicted RBP28.08■■■□□ 2.09
AC009041.2-208ENST00000563837 TMEM132EQ6IEE7 984 aa28.08■■■□□ 2.09
AC009041.2-208ENST00000563837 IFT172Q9UG01 1749 aa28.08■■■□□ 2.09
AC009041.2-208ENST00000563837 DDX17Q92841 729 aaKnown RBP28.07■■■□□ 2.08
AC009041.2-208ENST00000563837 PIK3C2GO75747 1445 aa28.04■■■□□ 2.08
AC009041.2-208ENST00000563837 PRAG1Q86YV5 1406 aa28.02■■■□□ 2.08
AC009041.2-208ENST00000563837 WAPLQ7Z5K2 1190 aa28.02■■■□□ 2.08
AC009041.2-208ENST00000563837 C1orf167Q5SNV9 1468 aa28.02■■■□□ 2.08
AC009041.2-208ENST00000563837 LRPPRCP42704 1394 aaKnown RBP27.99■■■□□ 2.07
AC009041.2-208ENST00000563837 MEX3CQ5U5Q3 659 aaKnown RBP27.99■■■□□ 2.07
AC009041.2-208ENST00000563837 ORAI2Q96SN7 254 aa27.99■■■□□ 2.07
AC009041.2-208ENST00000563837 NUTM2BA6NNL0 878 aaPredicted RBP27.98■■■□□ 2.07
AC009041.2-208ENST00000563837 NUTM2EB1AL46 878 aaPredicted RBP27.98■■■□□ 2.07
AC009041.2-208ENST00000563837 CFAP70Q5T0N1 1121 aa27.98■■■□□ 2.07
AC009041.2-208ENST00000563837 POTEAQ6S8J7 498 aa27.98■■■□□ 2.07
AC009041.2-208ENST00000563837 NUTM2AQ8IVF1 878 aaPredicted RBP27.98■■■□□ 2.07
AC009041.2-208ENST00000563837 LRP6O75581 1613 aa27.98■■■□□ 2.07
AC009041.2-208ENST00000563837 SPATA31A6Q5VVP1 1343 aa27.97■■■□□ 2.07
AC009041.2-208ENST00000563837 PLEKHH1Q9ULM0 1364 aa27.96■■■□□ 2.07
AC009041.2-208ENST00000563837 HRCP23327 699 aa27.95■■■□□ 2.06
AC009041.2-208ENST00000563837 C14orf93Q9H972 538 aaKnown RBP27.95■■■□□ 2.06
AC009041.2-208ENST00000563837 NHSL1Q5SYE7 1610 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms