RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 RNF166Q96A37 237 aaPredicted RBP6.75□□□□□ -1.33
CHD9-207ENST00000562806 PRR14Q9BWN1 585 aa6.75□□□□□ -1.33
CHD9-207ENST00000562806 TRIM66O15016 1216 aa6.74□□□□□ -1.33
CHD9-207ENST00000562806 GPCPD1Q9NPB8 672 aa6.74□□□□□ -1.33
CHD9-207ENST00000562806 TSR3Q9UJK0 312 aaKnown RBP6.74□□□□□ -1.33
CHD9-207ENST00000562806 FAM161AQ3B820 660 aa6.73□□□□□ -1.33
CHD9-207ENST00000562806 SWT1Q5T5J6 900 aaKnown RBP6.73□□□□□ -1.33
CHD9-207ENST00000562806 THSD4Q6ZMP0 1018 aa6.73□□□□□ -1.33
CHD9-207ENST00000562806 SAMD7Q7Z3H4 446 aa6.73□□□□□ -1.33
CHD9-207ENST00000562806 KCTD12Q96CX2 325 aaKnown RBP6.73□□□□□ -1.33
CHD9-207ENST00000562806 HCSTQ9UBK5 93 aa6.73□□□□□ -1.33
CHD9-207ENST00000562806 C3orf80F5H4A9 247 aa6.72□□□□□ -1.33
CHD9-207ENST00000562806 PPP4CP60510 307 aa6.72□□□□□ -1.33
CHD9-207ENST00000562806 MMRN1Q13201 1228 aa6.72□□□□□ -1.33
CHD9-207ENST00000562806 PDE4DQ08499 809 aa6.71□□□□□ -1.34
CHD9-207ENST00000562806 TTLL12Q14166 644 aaPredicted RBP6.71□□□□□ -1.34
CHD9-207ENST00000562806 MDM2Q00987 491 aaPredicted RBP6.7□□□□□ -1.34
CHD9-207ENST00000562806 KMT5BQ4FZB7 885 aa6.7□□□□□ -1.34
CHD9-207ENST00000562806 RNF40O75150 1001 aa6.69□□□□□ -1.34
CHD9-207ENST00000562806 PHOX2BQ99453 314 aa6.69□□□□□ -1.34
CHD9-207ENST00000562806 TMUB1Q9BVT8 246 aa6.69□□□□□ -1.34
CHD9-207ENST00000562806 HPS5Q9UPZ3 1129 aa6.69□□□□□ -1.34
CHD9-207ENST00000562806 BCAMP50895 628 aa6.68□□□□□ -1.34
CHD9-207ENST00000562806 DIXDC1Q155Q3 683 aa6.68□□□□□ -1.34
CHD9-207ENST00000562806 DDX11L8A8MPP1 907 aa6.67□□□□□ -1.34
CHD9-207ENST00000562806 GRIPAP1Q4V328 841 aa6.67□□□□□ -1.34
CHD9-207ENST00000562806 RDH13Q8NBN7 331 aa6.67□□□□□ -1.34
CHD9-207ENST00000562806 FAM217BQ9NTX9 383 aaPredicted RBP6.67□□□□□ -1.34
CHD9-207ENST00000562806 SSTR3P32745 418 aaPredicted RBP6.66□□□□□ -1.34
CHD9-207ENST00000562806 PTPN5P54829 565 aa6.66□□□□□ -1.34
CHD9-207ENST00000562806 GIGYF2Q6Y7W6 1299 aaKnown RBP6.66□□□□□ -1.34
CHD9-207ENST00000562806 PARP9Q8IXQ6 854 aa6.66□□□□□ -1.34
CHD9-207ENST00000562806 CD46P15529 392 aa6.65□□□□□ -1.34
CHD9-207ENST00000562806 USP46P62068 366 aa6.65□□□□□ -1.34
CHD9-207ENST00000562806 ACTN4O43707 911 aaKnown RBP6.64□□□□□ -1.35
CHD9-207ENST00000562806 PRKCSHP14314 528 aaPredicted RBP6.64□□□□□ -1.35
CHD9-207ENST00000562806 GCGRP47871 477 aa6.64□□□□□ -1.35
CHD9-207ENST00000562806 DDRGK1Q96HY6 314 aa6.64□□□□□ -1.35
CHD9-207ENST00000562806 WBP1LQ9NX94 342 aa6.64□□□□□ -1.35
CHD9-207ENST00000562806 CFHP08603 1231 aa6.63□□□□□ -1.35
CHD9-207ENST00000562806 SLC10A3P09131 477 aa6.63□□□□□ -1.35
CHD9-207ENST00000562806 NLRP7Q8WX94 980 aa6.63□□□□□ -1.35
CHD9-207ENST00000562806 NEUROD2Q15784 382 aa6.62□□□□□ -1.35
CHD9-207ENST00000562806 NUTM1Q86Y26 1132 aa6.62□□□□□ -1.35
CHD9-207ENST00000562806 RSPH6AQ9H0K4 717 aa6.62□□□□□ -1.35
CHD9-207ENST00000562806 KDM4CQ9H3R0 1056 aa6.62□□□□□ -1.35
CHD9-207ENST00000562806 KDM4AO75164 1064 aa6.61□□□□□ -1.35
CHD9-207ENST00000562806 ATP6V1AP38606 617 aa6.61□□□□□ -1.35
CHD9-207ENST00000562806 GJA5P36382 358 aa6.6□□□□□ -1.35
CHD9-207ENST00000562806 BEGAINQ9BUH8 593 aa6.6□□□□□ -1.35
CHD9-207ENST00000562806 REPIN1Q9BWE0 567 aaKnown RBP6.6□□□□□ -1.35
CHD9-207ENST00000562806 PLSCR2Q9NRY7 297 aa6.6□□□□□ -1.35
CHD9-207ENST00000562806 PCDHB3Q9Y5E6 796 aa6.6□□□□□ -1.35
CHD9-207ENST00000562806 NR1I2O75469 434 aa6.59□□□□□ -1.35
CHD9-207ENST00000562806 APLP1P51693 650 aa6.59□□□□□ -1.35
CHD9-207ENST00000562806 MS4A1P11836 297 aa6.58□□□□□ -1.36
CHD9-207ENST00000562806 BRPF1P55201 1214 aaPredicted RBP6.58□□□□□ -1.36
CHD9-207ENST00000562806 IL21Q9HBE4 155 aa6.58□□□□□ -1.36
CHD9-207ENST00000562806 ITGBL1O95965 494 aaPredicted RBP6.57□□□□□ -1.36
CHD9-207ENST00000562806 Q3C1V9 767 aa6.57□□□□□ -1.36
CHD9-207ENST00000562806 SALL2Q9Y467 1007 aaPredicted RBP6.57□□□□□ -1.36
CHD9-207ENST00000562806 KCNC4Q03721 635 aa6.56□□□□□ -1.36
CHD9-207ENST00000562806 FUT2Q10981 343 aa6.56□□□□□ -1.36
CHD9-207ENST00000562806 IFFO2Q5TF58 517 aa6.56□□□□□ -1.36
CHD9-207ENST00000562806 SPIRE2Q8WWL2 714 aa6.56□□□□□ -1.36
CHD9-207ENST00000562806 GPBP1L1Q9HC44 474 aaPredicted RBP6.56□□□□□ -1.36
CHD9-207ENST00000562806 GOPCQ9HD26 462 aa6.56□□□□□ -1.36
CHD9-207ENST00000562806 MORN1Q5T089 497 aa6.55□□□□□ -1.36
CHD9-207ENST00000562806 TBC1D2Q9BYX2 928 aa6.55□□□□□ -1.36
CHD9-207ENST00000562806 HOXA2O43364 376 aa6.54□□□□□ -1.36
CHD9-207ENST00000562806 TUSC1Q2TAM9 212 aa6.54□□□□□ -1.36
CHD9-207ENST00000562806 TJAP1Q5JTD0 557 aa6.54□□□□□ -1.36
CHD9-207ENST00000562806 MTRQ99707 1265 aa6.54□□□□□ -1.36
CHD9-207ENST00000562806 SPDYE5A6NIY4 337 aa6.53□□□□□ -1.36
CHD9-207ENST00000562806 ZPR1O75312 459 aa6.53□□□□□ -1.36
CHD9-207ENST00000562806 FMNL1O95466 1100 aaPredicted RBP6.53□□□□□ -1.36
CHD9-207ENST00000562806 SH3D19Q5HYK7 790 aa6.53□□□□□ -1.36
CHD9-207ENST00000562806 SPTLC1O15269 473 aa6.52□□□□□ -1.37
CHD9-207ENST00000562806 FDX1P10109 184 aa6.52□□□□□ -1.37
CHD9-207ENST00000562806 GGCXP38435 758 aa6.52□□□□□ -1.37
CHD9-207ENST00000562806 SKIV2LQ15477 1246 aaKnown RBP6.52□□□□□ -1.37
CHD9-207ENST00000562806 BLOC1S3Q6QNY0 202 aa6.52□□□□□ -1.37
CHD9-207ENST00000562806 SCUBE3Q8IX30 993 aa6.52□□□□□ -1.37
CHD9-207ENST00000562806 FAM117AQ9C073 453 aa6.52□□□□□ -1.37
CHD9-207ENST00000562806 COPS2P61201 443 aa6.51□□□□□ -1.37
CHD9-207ENST00000562806 PRPF38BQ5VTL8 546 aaKnown RBP6.51□□□□□ -1.37
CHD9-207ENST00000562806 MYSM1Q5VVJ2 828 aa6.51□□□□□ -1.37
CHD9-207ENST00000562806 RIC3Q7Z5B4 369 aa6.51□□□□□ -1.37
CHD9-207ENST00000562806 PLA2G2EQ9NZK7 142 aa6.51□□□□□ -1.37
CHD9-207ENST00000562806 PUS10Q3MIT2 529 aaKnown RBP6.5□□□□□ -1.37
CHD9-207ENST00000562806 RSBN1LQ6PCB5 846 aaPredicted RBP6.5□□□□□ -1.37
CHD9-207ENST00000562806 IL27Q8NEV9 243 aa6.5□□□□□ -1.37
CHD9-207ENST00000562806 SLC27A5Q9Y2P5 690 aa6.5□□□□□ -1.37
CHD9-207ENST00000562806 MOXD2PA6NHM9 499 aa6.49□□□□□ -1.37
CHD9-207ENST00000562806 ADH1BP00325 375 aa6.49□□□□□ -1.37
CHD9-207ENST00000562806 CLK2P49760 499 aaKnown RBP6.49□□□□□ -1.37
CHD9-207ENST00000562806 PCMTD1Q96MG8 357 aaPredicted RBP6.49□□□□□ -1.37
CHD9-207ENST00000562806 SPSB2Q99619 263 aa6.49□□□□□ -1.37
CHD9-207ENST00000562806 PLEKHG3A1L390 1219 aa6.48□□□□□ -1.37
CHD9-207ENST00000562806 MTMR2Q13614 643 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms