RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 NKX2-3Q8TAU0 364 aa6.05□□□□□ -1.44
CHD9-204ENST00000561869 RBM46Q8TBY0 533 aaKnown RBP6.05□□□□□ -1.44
CHD9-204ENST00000561869 PXYLP1Q8TE99 480 aa6.05□□□□□ -1.44
CHD9-204ENST00000561869 IL21Q9HBE4 155 aa6.05□□□□□ -1.44
CHD9-204ENST00000561869 RCCD1A6NED2 376 aa6.04□□□□□ -1.44
CHD9-204ENST00000561869 OATP04181 439 aa6.04□□□□□ -1.44
CHD9-204ENST00000561869 METTL3Q86U44 580 aaKnown RBP6.04□□□□□ -1.44
CHD9-204ENST00000561869 DNAJB2P25686 324 aa6.03□□□□□ -1.44
CHD9-204ENST00000561869 PPP1R18Q6NYC8 613 aa6.03□□□□□ -1.44
CHD9-204ENST00000561869 Q6ZNB5 142 aa6.03□□□□□ -1.44
CHD9-204ENST00000561869 PHOX2BQ99453 314 aa6.03□□□□□ -1.44
CHD9-204ENST00000561869 PRKD2Q9BZL6 878 aa6.03□□□□□ -1.44
CHD9-204ENST00000561869 TMEM134Q9H6X4 195 aa6.03□□□□□ -1.44
CHD9-204ENST00000561869 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.02□□□□□ -1.45
CHD9-204ENST00000561869 IRF6O14896 467 aa6.01□□□□□ -1.45
CHD9-204ENST00000561869 COPS2P61201 443 aa6.01□□□□□ -1.45
CHD9-204ENST00000561869 MAP2K5Q13163 448 aa6.01□□□□□ -1.45
CHD9-204ENST00000561869 ZC3H15Q8WU90 426 aaKnown RBP6.01□□□□□ -1.45
CHD9-204ENST00000561869 ZMYND10O75800 440 aa6□□□□□ -1.45
CHD9-204ENST00000561869 HDGFP51858 240 aaKnown RBP6□□□□□ -1.45
CHD9-204ENST00000561869 EIF4ENIF1Q9NRA8 985 aaKnown RBP6□□□□□ -1.45
CHD9-204ENST00000561869 MINK1Q8N4C8 1332 aaPredicted RBP5.99□□□□□ -1.45
CHD9-204ENST00000561869 GFRA3O60609 400 aa5.99□□□□□ -1.45
CHD9-204ENST00000561869 BARGINQ6ZT62 677 aa5.99□□□□□ -1.45
CHD9-204ENST00000561869 SLF2Q8IX21 1173 aa5.99□□□□□ -1.45
CHD9-204ENST00000561869 NLRP7Q8WX94 980 aa5.99□□□□□ -1.45
CHD9-204ENST00000561869 SLC10A3P09131 477 aa5.98□□□□□ -1.45
CHD9-204ENST00000561869 ZPR1O75312 459 aa5.97□□□□□ -1.45
CHD9-204ENST00000561869 CCDC102AQ96A19 550 aa5.97□□□□□ -1.45
CHD9-204ENST00000561869 BCANQ96GW7 911 aa5.97□□□□□ -1.45
CHD9-204ENST00000561869 DAXXQ9UER7 740 aaPredicted RBP5.97□□□□□ -1.45
CHD9-204ENST00000561869 TLL1O43897 1013 aa5.96□□□□□ -1.46
CHD9-204ENST00000561869 LAPTM4AQ15012 233 aa5.96□□□□□ -1.46
CHD9-204ENST00000561869 BLOC1S3Q6QNY0 202 aa5.96□□□□□ -1.46
CHD9-204ENST00000561869 EMID1Q96A84 441 aaPredicted RBP5.96□□□□□ -1.46
CHD9-204ENST00000561869 V9GY48 417 aaPredicted RBP5.96□□□□□ -1.46
CHD9-204ENST00000561869 NRG2O14511 850 aaPredicted RBP5.95□□□□□ -1.46
CHD9-204ENST00000561869 PCDHB3Q9Y5E6 796 aa5.95□□□□□ -1.46
CHD9-204ENST00000561869 TRAF7Q6Q0C0 670 aa5.94□□□□□ -1.46
CHD9-204ENST00000561869 NECTIN2Q92692 538 aa5.94□□□□□ -1.46
CHD9-204ENST00000561869 TMUB1Q9BVT8 246 aa5.94□□□□□ -1.46
CHD9-204ENST00000561869 RNF223E7ERA6 249 aa5.93□□□□□ -1.46
CHD9-204ENST00000561869 ACTN4O43707 911 aaKnown RBP5.92□□□□□ -1.46
CHD9-204ENST00000561869 CFHP08603 1231 aa5.92□□□□□ -1.46
CHD9-204ENST00000561869 SLC4A3P48751 1232 aa5.92□□□□□ -1.46
CHD9-204ENST00000561869 MDM2Q00987 491 aaPredicted RBP5.92□□□□□ -1.46
CHD9-204ENST00000561869 TRIM67Q6ZTA4 783 aa5.92□□□□□ -1.46
CHD9-204ENST00000561869 KRI1Q8N9T8 703 aaKnown RBP5.92□□□□□ -1.46
CHD9-204ENST00000561869 REPIN1Q9BWE0 567 aaKnown RBP5.92□□□□□ -1.46
CHD9-204ENST00000561869 DDX11L8A8MPP1 907 aa5.91□□□□□ -1.46
CHD9-204ENST00000561869 PRR14Q9BWN1 585 aa5.91□□□□□ -1.46
CHD9-204ENST00000561869 PDZRN3Q9UPQ7 1066 aa5.91□□□□□ -1.46
CHD9-204ENST00000561869 PPEF1O14829 653 aaPredicted RBP5.9□□□□□ -1.46
CHD9-204ENST00000561869 S1PR4O95977 384 aa5.9□□□□□ -1.46
CHD9-204ENST00000561869 CD46P15529 392 aa5.9□□□□□ -1.46
CHD9-204ENST00000561869 GGCXP38435 758 aa5.9□□□□□ -1.46
CHD9-204ENST00000561869 GCGRP47871 477 aa5.9□□□□□ -1.46
CHD9-204ENST00000561869 KMT5BQ4FZB7 885 aa5.9□□□□□ -1.46
CHD9-204ENST00000561869 TRIM66O15016 1216 aa5.89□□□□□ -1.47
CHD9-204ENST00000561869 AMHR2Q16671 573 aa5.89□□□□□ -1.47
CHD9-204ENST00000561869 RSPH4AQ5TD94 716 aa5.89□□□□□ -1.47
CHD9-204ENST00000561869 SULF1Q8IWU6 871 aa5.89□□□□□ -1.47
CHD9-204ENST00000561869 RDH13Q8NBN7 331 aa5.89□□□□□ -1.47
CHD9-204ENST00000561869 GPCPD1Q9NPB8 672 aa5.89□□□□□ -1.47
CHD9-204ENST00000561869 CLCN1P35523 988 aa5.88□□□□□ -1.47
CHD9-204ENST00000561869 SLC19A1P41440 591 aa5.88□□□□□ -1.47
CHD9-204ENST00000561869 LIAT1Q6ZQX7 453 aa5.88□□□□□ -1.47
CHD9-204ENST00000561869 SLC24A3Q9HC58 644 aa5.88□□□□□ -1.47
CHD9-204ENST00000561869 FAM217BQ9NTX9 383 aaPredicted RBP5.88□□□□□ -1.47
CHD9-204ENST00000561869 PLA2G2CQ5R387 149 aa5.87□□□□□ -1.47
CHD9-204ENST00000561869 SPRYD7Q5W111 196 aa5.87□□□□□ -1.47
CHD9-204ENST00000561869 AK7Q96M32 723 aa5.87□□□□□ -1.47
CHD9-204ENST00000561869 ADH1BP00325 375 aa5.86□□□□□ -1.47
CHD9-204ENST00000561869 FUT2Q10981 343 aa5.86□□□□□ -1.47
CHD9-204ENST00000561869 PUS10Q3MIT2 529 aaKnown RBP5.86□□□□□ -1.47
CHD9-204ENST00000561869 MORN1Q5T089 497 aa5.86□□□□□ -1.47
CHD9-204ENST00000561869 ANKLE1Q8NAG6 615 aa5.86□□□□□ -1.47
CHD9-204ENST00000561869 SSTR3P32745 418 aaPredicted RBP5.85□□□□□ -1.47
CHD9-204ENST00000561869 SCUBE3Q8IX30 993 aa5.85□□□□□ -1.47
CHD9-204ENST00000561869 NR1I2O75469 434 aa5.84□□□□□ -1.47
CHD9-204ENST00000561869 ATP6V1AP38606 617 aa5.84□□□□□ -1.47
CHD9-204ENST00000561869 PARP9Q8IXQ6 854 aa5.84□□□□□ -1.47
CHD9-204ENST00000561869 KDM4AO75164 1064 aa5.83□□□□□ -1.48
CHD9-204ENST00000561869 TTLL12Q14166 644 aaPredicted RBP5.83□□□□□ -1.48
CHD9-204ENST00000561869 GIGYF2Q6Y7W6 1299 aaKnown RBP5.83□□□□□ -1.48
CHD9-204ENST00000561869 ZNF598Q86UK7 904 aaKnown RBP5.83□□□□□ -1.48
CHD9-204ENST00000561869 THAP11Q96EK4 314 aa5.83□□□□□ -1.48
CHD9-204ENST00000561869 SLC27A5Q9Y2P5 690 aa5.83□□□□□ -1.48
CHD9-204ENST00000561869 TNFRSF10AO00220 468 aa5.82□□□□□ -1.48
CHD9-204ENST00000561869 GDF9O60383 454 aa5.82□□□□□ -1.48
CHD9-204ENST00000561869 MS4A1P11836 297 aa5.82□□□□□ -1.48
CHD9-204ENST00000561869 PRR20EP86478 221 aa5.82□□□□□ -1.48
CHD9-204ENST00000561869 PRR20CP86479 221 aa5.82□□□□□ -1.48
CHD9-204ENST00000561869 PRR20DP86480 221 aa5.82□□□□□ -1.48
CHD9-204ENST00000561869 PRR20BP86481 221 aa5.82□□□□□ -1.48
CHD9-204ENST00000561869 PRR20AP86496 221 aa5.82□□□□□ -1.48
CHD9-204ENST00000561869 MYT1Q01538 1121 aa5.82□□□□□ -1.48
CHD9-204ENST00000561869 PDE4DQ08499 809 aa5.82□□□□□ -1.48
CHD9-204ENST00000561869 ZNF697Q5TEC3 545 aa5.82□□□□□ -1.48
CHD9-204ENST00000561869 ZNF787Q6DD87 383 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms