RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 LRCH3Q96II8 777 aa7.04□□□□□ -1.28
CTDSPL2-211ENST00000561189 HCSTQ9UBK5 93 aa7.04□□□□□ -1.28
CTDSPL2-211ENST00000561189 SMAPO00193 183 aa7.03□□□□□ -1.28
CTDSPL2-211ENST00000561189 SLF2Q8IX21 1173 aa7.03□□□□□ -1.28
CTDSPL2-211ENST00000561189 CCDC102AQ96A19 550 aa7.03□□□□□ -1.28
CTDSPL2-211ENST00000561189 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.03□□□□□ -1.28
CTDSPL2-211ENST00000561189 HDGFP51858 240 aaKnown RBP7.02□□□□□ -1.29
CTDSPL2-211ENST00000561189 AMHR2Q16671 573 aa7.02□□□□□ -1.29
CTDSPL2-211ENST00000561189 KCTD12Q96CX2 325 aaKnown RBP7.02□□□□□ -1.29
CTDSPL2-211ENST00000561189 TSR3Q9UJK0 312 aaKnown RBP7.02□□□□□ -1.29
CTDSPL2-211ENST00000561189 SLC4A3P48751 1232 aa7.01□□□□□ -1.29
CTDSPL2-211ENST00000561189 SAMD7Q7Z3H4 446 aa7.01□□□□□ -1.29
CTDSPL2-211ENST00000561189 TMUB1Q9BVT8 246 aa7.01□□□□□ -1.29
CTDSPL2-211ENST00000561189 SWT1Q5T5J6 900 aaKnown RBP7□□□□□ -1.29
CTDSPL2-211ENST00000561189 PHOX2BQ99453 314 aa7□□□□□ -1.29
CTDSPL2-211ENST00000561189 FAM161AQ3B820 660 aa6.99□□□□□ -1.29
CTDSPL2-211ENST00000561189 TRIM66O15016 1216 aa6.98□□□□□ -1.29
CTDSPL2-211ENST00000561189 PDE4DQ08499 809 aa6.98□□□□□ -1.29
CTDSPL2-211ENST00000561189 PRR14Q9BWN1 585 aa6.98□□□□□ -1.29
CTDSPL2-211ENST00000561189 CLCN1P35523 988 aa6.97□□□□□ -1.29
CTDSPL2-211ENST00000561189 BCAMP50895 628 aa6.97□□□□□ -1.29
CTDSPL2-211ENST00000561189 TTLL12Q14166 644 aaPredicted RBP6.97□□□□□ -1.29
CTDSPL2-211ENST00000561189 IFFO2Q5TF58 517 aa6.97□□□□□ -1.29
CTDSPL2-211ENST00000561189 SULF1Q8IWU6 871 aa6.97□□□□□ -1.29
CTDSPL2-211ENST00000561189 C14orf37Q86TY3 774 aa6.96□□□□□ -1.3
CTDSPL2-211ENST00000561189 KDM4CQ9H3R0 1056 aa6.96□□□□□ -1.3
CTDSPL2-211ENST00000561189 GPCPD1Q9NPB8 672 aa6.96□□□□□ -1.3
CTDSPL2-211ENST00000561189 HPS5Q9UPZ3 1129 aa6.96□□□□□ -1.3
CTDSPL2-211ENST00000561189 PPP4CP60510 307 aa6.95□□□□□ -1.3
CTDSPL2-211ENST00000561189 RSPH4AQ5TD94 716 aa6.95□□□□□ -1.3
CTDSPL2-211ENST00000561189 WBP1LQ9NX94 342 aa6.95□□□□□ -1.3
CTDSPL2-211ENST00000561189 ITGBL1O95965 494 aaPredicted RBP6.94□□□□□ -1.3
CTDSPL2-211ENST00000561189 DDRGK1Q96HY6 314 aa6.94□□□□□ -1.3
CTDSPL2-211ENST00000561189 SLC10A3P09131 477 aa6.93□□□□□ -1.3
CTDSPL2-211ENST00000561189 IL27Q8NEV9 243 aa6.93□□□□□ -1.3
CTDSPL2-211ENST00000561189 GPBP1L1Q9HC44 474 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-211ENST00000561189 FAM217BQ9NTX9 383 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-211ENST00000561189 ACTN4O43707 911 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-211ENST00000561189 CD46P15529 392 aa6.92□□□□□ -1.3
CTDSPL2-211ENST00000561189 KMT5BQ4FZB7 885 aa6.91□□□□□ -1.3
CTDSPL2-211ENST00000561189 GCGRP47871 477 aa6.9□□□□□ -1.3
CTDSPL2-211ENST00000561189 APLP1P51693 650 aa6.9□□□□□ -1.3
CTDSPL2-211ENST00000561189 PTPN5P54829 565 aa6.9□□□□□ -1.3
CTDSPL2-211ENST00000561189 MDM2Q00987 491 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL2-211ENST00000561189 PARP9Q8IXQ6 854 aa6.9□□□□□ -1.3
CTDSPL2-211ENST00000561189 ATP1B4Q9UN42 357 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL2-211ENST00000561189 CFHP08603 1231 aa6.88□□□□□ -1.31
CTDSPL2-211ENST00000561189 USP46P62068 366 aa6.88□□□□□ -1.31
CTDSPL2-211ENST00000561189 REPIN1Q9BWE0 567 aaKnown RBP6.88□□□□□ -1.31
CTDSPL2-211ENST00000561189 TIMELESSQ9UNS1 1208 aa6.88□□□□□ -1.31
CTDSPL2-211ENST00000561189 DDX11L8A8MPP1 907 aa6.87□□□□□ -1.31
CTDSPL2-211ENST00000561189 TJAP1Q5JTD0 557 aa6.87□□□□□ -1.31
CTDSPL2-211ENST00000561189 GIGYF2Q6Y7W6 1299 aaKnown RBP6.87□□□□□ -1.31
CTDSPL2-211ENST00000561189 NLRP7Q8WX94 980 aa6.87□□□□□ -1.31
CTDSPL2-211ENST00000561189 RNF40O75150 1001 aa6.86□□□□□ -1.31
CTDSPL2-211ENST00000561189 IL21Q9HBE4 155 aa6.86□□□□□ -1.31
CTDSPL2-211ENST00000561189 SALL2Q9Y467 1007 aaPredicted RBP6.86□□□□□ -1.31
CTDSPL2-211ENST00000561189 SSTR3P32745 418 aaPredicted RBP6.85□□□□□ -1.31
CTDSPL2-211ENST00000561189 GJA5P36382 358 aa6.85□□□□□ -1.31
CTDSPL2-211ENST00000561189 DIXDC1Q155Q3 683 aa6.85□□□□□ -1.31
CTDSPL2-211ENST00000561189 ATP6V1AP38606 617 aa6.84□□□□□ -1.31
CTDSPL2-211ENST00000561189 GRIPAP1Q4V328 841 aa6.84□□□□□ -1.31
CTDSPL2-211ENST00000561189 RDH13Q8NBN7 331 aa6.84□□□□□ -1.31
CTDSPL2-211ENST00000561189 MTRQ99707 1265 aa6.84□□□□□ -1.31
CTDSPL2-211ENST00000561189 PCDHB3Q9Y5E6 796 aa6.84□□□□□ -1.31
CTDSPL2-211ENST00000561189 KDM4AO75164 1064 aa6.83□□□□□ -1.32
CTDSPL2-211ENST00000561189 KCNC4Q03721 635 aa6.83□□□□□ -1.32
CTDSPL2-211ENST00000561189 PCMTD1Q96MG8 357 aaPredicted RBP6.83□□□□□ -1.32
CTDSPL2-211ENST00000561189 FAM117AQ9C073 453 aa6.83□□□□□ -1.32
CTDSPL2-211ENST00000561189 RSPH6AQ9H0K4 717 aa6.83□□□□□ -1.32
CTDSPL2-211ENST00000561189 NR1I2O75469 434 aa6.82□□□□□ -1.32
CTDSPL2-211ENST00000561189 MS4A1P11836 297 aa6.82□□□□□ -1.32
CTDSPL2-211ENST00000561189 MORN1Q5T089 497 aa6.82□□□□□ -1.32
CTDSPL2-211ENST00000561189 PLA2G2EQ9NZK7 142 aa6.82□□□□□ -1.32
CTDSPL2-211ENST00000561189 FUT2Q10981 343 aa6.81□□□□□ -1.32
CTDSPL2-211ENST00000561189 TUSC1Q2TAM9 212 aa6.81□□□□□ -1.32
CTDSPL2-211ENST00000561189 HOXA2O43364 376 aa6.8□□□□□ -1.32
CTDSPL2-211ENST00000561189 ZPR1O75312 459 aa6.8□□□□□ -1.32
CTDSPL2-211ENST00000561189 RGS20O76081 388 aa6.8□□□□□ -1.32
CTDSPL2-211ENST00000561189 A0A0G2JS52 829 aa6.79□□□□□ -1.32
CTDSPL2-211ENST00000561189 BLOC1S3Q6QNY0 202 aa6.79□□□□□ -1.32
CTDSPL2-211ENST00000561189 THAP11Q96EK4 314 aa6.79□□□□□ -1.32
CTDSPL2-211ENST00000561189 BEGAINQ9BUH8 593 aa6.79□□□□□ -1.32
CTDSPL2-211ENST00000561189 GOPCQ9HD26 462 aa6.79□□□□□ -1.32
CTDSPL2-211ENST00000561189 Q3C1V9 767 aa6.78□□□□□ -1.32
CTDSPL2-211ENST00000561189 SCUBE3Q8IX30 993 aa6.78□□□□□ -1.32
CTDSPL2-211ENST00000561189 SPIRE2Q8WWL2 714 aa6.78□□□□□ -1.32
CTDSPL2-211ENST00000561189 NUTM1Q86Y26 1132 aa6.77□□□□□ -1.33
CTDSPL2-211ENST00000561189 SPTLC1O15269 473 aa6.76□□□□□ -1.33
CTDSPL2-211ENST00000561189 ADH1BP00325 375 aa6.76□□□□□ -1.33
CTDSPL2-211ENST00000561189 FLIIQ13045 1269 aa6.76□□□□□ -1.33
CTDSPL2-211ENST00000561189 MSS51Q4VC12 460 aa6.76□□□□□ -1.33
CTDSPL2-211ENST00000561189 BRICD5Q6PL45 260 aa6.76□□□□□ -1.33
CTDSPL2-211ENST00000561189 TBC1D2Q9BYX2 928 aa6.76□□□□□ -1.33
CTDSPL2-211ENST00000561189 SLC27A5Q9Y2P5 690 aa6.76□□□□□ -1.33
CTDSPL2-211ENST00000561189 COPS2P61201 443 aa6.75□□□□□ -1.33
CTDSPL2-211ENST00000561189 SH3D19Q5HYK7 790 aa6.75□□□□□ -1.33
CTDSPL2-211ENST00000561189 ZNF516Q92618 1163 aa6.75□□□□□ -1.33
CTDSPL2-211ENST00000561189 PLEKHG3A1L390 1219 aa6.74□□□□□ -1.33
CTDSPL2-211ENST00000561189 FMNL1O95466 1100 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms