RNA–Protein interactions for RNA: ENST00000560300.1

RORA-213, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-213ENST00000560300 KCNA6P17658 529 aa26.58■■□□□ 1.85
RORA-213ENST00000560300 SENP3Q9H4L4 574 aaPredicted RBP26.58■■□□□ 1.85
RORA-213ENST00000560300 NWD1Q149M9 1564 aa26.57■■□□□ 1.84
RORA-213ENST00000560300 TMEM94Q12767 1356 aa26.57■■□□□ 1.84
RORA-213ENST00000560300 PPARGC1BQ86YN6 1023 aaKnown RBP26.56■■□□□ 1.84
RORA-213ENST00000560300 RIMS2Q9UQ26 1411 aa26.54■■□□□ 1.84
RORA-213ENST00000560300 ITGAEP38570 1179 aa26.53■■□□□ 1.84
RORA-213ENST00000560300 NKTRP30414 1462 aaKnown RBP26.53■■□□□ 1.84
RORA-213ENST00000560300 PLEKHG1Q9ULL1 1385 aa26.52■■□□□ 1.84
RORA-213ENST00000560300 RBM33Q96EV2 1170 aaKnown RBP26.5■■□□□ 1.83
RORA-213ENST00000560300 BCANQ96GW7 911 aa26.5■■□□□ 1.83
RORA-213ENST00000560300 NUP155O75694 1391 aa26.49■■□□□ 1.83
RORA-213ENST00000560300 PROSER2Q86WR7 435 aaPredicted RBP26.49■■□□□ 1.83
RORA-213ENST00000560300 FAM135BQ49AJ0 1406 aa26.48■■□□□ 1.83
RORA-213ENST00000560300 CHD2O14647 1828 aaKnown RBP26.47■■□□□ 1.83
RORA-213ENST00000560300 PPP1R15AO75807 674 aaPredicted RBP26.47■■□□□ 1.83
RORA-213ENST00000560300 CHGAP10645 457 aaKnown RBP26.46■■□□□ 1.83
RORA-213ENST00000560300 HDGFP51858 240 aaKnown RBP26.44■■□□□ 1.82
RORA-213ENST00000560300 ROBO1Q9Y6N7 1651 aa26.43■■□□□ 1.82
RORA-213ENST00000560300 PHF23Q9BUL5 403 aaPredicted RBP26.42■■□□□ 1.82
RORA-213ENST00000560300 ADAMTS13Q76LX8 1427 aa26.41■■□□□ 1.82
RORA-213ENST00000560300 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.41■■□□□ 1.82
RORA-213ENST00000560300 NUTM2DQ5VT03 806 aaPredicted RBP26.4■■□□□ 1.82
RORA-213ENST00000560300 MSH6P52701 1360 aa26.39■■□□□ 1.82
RORA-213ENST00000560300 TBX22Q9Y458 520 aa26.39■■□□□ 1.82
RORA-213ENST00000560300 SPHKAPQ2M3C7 1700 aa26.39■■□□□ 1.81
RORA-213ENST00000560300 DIP2AQ14689 1571 aa26.38■■□□□ 1.81
RORA-213ENST00000560300 RRBP1Q9P2E9 1410 aaKnown RBP26.38■■□□□ 1.81
RORA-213ENST00000560300 PIK3R4Q99570 1358 aa26.32■■□□□ 1.8
RORA-213ENST00000560300 SLAIN2Q9P270 581 aa26.3■■□□□ 1.8
RORA-213ENST00000560300 NAIPQ13075 1403 aa26.3■■□□□ 1.8
RORA-213ENST00000560300 NCOA3Q9Y6Q9 1424 aa26.3■■□□□ 1.8
RORA-213ENST00000560300 TRPM2O94759 1503 aa26.29■■□□□ 1.8
RORA-213ENST00000560300 NRXN3Q9Y4C0 1643 aa26.28■■□□□ 1.8
RORA-213ENST00000560300 RGS17Q9UGC6 210 aaPredicted RBP26.27■■□□□ 1.8
RORA-213ENST00000560300 PTPRUQ92729 1446 aa26.27■■□□□ 1.8
RORA-213ENST00000560300 CLTCL1P53675 1640 aa26.27■■□□□ 1.8
RORA-213ENST00000560300 PHLPP1O60346 1717 aa26.27■■□□□ 1.8
RORA-213ENST00000560300 SETBP1Q9Y6X0 1596 aa26.26■■□□□ 1.79
RORA-213ENST00000560300 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.25■■□□□ 1.79
RORA-213ENST00000560300 C14orf37Q86TY3 774 aa26.23■■□□□ 1.79
RORA-213ENST00000560300 XRN1Q8IZH2 1706 aaKnown RBP26.22■■□□□ 1.79
RORA-213ENST00000560300 AMOTL2Q9Y2J4 779 aa26.22■■□□□ 1.79
RORA-213ENST00000560300 NEXMIFQ5QGS0 1516 aa26.2■■□□□ 1.79
RORA-213ENST00000560300 ZNF326Q5BKZ1 582 aaKnown RBP26.2■■□□□ 1.78
RORA-213ENST00000560300 COL16A1Q07092 1604 aaPredicted RBP26.2■■□□□ 1.78
RORA-213ENST00000560300 C19orf44Q9H6X5 657 aa26.19■■□□□ 1.78
RORA-213ENST00000560300 HFM1A2PYH4 1435 aa26.18■■□□□ 1.78
RORA-213ENST00000560300 KIF1BO60333 1816 aa26.17■■□□□ 1.78
RORA-213ENST00000560300 CADPS2Q86UW7 1296 aa26.17■■□□□ 1.78
RORA-213ENST00000560300 JCADQ9P266 1359 aa26.16■■□□□ 1.78
RORA-213ENST00000560300 ATF3P18847 181 aa26.15■■□□□ 1.78
RORA-213ENST00000560300 METP08581 1390 aa26.15■■□□□ 1.78
RORA-213ENST00000560300 AHDC1Q5TGY3 1603 aaPredicted RBP26.14■■□□□ 1.77
RORA-213ENST00000560300 DCCP43146 1447 aa26.12■■□□□ 1.77
RORA-213ENST00000560300 POTEAQ6S8J7 498 aa26.11■■□□□ 1.77
RORA-213ENST00000560300 TRIM52Q96A61 297 aa26.11■■□□□ 1.77
RORA-213ENST00000560300 SETD1AO15047 1707 aaKnown RBP26.06■■□□□ 1.76
RORA-213ENST00000560300 BRINP3Q76B58 766 aa26.06■■□□□ 1.76
RORA-213ENST00000560300 SLC4A1APQ9BWU0 796 aaKnown RBP26.05■■□□□ 1.76
RORA-213ENST00000560300 LRP6O75581 1613 aa26.05■■□□□ 1.76
RORA-213ENST00000560300 SHPRHQ149N8 1683 aa26.05■■□□□ 1.76
RORA-213ENST00000560300 NALCNQ8IZF0 1738 aa26.05■■□□□ 1.76
RORA-213ENST00000560300 MST1RQ04912 1400 aa26.05■■□□□ 1.76
RORA-213ENST00000560300 ASXL1Q8IXJ9 1541 aa26.04■■□□□ 1.76
RORA-213ENST00000560300 ADGRL3Q9HAR2 1447 aa26.03■■□□□ 1.76
RORA-213ENST00000560300 PPLO60437 1756 aa26.01■■□□□ 1.75
RORA-213ENST00000560300 SPATA31A6Q5VVP1 1343 aa26.01■■□□□ 1.75
RORA-213ENST00000560300 NHSL1Q5SYE7 1610 aa25.99■■□□□ 1.75
RORA-213ENST00000560300 VGFO15240 615 aaPredicted RBP25.99■■□□□ 1.75
RORA-213ENST00000560300 RPGRIP1LQ68CZ1 1315 aa25.97■■□□□ 1.75
RORA-213ENST00000560300 PTCH1Q13635 1447 aa25.97■■□□□ 1.75
RORA-213ENST00000560300 FOXD1Q16676 465 aa25.96■■□□□ 1.75
RORA-213ENST00000560300 ROBO2Q9HCK4 1378 aa25.95■■□□□ 1.74
RORA-213ENST00000560300 PRAG1Q86YV5 1406 aa25.94■■□□□ 1.74
RORA-213ENST00000560300 SETD5Q9C0A6 1442 aa25.94■■□□□ 1.74
RORA-213ENST00000560300 MEX3CQ5U5Q3 659 aaKnown RBP25.92■■□□□ 1.74
RORA-213ENST00000560300 DDX17Q92841 729 aaKnown RBP25.89■■□□□ 1.74
RORA-213ENST00000560300 C1orf167Q5SNV9 1468 aa25.89■■□□□ 1.73
RORA-213ENST00000560300 CCDC144AA2RUR9 1427 aa25.88■■□□□ 1.73
RORA-213ENST00000560300 MPHOSPH9Q99550 1183 aa25.87■■□□□ 1.73
RORA-213ENST00000560300 SPATA31E1Q6ZUB1 1445 aa25.87■■□□□ 1.73
RORA-213ENST00000560300 IFT172Q9UG01 1749 aa25.86■■□□□ 1.73
RORA-213ENST00000560300 NUTM2BA6NNL0 878 aaPredicted RBP25.86■■□□□ 1.73
RORA-213ENST00000560300 NUTM2EB1AL46 878 aaPredicted RBP25.86■■□□□ 1.73
RORA-213ENST00000560300 NUTM2AQ8IVF1 878 aaPredicted RBP25.86■■□□□ 1.73
RORA-213ENST00000560300 LAMC1P11047 1609 aa25.85■■□□□ 1.73
RORA-213ENST00000560300 ZNF772Q68DY9 489 aaPredicted RBP25.85■■□□□ 1.73
RORA-213ENST00000560300 LRRC59Q96AG4 307 aaKnown RBP25.84■■□□□ 1.73
RORA-213ENST00000560300 ADGRF5Q8IZF2 1346 aa25.84■■□□□ 1.73
RORA-213ENST00000560300 PNPLA6Q8IY17 1366 aa25.83■■□□□ 1.73
RORA-213ENST00000560300 RGL3Q3MIN7 710 aa25.81■■□□□ 1.72
RORA-213ENST00000560300 ORAI2Q96SN7 254 aa25.79■■□□□ 1.72
RORA-213ENST00000560300 ANKRD30BQ9BXX2 1392 aa25.79■■□□□ 1.72
RORA-213ENST00000560300 CDC42BPGQ6DT37 1551 aa25.78■■□□□ 1.72
RORA-213ENST00000560300 AFF2P51816 1311 aa25.77■■□□□ 1.72
RORA-213ENST00000560300 TECPR2O15040 1411 aa25.76■■□□□ 1.71
RORA-213ENST00000560300 PIK3C2GO75747 1445 aa25.75■■□□□ 1.71
RORA-213ENST00000560300 SOS2Q07890 1332 aaPredicted RBP25.75■■□□□ 1.71
RORA-213ENST00000560300 KNDC1Q76NI1 1749 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms