RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 PPARGC1BQ86YN6 1023 aaKnown RBP25.49■■□□□ 1.67
NEK9-211ENST00000557673 NKTRP30414 1462 aaKnown RBP25.47■■□□□ 1.67
NEK9-211ENST00000557673 RGS17Q9UGC6 210 aaPredicted RBP25.46■■□□□ 1.67
NEK9-211ENST00000557673 MSH6P52701 1360 aa25.45■■□□□ 1.67
NEK9-211ENST00000557673 PPP1R15AO75807 674 aaPredicted RBP25.45■■□□□ 1.66
NEK9-211ENST00000557673 RBM33Q96EV2 1170 aaKnown RBP25.43■■□□□ 1.66
NEK9-211ENST00000557673 PLEKHG1Q9ULL1 1385 aa25.42■■□□□ 1.66
NEK9-211ENST00000557673 NWD1Q149M9 1564 aa25.41■■□□□ 1.66
NEK9-211ENST00000557673 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.41■■□□□ 1.66
NEK9-211ENST00000557673 SLAIN2Q9P270 581 aa25.41■■□□□ 1.66
NEK9-211ENST00000557673 ROBO1Q9Y6N7 1651 aa25.39■■□□□ 1.66
NEK9-211ENST00000557673 ZFYVE9O95405 1425 aa25.39■■□□□ 1.66
NEK9-211ENST00000557673 RIMS2Q9UQ26 1411 aa25.38■■□□□ 1.65
NEK9-211ENST00000557673 TBX22Q9Y458 520 aa25.38■■□□□ 1.65
NEK9-211ENST00000557673 NCOA3Q9Y6Q9 1424 aa25.35■■□□□ 1.65
NEK9-211ENST00000557673 CHGAP10645 457 aaKnown RBP25.34■■□□□ 1.65
NEK9-211ENST00000557673 TMEM131LA2VDJ0 1609 aa25.32■■□□□ 1.64
NEK9-211ENST00000557673 C14orf37Q86TY3 774 aa25.31■■□□□ 1.64
NEK9-211ENST00000557673 GCC2Q8IWJ2 1684 aa25.31■■□□□ 1.64
NEK9-211ENST00000557673 ROCK1Q13464 1354 aa25.31■■□□□ 1.64
NEK9-211ENST00000557673 JCADQ9P266 1359 aa25.31■■□□□ 1.64
NEK9-211ENST00000557673 POTEAQ6S8J7 498 aa25.3■■□□□ 1.64
NEK9-211ENST00000557673 CHD2O14647 1828 aaKnown RBP25.3■■□□□ 1.64
NEK9-211ENST00000557673 ITGAEP38570 1179 aa25.29■■□□□ 1.64
NEK9-211ENST00000557673 UNC13BO14795 1591 aa25.29■■□□□ 1.64
NEK9-211ENST00000557673 RRBP1Q9P2E9 1410 aaKnown RBP25.29■■□□□ 1.64
NEK9-211ENST00000557673 PIK3R4Q99570 1358 aa25.28■■□□□ 1.64
NEK9-211ENST00000557673 CADPS2Q86UW7 1296 aa25.27■■□□□ 1.64
NEK9-211ENST00000557673 MYO5BQ9ULV0 1848 aa25.27■■□□□ 1.64
NEK9-211ENST00000557673 C19orf44Q9H6X5 657 aa25.26■■□□□ 1.63
NEK9-211ENST00000557673 PHLPP1O60346 1717 aa25.25■■□□□ 1.63
NEK9-211ENST00000557673 DIP2AQ14689 1571 aa25.24■■□□□ 1.63
NEK9-211ENST00000557673 ATF3P18847 181 aa25.24■■□□□ 1.63
NEK9-211ENST00000557673 NUP155O75694 1391 aa25.23■■□□□ 1.63
NEK9-211ENST00000557673 NUTM2DQ5VT03 806 aaPredicted RBP25.23■■□□□ 1.63
NEK9-211ENST00000557673 ADAMTS13Q76LX8 1427 aa25.22■■□□□ 1.63
NEK9-211ENST00000557673 E9PCH4 1651 aa25.21■■□□□ 1.63
NEK9-211ENST00000557673 IQGAP3Q86VI3 1631 aa25.2■■□□□ 1.62
NEK9-211ENST00000557673 SPATA31A6Q5VVP1 1343 aa25.2■■□□□ 1.62
NEK9-211ENST00000557673 AMOTL2Q9Y2J4 779 aa25.18■■□□□ 1.62
NEK9-211ENST00000557673 TRPM2O94759 1503 aa25.17■■□□□ 1.62
NEK9-211ENST00000557673 MEX3CQ5U5Q3 659 aaKnown RBP25.16■■□□□ 1.62
NEK9-211ENST00000557673 COL16A1Q07092 1604 aaPredicted RBP25.15■■□□□ 1.62
NEK9-211ENST00000557673 ZNF772Q68DY9 489 aaPredicted RBP25.13■■□□□ 1.61
NEK9-211ENST00000557673 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.12■■□□□ 1.61
NEK9-211ENST00000557673 AHDC1Q5TGY3 1603 aaPredicted RBP25.11■■□□□ 1.61
NEK9-211ENST00000557673 DCCP43146 1447 aa25.1■■□□□ 1.61
NEK9-211ENST00000557673 ZNF326Q5BKZ1 582 aaKnown RBP25.09■■□□□ 1.61
NEK9-211ENST00000557673 SETD1AO15047 1707 aaKnown RBP25.09■■□□□ 1.61
NEK9-211ENST00000557673 BRINP3Q76B58 766 aa25.08■■□□□ 1.61
NEK9-211ENST00000557673 PTPRUQ92729 1446 aa25.08■■□□□ 1.61
NEK9-211ENST00000557673 LRP6O75581 1613 aa25.04■■□□□ 1.6
NEK9-211ENST00000557673 SETBP1Q9Y6X0 1596 aa25.04■■□□□ 1.6
NEK9-211ENST00000557673 SHPRHQ149N8 1683 aa25.04■■□□□ 1.6
NEK9-211ENST00000557673 NAIPQ13075 1403 aa25.02■■□□□ 1.6
NEK9-211ENST00000557673 SPHKAPQ2M3C7 1700 aa25■■□□□ 1.59
NEK9-211ENST00000557673 NUTM2BA6NNL0 878 aaPredicted RBP24.99■■□□□ 1.59
NEK9-211ENST00000557673 NUTM2EB1AL46 878 aaPredicted RBP24.99■■□□□ 1.59
NEK9-211ENST00000557673 METP08581 1390 aa24.99■■□□□ 1.59
NEK9-211ENST00000557673 RXRBP28702 533 aa24.99■■□□□ 1.59
NEK9-211ENST00000557673 NUTM2AQ8IVF1 878 aaPredicted RBP24.99■■□□□ 1.59
NEK9-211ENST00000557673 LRRC59Q96AG4 307 aaKnown RBP24.99■■□□□ 1.59
NEK9-211ENST00000557673 XRN1Q8IZH2 1706 aaKnown RBP24.98■■□□□ 1.59
NEK9-211ENST00000557673 NRXN3Q9Y4C0 1643 aa24.98■■□□□ 1.59
NEK9-211ENST00000557673 ASXL1Q8IXJ9 1541 aa24.97■■□□□ 1.59
NEK9-211ENST00000557673 SETD5Q9C0A6 1442 aa24.97■■□□□ 1.59
NEK9-211ENST00000557673 TRIM52Q96A61 297 aa24.97■■□□□ 1.59
NEK9-211ENST00000557673 MST1RQ04912 1400 aa24.96■■□□□ 1.59
NEK9-211ENST00000557673 HFM1A2PYH4 1435 aa24.95■■□□□ 1.58
NEK9-211ENST00000557673 ADGRL3Q9HAR2 1447 aa24.94■■□□□ 1.58
NEK9-211ENST00000557673 VGFO15240 615 aaPredicted RBP24.92■■□□□ 1.58
NEK9-211ENST00000557673 UPF1Q92900 1129 aaKnown RBP eCLIP24.92■■□□□ 1.58
NEK9-211ENST00000557673 AFF2P51816 1311 aa24.9■■□□□ 1.58
NEK9-211ENST00000557673 NEXMIFQ5QGS0 1516 aa24.9■■□□□ 1.58
NEK9-211ENST00000557673 CDK12Q9NYV4 1490 aaPredicted RBP24.89■■□□□ 1.58
NEK9-211ENST00000557673 CLTCL1P53675 1640 aa24.88■■□□□ 1.57
NEK9-211ENST00000557673 NHSL1Q5SYE7 1610 aa24.88■■□□□ 1.57
NEK9-211ENST00000557673 RPGRIP1LQ68CZ1 1315 aa24.86■■□□□ 1.57
NEK9-211ENST00000557673 C8orf37Q96NL8 207 aa24.85■■□□□ 1.57
NEK9-211ENST00000557673 KIF1BO60333 1816 aa24.84■■□□□ 1.57
NEK9-211ENST00000557673 PNPLA6Q8IY17 1366 aa24.84■■□□□ 1.57
NEK9-211ENST00000557673 PTCH1Q13635 1447 aa24.84■■□□□ 1.57
NEK9-211ENST00000557673 DDX17Q92841 729 aaKnown RBP24.83■■□□□ 1.57
NEK9-211ENST00000557673 QTRT2Q9H974 415 aaKnown RBP24.83■■□□□ 1.57
NEK9-211ENST00000557673 C1orf167Q5SNV9 1468 aa24.83■■□□□ 1.56
NEK9-211ENST00000557673 RBM6P78332 1123 aaKnown RBP24.82■■□□□ 1.56
NEK9-211ENST00000557673 NALCNQ8IZF0 1738 aa24.8■■□□□ 1.56
NEK9-211ENST00000557673 NGLY1Q96IV0 654 aa24.79■■□□□ 1.56
NEK9-211ENST00000557673 SLC4A1APQ9BWU0 796 aaKnown RBP24.79■■□□□ 1.56
NEK9-211ENST00000557673 ROBO2Q9HCK4 1378 aa24.78■■□□□ 1.56
NEK9-211ENST00000557673 PRAG1Q86YV5 1406 aa24.77■■□□□ 1.56
NEK9-211ENST00000557673 ADAMTS2O95450 1211 aa24.76■■□□□ 1.55
NEK9-211ENST00000557673 SOS2Q07890 1332 aaPredicted RBP24.76■■□□□ 1.55
NEK9-211ENST00000557673 ORAI2Q96SN7 254 aa24.75■■□□□ 1.55
NEK9-211ENST00000557673 LAMC1P11047 1609 aa24.73■■□□□ 1.55
NEK9-211ENST00000557673 RGS12O14924 1447 aa24.7■■□□□ 1.55
NEK9-211ENST00000557673 USP21Q9UK80 565 aa24.7■■□□□ 1.54
NEK9-211ENST00000557673 TRPC5Q9UL62 973 aaPredicted RBP24.69■■□□□ 1.54
NEK9-211ENST00000557673 NPHP3Q7Z494 1330 aa24.68■■□□□ 1.54
NEK9-211ENST00000557673 ESCO1Q5FWF5 840 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms