RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 INSM1Q01101 510 aaPredicted RBP10.84□□□□□ -0.67
FOXN3-217ENST00000557572 ANKLE1Q8NAG6 615 aa10.84□□□□□ -0.67
FOXN3-217ENST00000557572 SLC4A3P48751 1232 aa10.81□□□□□ -0.68
FOXN3-217ENST00000557572 BLOC1S3Q6QNY0 202 aa10.81□□□□□ -0.68
FOXN3-217ENST00000557572 TLL1O43897 1013 aa10.8□□□□□ -0.68
FOXN3-217ENST00000557572 DACH1Q9UI36 760 aa10.8□□□□□ -0.68
FOXN3-217ENST00000557572 C11orf95C9JLR9 678 aaPredicted RBP10.79□□□□□ -0.68
FOXN3-217ENST00000557572 S1PR4O95977 384 aa10.79□□□□□ -0.68
FOXN3-217ENST00000557572 PRR14Q9BWN1 585 aa10.79□□□□□ -0.68
FOXN3-217ENST00000557572 PRIM1P49642 420 aaKnown RBP10.78□□□□□ -0.68
FOXN3-217ENST00000557572 PDIA6Q15084 440 aa10.78□□□□□ -0.68
FOXN3-217ENST00000557572 GMPR2Q9P2T1 348 aaKnown RBP10.78□□□□□ -0.68
FOXN3-217ENST00000557572 WIPF1O43516 503 aa10.77□□□□□ -0.69
FOXN3-217ENST00000557572 GRXCR2A6NFK2 248 aa10.76□□□□□ -0.69
FOXN3-217ENST00000557572 NFX1Q12986 1120 aaKnown RBP10.76□□□□□ -0.69
FOXN3-217ENST00000557572 FOXC1Q12948 553 aa10.75□□□□□ -0.69
FOXN3-217ENST00000557572 CDHR5Q9HBB8 845 aa10.75□□□□□ -0.69
FOXN3-217ENST00000557572 LOC100996750A0A140TA64 210 aa10.74□□□□□ -0.69
FOXN3-217ENST00000557572 KRTAP4-6Q9BYQ5 205 aa10.74□□□□□ -0.69
FOXN3-217ENST00000557572 SPDYE16A6NNV3 312 aaPredicted RBP10.73□□□□□ -0.69
FOXN3-217ENST00000557572 RBM27Q9P2N5 1060 aaKnown RBP10.73□□□□□ -0.69
FOXN3-217ENST00000557572 AXIN1O15169 862 aa10.71□□□□□ -0.69
FOXN3-217ENST00000557572 CRIPAKQ8N1N5 446 aa10.71□□□□□ -0.69
FOXN3-217ENST00000557572 PLA2G2CQ5R387 149 aa10.69□□□□□ -0.7
FOXN3-217ENST00000557572 PKD2L1Q9P0L9 805 aa10.69□□□□□ -0.7
FOXN3-217ENST00000557572 PADI6Q6TGC4 694 aa10.68□□□□□ -0.7
FOXN3-217ENST00000557572 TTC13Q8NBP0 860 aa10.66□□□□□ -0.7
FOXN3-217ENST00000557572 AVPP01185 164 aa10.65□□□□□ -0.7
FOXN3-217ENST00000557572 LMOD2Q6P5Q4 547 aa10.65□□□□□ -0.7
FOXN3-217ENST00000557572 ADH1BP00325 375 aa10.64□□□□□ -0.71
FOXN3-217ENST00000557572 SLC6A16Q9GZN6 736 aa10.64□□□□□ -0.71
FOXN3-217ENST00000557572 OSBPP22059 807 aa10.63□□□□□ -0.71
FOXN3-217ENST00000557572 CTC1Q2NKJ3 1217 aa10.63□□□□□ -0.71
FOXN3-217ENST00000557572 CYP4X1Q8N118 509 aa10.63□□□□□ -0.71
FOXN3-217ENST00000557572 EYA1Q99502 592 aa10.63□□□□□ -0.71
FOXN3-217ENST00000557572 ACTN4O43707 911 aaKnown RBP10.62□□□□□ -0.71
FOXN3-217ENST00000557572 KMT5BQ4FZB7 885 aa10.62□□□□□ -0.71
FOXN3-217ENST00000557572 TERTO14746 1132 aaKnown RBP10.61□□□□□ -0.71
FOXN3-217ENST00000557572 LCE2CQ5TA81 110 aa10.61□□□□□ -0.71
FOXN3-217ENST00000557572 TOR4AQ9NXH8 423 aa10.61□□□□□ -0.71
FOXN3-217ENST00000557572 FAM181BA6NEQ2 426 aa10.6□□□□□ -0.71
FOXN3-217ENST00000557572 NPDC1Q9NQX5 325 aaPredicted RBP10.59□□□□□ -0.71
FOXN3-217ENST00000557572 NR1I2O75469 434 aa10.58□□□□□ -0.72
FOXN3-217ENST00000557572 SMCPP49901 116 aaPredicted RBP10.57□□□□□ -0.72
FOXN3-217ENST00000557572 CFHP08603 1231 aa10.56□□□□□ -0.72
FOXN3-217ENST00000557572 SNRPBP14678 240 aaKnown RBP10.56□□□□□ -0.72
FOXN3-217ENST00000557572 CD2BP2O95400 341 aaKnown RBP10.54□□□□□ -0.72
FOXN3-217ENST00000557572 DCAF8L2P0C7V8 631 aa10.54□□□□□ -0.72
FOXN3-217ENST00000557572 DNAJB2P25686 324 aa10.54□□□□□ -0.72
FOXN3-217ENST00000557572 TTC24A2A3L6 582 aaPredicted RBP10.53□□□□□ -0.72
FOXN3-217ENST00000557572 RPIAP49247 311 aa10.53□□□□□ -0.72
FOXN3-217ENST00000557572 ATP13A2Q9NQ11 1180 aa10.53□□□□□ -0.72
FOXN3-217ENST00000557572 SCUBE3Q8IX30 993 aa10.51□□□□□ -0.73
FOXN3-217ENST00000557572 E2F4Q16254 413 aa10.5□□□□□ -0.73
FOXN3-217ENST00000557572 SPSB2Q99619 263 aa10.5□□□□□ -0.73
FOXN3-217ENST00000557572 TMEM134Q9H6X4 195 aa10.5□□□□□ -0.73
FOXN3-217ENST00000557572 SUZ12Q15022 739 aaKnown RBP10.49□□□□□ -0.73
FOXN3-217ENST00000557572 TRIM47Q96LD4 638 aa10.49□□□□□ -0.73
FOXN3-217ENST00000557572 SENP2Q9HC62 589 aa10.49□□□□□ -0.73
FOXN3-217ENST00000557572 ZSCAN1Q8NBB4 408 aa10.47□□□□□ -0.73
FOXN3-217ENST00000557572 RBM46Q8TBY0 533 aaKnown RBP10.47□□□□□ -0.73
FOXN3-217ENST00000557572 PUS10Q3MIT2 529 aaKnown RBP10.46□□□□□ -0.73
FOXN3-217ENST00000557572 SLC16A10Q8TF71 515 aa10.46□□□□□ -0.73
FOXN3-217ENST00000557572 FCF1Q9Y324 198 aaKnown RBP10.46□□□□□ -0.73
FOXN3-217ENST00000557572 ARIH1Q9Y4X5 557 aaPredicted RBP10.46□□□□□ -0.73
FOXN3-217ENST00000557572 SLC10A3P09131 477 aa10.44□□□□□ -0.74
FOXN3-217ENST00000557572 RCCD1A6NED2 376 aa10.43□□□□□ -0.74
FOXN3-217ENST00000557572 SMPD1P17405 629 aa10.42□□□□□ -0.74
FOXN3-217ENST00000557572 GMPRP36959 345 aa10.42□□□□□ -0.74
FOXN3-217ENST00000557572 KIFC2Q96AC6 838 aa10.41□□□□□ -0.74
FOXN3-217ENST00000557572 SNIP1Q8TAD8 396 aaKnown RBP10.4□□□□□ -0.74
FOXN3-217ENST00000557572 ZBTB24O43167 697 aaPredicted RBP10.39□□□□□ -0.75
FOXN3-217ENST00000557572 LORP23490 312 aaPredicted RBP10.39□□□□□ -0.75
FOXN3-217ENST00000557572 ADGRG1Q9Y653 693 aa10.39□□□□□ -0.75
FOXN3-217ENST00000557572 FAM161AQ3B820 660 aa10.37□□□□□ -0.75
FOXN3-217ENST00000557572 WDR70Q9NW82 654 aa10.37□□□□□ -0.75
FOXN3-217ENST00000557572 NXF1Q9UBU9 619 aaKnown RBP10.37□□□□□ -0.75
FOXN3-217ENST00000557572 J3QL48 77 aa10.36□□□□□ -0.75
FOXN3-217ENST00000557572 IRF7Q92985 503 aa10.35□□□□□ -0.75
FOXN3-217ENST00000557572 WNT7AO00755 349 aa10.34□□□□□ -0.75
FOXN3-217ENST00000557572 HPS1Q92902 700 aa10.33□□□□□ -0.76
FOXN3-217ENST00000557572 RSPH4AQ5TD94 716 aa10.32□□□□□ -0.76
FOXN3-217ENST00000557572 VEGFBP49765 207 aa10.31□□□□□ -0.76
FOXN3-217ENST00000557572 PTGDRQ13258 359 aa10.31□□□□□ -0.76
FOXN3-217ENST00000557572 FAM160A2Q8N612 972 aaPredicted RBP10.31□□□□□ -0.76
FOXN3-217ENST00000557572 MRGPRX2Q96LB1 330 aa10.31□□□□□ -0.76
FOXN3-217ENST00000557572 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.3□□□□□ -0.76
FOXN3-217ENST00000557572 PRDM9Q9NQV7 894 aa10.3□□□□□ -0.76
FOXN3-217ENST00000557572 FMNL1O95466 1100 aaPredicted RBP10.29□□□□□ -0.76
FOXN3-217ENST00000557572 THAP11Q96EK4 314 aa10.29□□□□□ -0.76
FOXN3-217ENST00000557572 MORN1Q5T089 497 aa10.28□□□□□ -0.76
FOXN3-217ENST00000557572 NPAS3Q8IXF0 933 aa10.26□□□□□ -0.77
FOXN3-217ENST00000557572 TRIM32Q13049 653 aa10.25□□□□□ -0.77
FOXN3-217ENST00000557572 KCTD17Q8N5Z5 321 aa10.25□□□□□ -0.77
FOXN3-217ENST00000557572 FECHP22830 423 aa10.24□□□□□ -0.77
FOXN3-217ENST00000557572 FUT2Q10981 343 aa10.23□□□□□ -0.77
FOXN3-217ENST00000557572 SLC27A5Q9Y2P5 690 aa10.23□□□□□ -0.77
FOXN3-217ENST00000557572 ERBB4Q15303 1308 aa10.23□□□□□ -0.77
FOXN3-217ENST00000557572 MLLT3P42568 568 aaPredicted RBP10.22□□□□□ -0.77
FOXN3-217ENST00000557572 REPIN1Q9BWE0 567 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms