RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 KCNA6P17658 529 aa22.85■■□□□ 1.25
CHD8-211ENST00000556833 PPARGC1BQ86YN6 1023 aaKnown RBP22.85■■□□□ 1.25
CHD8-211ENST00000556833 UNC13BO14795 1591 aa22.84■■□□□ 1.25
CHD8-211ENST00000556833 E9PCH4 1651 aa22.84■■□□□ 1.25
CHD8-211ENST00000556833 PPP1R15AO75807 674 aaPredicted RBP22.83■■□□□ 1.25
CHD8-211ENST00000556833 ITGAEP38570 1179 aa22.83■■□□□ 1.25
CHD8-211ENST00000556833 NUTM2DQ5VT03 806 aaPredicted RBP22.83■■□□□ 1.25
CHD8-211ENST00000556833 NWD1Q149M9 1564 aa22.83■■□□□ 1.25
CHD8-211ENST00000556833 TMEM131LA2VDJ0 1609 aa22.82■■□□□ 1.24
CHD8-211ENST00000556833 RPRD2Q5VT52 1461 aaKnown RBP22.82■■□□□ 1.24
CHD8-211ENST00000556833 SLC52A1Q9NWF4 448 aa22.82■■□□□ 1.24
CHD8-211ENST00000556833 RIMS2Q9UQ26 1411 aa22.82■■□□□ 1.24
CHD8-211ENST00000556833 ZFYVE9O95405 1425 aa22.8■■□□□ 1.24
CHD8-211ENST00000556833 CHD2O14647 1828 aaKnown RBP22.79■■□□□ 1.24
CHD8-211ENST00000556833 NKTRP30414 1462 aaKnown RBP22.79■■□□□ 1.24
CHD8-211ENST00000556833 FAM135BQ49AJ0 1406 aa22.77■■□□□ 1.24
CHD8-211ENST00000556833 PLEKHG1Q9ULL1 1385 aa22.76■■□□□ 1.23
CHD8-211ENST00000556833 IQGAP3Q86VI3 1631 aa22.75■■□□□ 1.23
CHD8-211ENST00000556833 RGS17Q9UGC6 210 aaPredicted RBP22.75■■□□□ 1.23
CHD8-211ENST00000556833 MSH6P52701 1360 aa22.75■■□□□ 1.23
CHD8-211ENST00000556833 PHLPP1O60346 1717 aa22.74■■□□□ 1.23
CHD8-211ENST00000556833 C14orf37Q86TY3 774 aa22.7■■□□□ 1.22
CHD8-211ENST00000556833 NUP155O75694 1391 aa22.69■■□□□ 1.22
CHD8-211ENST00000556833 ROCK1Q13464 1354 aa22.68■■□□□ 1.22
CHD8-211ENST00000556833 SLAIN2Q9P270 581 aa22.67■■□□□ 1.22
CHD8-211ENST00000556833 ADAMTS13Q76LX8 1427 aa22.66■■□□□ 1.22
CHD8-211ENST00000556833 HDGFP51858 240 aaKnown RBP22.66■■□□□ 1.22
CHD8-211ENST00000556833 POTEAQ6S8J7 498 aa22.65■■□□□ 1.22
CHD8-211ENST00000556833 SPHKAPQ2M3C7 1700 aa22.65■■□□□ 1.22
CHD8-211ENST00000556833 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.65■■□□□ 1.22
CHD8-211ENST00000556833 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.64■■□□□ 1.21
CHD8-211ENST00000556833 TBX22Q9Y458 520 aa22.63■■□□□ 1.21
CHD8-211ENST00000556833 DIP2AQ14689 1571 aa22.63■■□□□ 1.21
CHD8-211ENST00000556833 SETD1AO15047 1707 aaKnown RBP22.62■■□□□ 1.21
CHD8-211ENST00000556833 COL16A1Q07092 1604 aaPredicted RBP22.61■■□□□ 1.21
CHD8-211ENST00000556833 TRPM2O94759 1503 aa22.6■■□□□ 1.21
CHD8-211ENST00000556833 PTPRUQ92729 1446 aa22.59■■□□□ 1.21
CHD8-211ENST00000556833 NRXN3Q9Y4C0 1643 aa22.58■■□□□ 1.21
CHD8-211ENST00000556833 ZNF326Q5BKZ1 582 aaKnown RBP22.57■■□□□ 1.2
CHD8-211ENST00000556833 JCADQ9P266 1359 aa22.56■■□□□ 1.2
CHD8-211ENST00000556833 AMOTL2Q9Y2J4 779 aa22.56■■□□□ 1.2
CHD8-211ENST00000556833 ATF3P18847 181 aa22.55■■□□□ 1.2
CHD8-211ENST00000556833 CLTCL1P53675 1640 aa22.54■■□□□ 1.2
CHD8-211ENST00000556833 LRP6O75581 1613 aa22.53■■□□□ 1.2
CHD8-211ENST00000556833 XRN1Q8IZH2 1706 aaKnown RBP22.53■■□□□ 1.2
CHD8-211ENST00000556833 PIK3R4Q99570 1358 aa22.51■■□□□ 1.19
CHD8-211ENST00000556833 CADPS2Q86UW7 1296 aa22.51■■□□□ 1.19
CHD8-211ENST00000556833 C19orf44Q9H6X5 657 aa22.51■■□□□ 1.19
CHD8-211ENST00000556833 AHDC1Q5TGY3 1603 aaPredicted RBP22.5■■□□□ 1.19
CHD8-211ENST00000556833 NCOA3Q9Y6Q9 1424 aa22.5■■□□□ 1.19
CHD8-211ENST00000556833 MEX3CQ5U5Q3 659 aaKnown RBP22.5■■□□□ 1.19
CHD8-211ENST00000556833 SETBP1Q9Y6X0 1596 aa22.5■■□□□ 1.19
CHD8-211ENST00000556833 KIF1BO60333 1816 aa22.49■■□□□ 1.19
CHD8-211ENST00000556833 SHPRHQ149N8 1683 aa22.48■■□□□ 1.19
CHD8-211ENST00000556833 METP08581 1390 aa22.48■■□□□ 1.19
CHD8-211ENST00000556833 NEXMIFQ5QGS0 1516 aa22.47■■□□□ 1.19
CHD8-211ENST00000556833 NUTM2BA6NNL0 878 aaPredicted RBP22.46■■□□□ 1.19
CHD8-211ENST00000556833 NUTM2EB1AL46 878 aaPredicted RBP22.46■■□□□ 1.19
CHD8-211ENST00000556833 BRINP3Q76B58 766 aa22.46■■□□□ 1.19
CHD8-211ENST00000556833 NUTM2AQ8IVF1 878 aaPredicted RBP22.46■■□□□ 1.19
CHD8-211ENST00000556833 NALCNQ8IZF0 1738 aa22.45■■□□□ 1.18
CHD8-211ENST00000556833 ASXL1Q8IXJ9 1541 aa22.44■■□□□ 1.18
CHD8-211ENST00000556833 NAIPQ13075 1403 aa22.42■■□□□ 1.18
CHD8-211ENST00000556833 DDX17Q92841 729 aaKnown RBP22.42■■□□□ 1.18
CHD8-211ENST00000556833 MST1RQ04912 1400 aa22.41■■□□□ 1.18
CHD8-211ENST00000556833 RRBP1Q9P2E9 1410 aaKnown RBP22.41■■□□□ 1.18
CHD8-211ENST00000556833 SPATA31A6Q5VVP1 1343 aa22.41■■□□□ 1.18
CHD8-211ENST00000556833 TRIM52Q96A61 297 aa22.41■■□□□ 1.18
CHD8-211ENST00000556833 NHSL1Q5SYE7 1610 aa22.4■■□□□ 1.18
CHD8-211ENST00000556833 DCCP43146 1447 aa22.39■■□□□ 1.17
CHD8-211ENST00000556833 ADGRL3Q9HAR2 1447 aa22.37■■□□□ 1.17
CHD8-211ENST00000556833 ZNF772Q68DY9 489 aaPredicted RBP22.33■■□□□ 1.17
CHD8-211ENST00000556833 FOXD1Q16676 465 aa22.32■■□□□ 1.16
CHD8-211ENST00000556833 PPLO60437 1756 aa22.32■■□□□ 1.16
CHD8-211ENST00000556833 AFF2P51816 1311 aa22.31■■□□□ 1.16
CHD8-211ENST00000556833 SLC4A1APQ9BWU0 796 aaKnown RBP22.3■■□□□ 1.16
CHD8-211ENST00000556833 SETD5Q9C0A6 1442 aa22.3■■□□□ 1.16
CHD8-211ENST00000556833 HFM1A2PYH4 1435 aa22.29■■□□□ 1.16
CHD8-211ENST00000556833 ROBO2Q9HCK4 1378 aa22.28■■□□□ 1.16
CHD8-211ENST00000556833 C8orf37Q96NL8 207 aa22.28■■□□□ 1.16
CHD8-211ENST00000556833 C1orf167Q5SNV9 1468 aa22.27■■□□□ 1.16
CHD8-211ENST00000556833 PNPLA6Q8IY17 1366 aa22.26■■□□□ 1.15
CHD8-211ENST00000556833 RXRBP28702 533 aa22.26■■□□□ 1.15
CHD8-211ENST00000556833 VGFO15240 615 aaPredicted RBP22.25■■□□□ 1.15
CHD8-211ENST00000556833 LRRC59Q96AG4 307 aaKnown RBP22.25■■□□□ 1.15
CHD8-211ENST00000556833 PTCH1Q13635 1447 aa22.24■■□□□ 1.15
CHD8-211ENST00000556833 ADAMTS2O95450 1211 aa22.24■■□□□ 1.15
CHD8-211ENST00000556833 ORAI2Q96SN7 254 aa22.24■■□□□ 1.15
CHD8-211ENST00000556833 UPF1Q92900 1129 aaKnown RBP eCLIP22.22■■□□□ 1.15
CHD8-211ENST00000556833 RGL3Q3MIN7 710 aa22.19■■□□□ 1.14
CHD8-211ENST00000556833 STK26Q9P289 416 aa22.18■■□□□ 1.14
CHD8-211ENST00000556833 RGS12O14924 1447 aa22.17■■□□□ 1.14
CHD8-211ENST00000556833 RPGRIP1LQ68CZ1 1315 aa22.17■■□□□ 1.14
CHD8-211ENST00000556833 ADGRF5Q8IZF2 1346 aa22.17■■□□□ 1.14
CHD8-211ENST00000556833 LAMC1P11047 1609 aa22.17■■□□□ 1.14
CHD8-211ENST00000556833 NUTM2FA1L443 756 aa22.16■■□□□ 1.14
CHD8-211ENST00000556833 NGLY1Q96IV0 654 aa22.16■■□□□ 1.14
CHD8-211ENST00000556833 QTRT2Q9H974 415 aaKnown RBP22.16■■□□□ 1.14
CHD8-211ENST00000556833 IFT172Q9UG01 1749 aa22.16■■□□□ 1.14
CHD8-211ENST00000556833 XPCQ01831 940 aaPredicted RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms