RNA–Protein interactions for RNA: ENST00000556562.1

RNF34-209, Transcript of ring finger protein 34, humanhuman

TSL 2

Gene RNF34, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34-209ENST00000556562 ZFYVE9O95405 1425 aa27.48■■□□□ 1.99
RNF34-209ENST00000556562 ITGAEP38570 1179 aa27.47■■□□□ 1.99
RNF34-209ENST00000556562 GCC2Q8IWJ2 1684 aa27.46■■□□□ 1.99
RNF34-209ENST00000556562 RIMS2Q9UQ26 1411 aa27.45■■□□□ 1.98
RNF34-209ENST00000556562 PROSER2Q86WR7 435 aaPredicted RBP27.45■■□□□ 1.98
RNF34-209ENST00000556562 NWD1Q149M9 1564 aa27.44■■□□□ 1.98
RNF34-209ENST00000556562 MYO5BQ9ULV0 1848 aa27.44■■□□□ 1.98
RNF34-209ENST00000556562 PPP1R15AO75807 674 aaPredicted RBP27.43■■□□□ 1.98
RNF34-209ENST00000556562 CHGAP10645 457 aaKnown RBP27.43■■□□□ 1.98
RNF34-209ENST00000556562 TMEM131LA2VDJ0 1609 aa27.42■■□□□ 1.98
RNF34-209ENST00000556562 ROCK1Q13464 1354 aa27.42■■□□□ 1.98
RNF34-209ENST00000556562 E9PCH4 1651 aa27.41■■□□□ 1.98
RNF34-209ENST00000556562 NKTRP30414 1462 aaKnown RBP27.41■■□□□ 1.98
RNF34-209ENST00000556562 PLEKHG1Q9ULL1 1385 aa27.41■■□□□ 1.98
RNF34-209ENST00000556562 NUTM2DQ5VT03 806 aaPredicted RBP27.41■■□□□ 1.98
RNF34-209ENST00000556562 FAM135BQ49AJ0 1406 aa27.39■■□□□ 1.97
RNF34-209ENST00000556562 IQGAP3Q86VI3 1631 aa27.38■■□□□ 1.97
RNF34-209ENST00000556562 NUP155O75694 1391 aa27.36■■□□□ 1.97
RNF34-209ENST00000556562 ROBO1Q9Y6N7 1651 aa27.35■■□□□ 1.97
RNF34-209ENST00000556562 MSH6P52701 1360 aa27.32■■□□□ 1.96
RNF34-209ENST00000556562 ADAMTS13Q76LX8 1427 aa27.32■■□□□ 1.96
RNF34-209ENST00000556562 RGS17Q9UGC6 210 aaPredicted RBP27.3■■□□□ 1.96
RNF34-209ENST00000556562 HDGFP51858 240 aaKnown RBP27.27■■□□□ 1.96
RNF34-209ENST00000556562 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.27■■□□□ 1.96
RNF34-209ENST00000556562 CHD2O14647 1828 aaKnown RBP27.26■■□□□ 1.95
RNF34-209ENST00000556562 TBX22Q9Y458 520 aa27.26■■□□□ 1.95
RNF34-209ENST00000556562 SLAIN2Q9P270 581 aa27.24■■□□□ 1.95
RNF34-209ENST00000556562 C14orf37Q86TY3 774 aa27.22■■□□□ 1.95
RNF34-209ENST00000556562 DIP2AQ14689 1571 aa27.2■■□□□ 1.94
RNF34-209ENST00000556562 PTPRUQ92729 1446 aa27.19■■□□□ 1.94
RNF34-209ENST00000556562 PHLPP1O60346 1717 aa27.16■■□□□ 1.94
RNF34-209ENST00000556562 SPHKAPQ2M3C7 1700 aa27.16■■□□□ 1.94
RNF34-209ENST00000556562 TRPM2O94759 1503 aa27.16■■□□□ 1.94
RNF34-209ENST00000556562 POTEAQ6S8J7 498 aa27.15■■□□□ 1.94
RNF34-209ENST00000556562 PIK3R4Q99570 1358 aa27.14■■□□□ 1.94
RNF34-209ENST00000556562 AMOTL2Q9Y2J4 779 aa27.14■■□□□ 1.94
RNF34-209ENST00000556562 NRXN3Q9Y4C0 1643 aa27.14■■□□□ 1.94
RNF34-209ENST00000556562 RRBP1Q9P2E9 1410 aaKnown RBP27.13■■□□□ 1.93
RNF34-209ENST00000556562 ZNF326Q5BKZ1 582 aaKnown RBP27.12■■□□□ 1.93
RNF34-209ENST00000556562 NCOA3Q9Y6Q9 1424 aa27.12■■□□□ 1.93
RNF34-209ENST00000556562 COL16A1Q07092 1604 aaPredicted RBP27.12■■□□□ 1.93
RNF34-209ENST00000556562 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.11■■□□□ 1.93
RNF34-209ENST00000556562 JCADQ9P266 1359 aa27.1■■□□□ 1.93
RNF34-209ENST00000556562 NAIPQ13075 1403 aa27.1■■□□□ 1.93
RNF34-209ENST00000556562 CLTCL1P53675 1640 aa27.1■■□□□ 1.93
RNF34-209ENST00000556562 SETBP1Q9Y6X0 1596 aa27.09■■□□□ 1.93
RNF34-209ENST00000556562 C19orf44Q9H6X5 657 aa27.08■■□□□ 1.93
RNF34-209ENST00000556562 ATF3P18847 181 aa27.07■■□□□ 1.92
RNF34-209ENST00000556562 CADPS2Q86UW7 1296 aa27.07■■□□□ 1.92
RNF34-209ENST00000556562 METP08581 1390 aa27.07■■□□□ 1.92
RNF34-209ENST00000556562 XRN1Q8IZH2 1706 aaKnown RBP27.07■■□□□ 1.92
RNF34-209ENST00000556562 LRP6O75581 1613 aa27.05■■□□□ 1.92
RNF34-209ENST00000556562 NEXMIFQ5QGS0 1516 aa27.05■■□□□ 1.92
RNF34-209ENST00000556562 AHDC1Q5TGY3 1603 aaPredicted RBP27.02■■□□□ 1.92
RNF34-209ENST00000556562 BRINP3Q76B58 766 aa27.01■■□□□ 1.91
RNF34-209ENST00000556562 TRIM52Q96A61 297 aa26.98■■□□□ 1.91
RNF34-209ENST00000556562 MST1RQ04912 1400 aa26.97■■□□□ 1.91
RNF34-209ENST00000556562 ASXL1Q8IXJ9 1541 aa26.96■■□□□ 1.91
RNF34-209ENST00000556562 HFM1A2PYH4 1435 aa26.96■■□□□ 1.91
RNF34-209ENST00000556562 DCCP43146 1447 aa26.96■■□□□ 1.91
RNF34-209ENST00000556562 SETD1AO15047 1707 aaKnown RBP26.95■■□□□ 1.9
RNF34-209ENST00000556562 SPATA31A6Q5VVP1 1343 aa26.93■■□□□ 1.9
RNF34-209ENST00000556562 MEX3CQ5U5Q3 659 aaKnown RBP26.93■■□□□ 1.9
RNF34-209ENST00000556562 ADGRL3Q9HAR2 1447 aa26.92■■□□□ 1.9
RNF34-209ENST00000556562 SHPRHQ149N8 1683 aa26.91■■□□□ 1.9
RNF34-209ENST00000556562 DDX17Q92841 729 aaKnown RBP26.9■■□□□ 1.9
RNF34-209ENST00000556562 NALCNQ8IZF0 1738 aa26.9■■□□□ 1.9
RNF34-209ENST00000556562 KIF1BO60333 1816 aa26.89■■□□□ 1.9
RNF34-209ENST00000556562 NUTM2BA6NNL0 878 aaPredicted RBP26.89■■□□□ 1.9
RNF34-209ENST00000556562 NUTM2EB1AL46 878 aaPredicted RBP26.89■■□□□ 1.9
RNF34-209ENST00000556562 NUTM2AQ8IVF1 878 aaPredicted RBP26.89■■□□□ 1.9
RNF34-209ENST00000556562 SLC4A1APQ9BWU0 796 aaKnown RBP26.89■■□□□ 1.9
RNF34-209ENST00000556562 FOXD1Q16676 465 aa26.88■■□□□ 1.89
RNF34-209ENST00000556562 ROBO2Q9HCK4 1378 aa26.85■■□□□ 1.89
RNF34-209ENST00000556562 NHSL1Q5SYE7 1610 aa26.84■■□□□ 1.89
RNF34-209ENST00000556562 PTCH1Q13635 1447 aa26.82■■□□□ 1.88
RNF34-209ENST00000556562 SETD5Q9C0A6 1442 aa26.82■■□□□ 1.88
RNF34-209ENST00000556562 VGFO15240 615 aaPredicted RBP26.8■■□□□ 1.88
RNF34-209ENST00000556562 C1orf167Q5SNV9 1468 aa26.8■■□□□ 1.88
RNF34-209ENST00000556562 ZNF772Q68DY9 489 aaPredicted RBP26.79■■□□□ 1.88
RNF34-209ENST00000556562 PNPLA6Q8IY17 1366 aa26.77■■□□□ 1.88
RNF34-209ENST00000556562 RPGRIP1LQ68CZ1 1315 aa26.76■■□□□ 1.87
RNF34-209ENST00000556562 PPLO60437 1756 aa26.76■■□□□ 1.87
RNF34-209ENST00000556562 AFF2P51816 1311 aa26.75■■□□□ 1.87
RNF34-209ENST00000556562 LRRC59Q96AG4 307 aaKnown RBP26.74■■□□□ 1.87
RNF34-209ENST00000556562 ORAI2Q96SN7 254 aa26.74■■□□□ 1.87
RNF34-209ENST00000556562 PRAG1Q86YV5 1406 aa26.73■■□□□ 1.87
RNF34-209ENST00000556562 ADGRF5Q8IZF2 1346 aa26.72■■□□□ 1.87
RNF34-209ENST00000556562 CCDC144AA2RUR9 1427 aa26.71■■□□□ 1.87
RNF34-209ENST00000556562 RGL3Q3MIN7 710 aa26.7■■□□□ 1.86
RNF34-209ENST00000556562 C8orf37Q96NL8 207 aa26.7■■□□□ 1.86
RNF34-209ENST00000556562 SPATA31E1Q6ZUB1 1445 aa26.68■■□□□ 1.86
RNF34-209ENST00000556562 RXRBP28702 533 aa26.68■■□□□ 1.86
RNF34-209ENST00000556562 ADAMTS2O95450 1211 aa26.66■■□□□ 1.86
RNF34-209ENST00000556562 MPHOSPH9Q99550 1183 aa26.66■■□□□ 1.86
RNF34-209ENST00000556562 STK26Q9P289 416 aa26.65■■□□□ 1.86
RNF34-209ENST00000556562 LAMC1P11047 1609 aa26.64■■□□□ 1.85
RNF34-209ENST00000556562 SOS2Q07890 1332 aaPredicted RBP26.64■■□□□ 1.85
RNF34-209ENST00000556562 UPF1Q92900 1129 aaKnown RBP eCLIP26.63■■□□□ 1.85
RNF34-209ENST00000556562 CDC42BPGQ6DT37 1551 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms