RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 GCC2Q8IWJ2 1684 aa34.44■■■■□ 3.1
ACTN1-220ENST00000556433 PPP1R15AO75807 674 aaPredicted RBP34.43■■■■□ 3.1
ACTN1-220ENST00000556433 PROSER2Q86WR7 435 aaPredicted RBP34.41■■■■□ 3.1
ACTN1-220ENST00000556433 RIMS2Q9UQ26 1411 aa34.4■■■■□ 3.1
ACTN1-220ENST00000556433 ZFYVE9O95405 1425 aa34.39■■■■□ 3.1
ACTN1-220ENST00000556433 TMEM94Q12767 1356 aa34.38■■■■□ 3.09
ACTN1-220ENST00000556433 E9PCH4 1651 aa34.38■■■■□ 3.09
ACTN1-220ENST00000556433 IQGAP3Q86VI3 1631 aa34.38■■■■□ 3.09
ACTN1-220ENST00000556433 PLEKHG1Q9ULL1 1385 aa34.36■■■■□ 3.09
ACTN1-220ENST00000556433 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.36■■■■□ 3.09
ACTN1-220ENST00000556433 RBM33Q96EV2 1170 aaKnown RBP34.36■■■■□ 3.09
ACTN1-220ENST00000556433 TMEM131LA2VDJ0 1609 aa34.36■■■■□ 3.09
ACTN1-220ENST00000556433 XIRP1Q702N8 1843 aaKnown RBP34.33■■■■□ 3.09
ACTN1-220ENST00000556433 MYO5BQ9ULV0 1848 aa34.33■■■■□ 3.09
ACTN1-220ENST00000556433 NUTM2DQ5VT03 806 aaPredicted RBP34.33■■■■□ 3.09
ACTN1-220ENST00000556433 RRBP1Q9P2E9 1410 aaKnown RBP34.31■■■■□ 3.08
ACTN1-220ENST00000556433 TBX22Q9Y458 520 aa34.29■■■■□ 3.08
ACTN1-220ENST00000556433 MED1Q15648 1581 aaPredicted RBP34.26■■■■□ 3.07
ACTN1-220ENST00000556433 NKTRP30414 1462 aaKnown RBP34.25■■■■□ 3.07
ACTN1-220ENST00000556433 NWD1Q149M9 1564 aa34.23■■■■□ 3.07
ACTN1-220ENST00000556433 FAM135BQ49AJ0 1406 aa34.22■■■■□ 3.07
ACTN1-220ENST00000556433 MSH6P52701 1360 aa34.18■■■■□ 3.06
ACTN1-220ENST00000556433 NAIPQ13075 1403 aa34.17■■■■□ 3.06
ACTN1-220ENST00000556433 ADAMTS13Q76LX8 1427 aa34.17■■■■□ 3.06
ACTN1-220ENST00000556433 PHF23Q9BUL5 403 aaPredicted RBP34.17■■■■□ 3.06
ACTN1-220ENST00000556433 CHD2O14647 1828 aaKnown RBP34.15■■■■□ 3.06
ACTN1-220ENST00000556433 ZNF326Q5BKZ1 582 aaKnown RBP34.14■■■■□ 3.06
ACTN1-220ENST00000556433 SLAIN2Q9P270 581 aa34.12■■■■□ 3.05
ACTN1-220ENST00000556433 TRIM52Q96A61 297 aa34.11■■■■□ 3.05
ACTN1-220ENST00000556433 C14orf37Q86TY3 774 aa34.1■■■■□ 3.05
ACTN1-220ENST00000556433 PIK3R4Q99570 1358 aa34.1■■■■□ 3.05
ACTN1-220ENST00000556433 SPHKAPQ2M3C7 1700 aa34.08■■■■□ 3.05
ACTN1-220ENST00000556433 AMOTL2Q9Y2J4 779 aa34.07■■■■□ 3.04
ACTN1-220ENST00000556433 DIP2AQ14689 1571 aa34.06■■■■□ 3.04
ACTN1-220ENST00000556433 NCOA3Q9Y6Q9 1424 aa34.05■■■■□ 3.04
ACTN1-220ENST00000556433 HFM1A2PYH4 1435 aa34.04■■■■□ 3.04
ACTN1-220ENST00000556433 ROBO1Q9Y6N7 1651 aa34.03■■■■□ 3.04
ACTN1-220ENST00000556433 C19orf44Q9H6X5 657 aa34.01■■■■□ 3.03
ACTN1-220ENST00000556433 TRPM2O94759 1503 aa34■■■■□ 3.03
ACTN1-220ENST00000556433 PTPRUQ92729 1446 aa33.99■■■■□ 3.03
ACTN1-220ENST00000556433 SLC4A1APQ9BWU0 796 aaKnown RBP33.98■■■■□ 3.03
ACTN1-220ENST00000556433 ATF3P18847 181 aa33.97■■■■□ 3.03
ACTN1-220ENST00000556433 CADPS2Q86UW7 1296 aa33.97■■■■□ 3.03
ACTN1-220ENST00000556433 CLTCL1P53675 1640 aa33.97■■■■□ 3.03
ACTN1-220ENST00000556433 SETBP1Q9Y6X0 1596 aa33.93■■■■□ 3.02
ACTN1-220ENST00000556433 METP08581 1390 aa33.91■■■■□ 3.02
ACTN1-220ENST00000556433 RGS17Q9UGC6 210 aaPredicted RBP33.91■■■■□ 3.02
ACTN1-220ENST00000556433 NRXN3Q9Y4C0 1643 aa33.9■■■■□ 3.02
ACTN1-220ENST00000556433 NEXMIFQ5QGS0 1516 aa33.89■■■■□ 3.02
ACTN1-220ENST00000556433 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.87■■■■□ 3.01
ACTN1-220ENST00000556433 KIF1BO60333 1816 aa33.86■■■■□ 3.01
ACTN1-220ENST00000556433 VGFO15240 615 aaPredicted RBP33.85■■■■□ 3.01
ACTN1-220ENST00000556433 PHLPP1O60346 1717 aa33.84■■■■□ 3.01
ACTN1-220ENST00000556433 JCADQ9P266 1359 aa33.84■■■■□ 3.01
ACTN1-220ENST00000556433 FOXD1Q16676 465 aa33.83■■■■□ 3.01
ACTN1-220ENST00000556433 RPGRIP1LQ68CZ1 1315 aa33.81■■■■□ 3
ACTN1-220ENST00000556433 XRN1Q8IZH2 1706 aaKnown RBP33.8■■■■□ 3
ACTN1-220ENST00000556433 BRINP3Q76B58 766 aa33.77■■■■□ 3
ACTN1-220ENST00000556433 DCCP43146 1447 aa33.76■■■□□ 2.99
ACTN1-220ENST00000556433 MPHOSPH9Q99550 1183 aa33.75■■■□□ 2.99
ACTN1-220ENST00000556433 POTEAQ6S8J7 498 aa33.73■■■□□ 2.99
ACTN1-220ENST00000556433 COL16A1Q07092 1604 aaPredicted RBP33.72■■■□□ 2.99
ACTN1-220ENST00000556433 AHDC1Q5TGY3 1603 aaPredicted RBP33.68■■■□□ 2.98
ACTN1-220ENST00000556433 MST1RQ04912 1400 aa33.68■■■□□ 2.98
ACTN1-220ENST00000556433 ADGRL3Q9HAR2 1447 aa33.68■■■□□ 2.98
ACTN1-220ENST00000556433 SPATA31A6Q5VVP1 1343 aa33.67■■■□□ 2.98
ACTN1-220ENST00000556433 CCDC144AA2RUR9 1427 aa33.66■■■□□ 2.98
ACTN1-220ENST00000556433 RGL3Q3MIN7 710 aa33.66■■■□□ 2.98
ACTN1-220ENST00000556433 ROBO2Q9HCK4 1378 aa33.62■■■□□ 2.97
ACTN1-220ENST00000556433 MEX3CQ5U5Q3 659 aaKnown RBP33.62■■■□□ 2.97
ACTN1-220ENST00000556433 ASXL1Q8IXJ9 1541 aa33.61■■■□□ 2.97
ACTN1-220ENST00000556433 PTCH1Q13635 1447 aa33.61■■■□□ 2.97
ACTN1-220ENST00000556433 ACIN1Q9UKV3 1341 aaKnown RBP33.6■■■□□ 2.97
ACTN1-220ENST00000556433 PPLO60437 1756 aa33.6■■■□□ 2.97
ACTN1-220ENST00000556433 ADGRF5Q8IZF2 1346 aa33.59■■■□□ 2.97
ACTN1-220ENST00000556433 SETD1AO15047 1707 aaKnown RBP33.57■■■□□ 2.96
ACTN1-220ENST00000556433 SETD5Q9C0A6 1442 aa33.57■■■□□ 2.96
ACTN1-220ENST00000556433 LRP6O75581 1613 aa33.57■■■□□ 2.96
ACTN1-220ENST00000556433 SPATA31E1Q6ZUB1 1445 aa33.56■■■□□ 2.96
ACTN1-220ENST00000556433 DDX17Q92841 729 aaKnown RBP33.56■■■□□ 2.96
ACTN1-220ENST00000556433 NUTM2BA6NNL0 878 aaPredicted RBP33.55■■■□□ 2.96
ACTN1-220ENST00000556433 NUTM2EB1AL46 878 aaPredicted RBP33.55■■■□□ 2.96
ACTN1-220ENST00000556433 NUTM2AQ8IVF1 878 aaPredicted RBP33.55■■■□□ 2.96
ACTN1-220ENST00000556433 LRRC59Q96AG4 307 aaKnown RBP33.55■■■□□ 2.96
ACTN1-220ENST00000556433 NALCNQ8IZF0 1738 aa33.54■■■□□ 2.96
ACTN1-220ENST00000556433 ANKRD30BQ9BXX2 1392 aa33.53■■■□□ 2.96
ACTN1-220ENST00000556433 C1orf167Q5SNV9 1468 aa33.52■■■□□ 2.96
ACTN1-220ENST00000556433 PRAG1Q86YV5 1406 aa33.52■■■□□ 2.96
ACTN1-220ENST00000556433 SHPRHQ149N8 1683 aa33.52■■■□□ 2.96
ACTN1-220ENST00000556433 ZNF772Q68DY9 489 aaPredicted RBP33.49■■■□□ 2.95
ACTN1-220ENST00000556433 STK26Q9P289 416 aa33.49■■■□□ 2.95
ACTN1-220ENST00000556433 ORAI2Q96SN7 254 aa33.48■■■□□ 2.95
ACTN1-220ENST00000556433 NHSL1Q5SYE7 1610 aa33.46■■■□□ 2.95
ACTN1-220ENST00000556433 TMEM132EQ6IEE7 984 aa33.45■■■□□ 2.95
ACTN1-220ENST00000556433 RAB3GAP2Q9H2M9 1393 aa33.43■■■□□ 2.94
ACTN1-220ENST00000556433 WAPLQ7Z5K2 1190 aa33.42■■■□□ 2.94
ACTN1-220ENST00000556433 LRPPRCP42704 1394 aaKnown RBP33.41■■■□□ 2.94
ACTN1-220ENST00000556433 PNPLA6Q8IY17 1366 aa33.39■■■□□ 2.94
ACTN1-220ENST00000556433 ABCC11Q96J66 1382 aa33.38■■■□□ 2.93
ACTN1-220ENST00000556433 PIK3C2GO75747 1445 aa33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms