RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 PPP1R15AO75807 674 aaPredicted RBP26.06■■□□□ 1.76
GPHN-211ENST00000556020 ALKQ9UM73 1620 aa26.06■■□□□ 1.76
GPHN-211ENST00000556020 RIMS2Q9UQ26 1411 aa26.05■■□□□ 1.76
GPHN-211ENST00000556020 HSPA1LP34931 641 aa26.05■■□□□ 1.76
GPHN-211ENST00000556020 XIRP1Q702N8 1843 aaKnown RBP26.04■■□□□ 1.76
GPHN-211ENST00000556020 ZFYVE9O95405 1425 aa26.04■■□□□ 1.76
GPHN-211ENST00000556020 NUTM2DQ5VT03 806 aaPredicted RBP26.02■■□□□ 1.76
GPHN-211ENST00000556020 NAIPQ13075 1403 aa26.01■■□□□ 1.75
GPHN-211ENST00000556020 SPHKAPQ2M3C7 1700 aa26.01■■□□□ 1.75
GPHN-211ENST00000556020 HDGFP51858 240 aaKnown RBP26■■□□□ 1.75
GPHN-211ENST00000556020 KCNA6P17658 529 aa25.99■■□□□ 1.75
GPHN-211ENST00000556020 PLEKHG1Q9ULL1 1385 aa25.98■■□□□ 1.75
GPHN-211ENST00000556020 RBM33Q96EV2 1170 aaKnown RBP25.97■■□□□ 1.75
GPHN-211ENST00000556020 PROSER2Q86WR7 435 aaPredicted RBP25.96■■□□□ 1.75
GPHN-211ENST00000556020 TMEM94Q12767 1356 aa25.95■■□□□ 1.75
GPHN-211ENST00000556020 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.95■■□□□ 1.74
GPHN-211ENST00000556020 TRIM52Q96A61 297 aa25.94■■□□□ 1.74
GPHN-211ENST00000556020 NWD1Q149M9 1564 aa25.94■■□□□ 1.74
GPHN-211ENST00000556020 CHD2O14647 1828 aaKnown RBP25.91■■□□□ 1.74
GPHN-211ENST00000556020 HFM1A2PYH4 1435 aa25.91■■□□□ 1.74
GPHN-211ENST00000556020 NKTRP30414 1462 aaKnown RBP25.91■■□□□ 1.74
GPHN-211ENST00000556020 ILDR2Q71H61 639 aa25.9■■□□□ 1.74
GPHN-211ENST00000556020 ZNF326Q5BKZ1 582 aaKnown RBP25.88■■□□□ 1.73
GPHN-211ENST00000556020 CLTCL1P53675 1640 aa25.88■■□□□ 1.73
GPHN-211ENST00000556020 TBX22Q9Y458 520 aa25.86■■□□□ 1.73
GPHN-211ENST00000556020 ADAMTS13Q76LX8 1427 aa25.86■■□□□ 1.73
GPHN-211ENST00000556020 TRPM2O94759 1503 aa25.85■■□□□ 1.73
GPHN-211ENST00000556020 DIP2AQ14689 1571 aa25.84■■□□□ 1.73
GPHN-211ENST00000556020 MED1Q15648 1581 aaPredicted RBP25.83■■□□□ 1.73
GPHN-211ENST00000556020 KIF1BO60333 1816 aa25.83■■□□□ 1.73
GPHN-211ENST00000556020 SLC4A1APQ9BWU0 796 aaKnown RBP25.81■■□□□ 1.72
GPHN-211ENST00000556020 MSH6P52701 1360 aa25.81■■□□□ 1.72
GPHN-211ENST00000556020 C14orf37Q86TY3 774 aa25.79■■□□□ 1.72
GPHN-211ENST00000556020 ROBO1Q9Y6N7 1651 aa25.78■■□□□ 1.72
GPHN-211ENST00000556020 NRXN3Q9Y4C0 1643 aa25.77■■□□□ 1.72
GPHN-211ENST00000556020 NEXMIFQ5QGS0 1516 aa25.75■■□□□ 1.71
GPHN-211ENST00000556020 FAM135BQ49AJ0 1406 aa25.75■■□□□ 1.71
GPHN-211ENST00000556020 PIK3R4Q99570 1358 aa25.75■■□□□ 1.71
GPHN-211ENST00000556020 SETBP1Q9Y6X0 1596 aa25.74■■□□□ 1.71
GPHN-211ENST00000556020 FOXD1Q16676 465 aa25.73■■□□□ 1.71
GPHN-211ENST00000556020 AMOTL2Q9Y2J4 779 aa25.73■■□□□ 1.71
GPHN-211ENST00000556020 PTPRUQ92729 1446 aa25.72■■□□□ 1.71
GPHN-211ENST00000556020 SLAIN2Q9P270 581 aa25.7■■□□□ 1.7
GPHN-211ENST00000556020 PHF23Q9BUL5 403 aaPredicted RBP25.69■■□□□ 1.7
GPHN-211ENST00000556020 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.68■■□□□ 1.7
GPHN-211ENST00000556020 XRN1Q8IZH2 1706 aaKnown RBP25.68■■□□□ 1.7
GPHN-211ENST00000556020 METP08581 1390 aa25.67■■□□□ 1.7
GPHN-211ENST00000556020 NCOA3Q9Y6Q9 1424 aa25.66■■□□□ 1.7
GPHN-211ENST00000556020 SOCS7O14512 581 aa25.65■■□□□ 1.7
GPHN-211ENST00000556020 PHLPP1O60346 1717 aa25.64■■□□□ 1.7
GPHN-211ENST00000556020 ATF3P18847 181 aa25.64■■□□□ 1.7
GPHN-211ENST00000556020 MPHOSPH9Q99550 1183 aa25.63■■□□□ 1.69
GPHN-211ENST00000556020 C19orf44Q9H6X5 657 aa25.63■■□□□ 1.69
GPHN-211ENST00000556020 PPLO60437 1756 aa25.62■■□□□ 1.69
GPHN-211ENST00000556020 VGFO15240 615 aaPredicted RBP25.61■■□□□ 1.69
GPHN-211ENST00000556020 CADPS2Q86UW7 1296 aa25.61■■□□□ 1.69
GPHN-211ENST00000556020 CCDC144AA2RUR9 1427 aa25.6■■□□□ 1.69
GPHN-211ENST00000556020 SETD5Q9C0A6 1442 aa25.59■■□□□ 1.69
GPHN-211ENST00000556020 RPGRIP1LQ68CZ1 1315 aa25.58■■□□□ 1.69
GPHN-211ENST00000556020 SETD1AO15047 1707 aaKnown RBP25.57■■□□□ 1.68
GPHN-211ENST00000556020 RGL3Q3MIN7 710 aa25.56■■□□□ 1.68
GPHN-211ENST00000556020 NALCNQ8IZF0 1738 aa25.52■■□□□ 1.68
GPHN-211ENST00000556020 COL16A1Q07092 1604 aaPredicted RBP25.52■■□□□ 1.68
GPHN-211ENST00000556020 RAB3GAP2Q9H2M9 1393 aa25.51■■□□□ 1.67
GPHN-211ENST00000556020 DCCP43146 1447 aa25.51■■□□□ 1.67
GPHN-211ENST00000556020 SPATA31E1Q6ZUB1 1445 aa25.49■■□□□ 1.67
GPHN-211ENST00000556020 ADGRL3Q9HAR2 1447 aa25.49■■□□□ 1.67
GPHN-211ENST00000556020 JCADQ9P266 1359 aa25.48■■□□□ 1.67
GPHN-211ENST00000556020 IFT172Q9UG01 1749 aa25.48■■□□□ 1.67
GPHN-211ENST00000556020 ADGRF5Q8IZF2 1346 aa25.47■■□□□ 1.67
GPHN-211ENST00000556020 ACIN1Q9UKV3 1341 aaKnown RBP25.47■■□□□ 1.67
GPHN-211ENST00000556020 BRINP3Q76B58 766 aa25.47■■□□□ 1.67
GPHN-211ENST00000556020 AHDC1Q5TGY3 1603 aaPredicted RBP25.47■■□□□ 1.67
GPHN-211ENST00000556020 MST1RQ04912 1400 aa25.46■■□□□ 1.67
GPHN-211ENST00000556020 ROBO2Q9HCK4 1378 aa25.45■■□□□ 1.67
GPHN-211ENST00000556020 RGS17Q9UGC6 210 aaPredicted RBP25.45■■□□□ 1.66
GPHN-211ENST00000556020 PTCH1Q13635 1447 aa25.45■■□□□ 1.66
GPHN-211ENST00000556020 ASXL1Q8IXJ9 1541 aa25.44■■□□□ 1.66
GPHN-211ENST00000556020 ANKRD30BQ9BXX2 1392 aa25.42■■□□□ 1.66
GPHN-211ENST00000556020 STK26Q9P289 416 aa25.39■■□□□ 1.66
GPHN-211ENST00000556020 NHSL1Q5SYE7 1610 aa25.38■■□□□ 1.65
GPHN-211ENST00000556020 SHPRHQ149N8 1683 aa25.38■■□□□ 1.65
GPHN-211ENST00000556020 DDX17Q92841 729 aaKnown RBP25.36■■□□□ 1.65
GPHN-211ENST00000556020 PRAG1Q86YV5 1406 aa25.36■■□□□ 1.65
GPHN-211ENST00000556020 LRP6O75581 1613 aa25.35■■□□□ 1.65
GPHN-211ENST00000556020 MEX3CQ5U5Q3 659 aaKnown RBP25.35■■□□□ 1.65
GPHN-211ENST00000556020 TMEM132EQ6IEE7 984 aa25.35■■□□□ 1.65
GPHN-211ENST00000556020 PIK3C2GO75747 1445 aa25.35■■□□□ 1.65
GPHN-211ENST00000556020 C1orf167Q5SNV9 1468 aa25.34■■□□□ 1.65
GPHN-211ENST00000556020 SPATA31A6Q5VVP1 1343 aa25.34■■□□□ 1.65
GPHN-211ENST00000556020 POTEAQ6S8J7 498 aa25.33■■□□□ 1.65
GPHN-211ENST00000556020 NUTM2BA6NNL0 878 aaPredicted RBP25.31■■□□□ 1.64
GPHN-211ENST00000556020 NUTM2EB1AL46 878 aaPredicted RBP25.31■■□□□ 1.64
GPHN-211ENST00000556020 NUTM2AQ8IVF1 878 aaPredicted RBP25.31■■□□□ 1.64
GPHN-211ENST00000556020 WAPLQ7Z5K2 1190 aa25.3■■□□□ 1.64
GPHN-211ENST00000556020 LRPPRCP42704 1394 aaKnown RBP25.3■■□□□ 1.64
GPHN-211ENST00000556020 KNDC1Q76NI1 1749 aa25.29■■□□□ 1.64
GPHN-211ENST00000556020 ORAI2Q96SN7 254 aa25.29■■□□□ 1.64
GPHN-211ENST00000556020 LRRC59Q96AG4 307 aaKnown RBP25.27■■□□□ 1.64
GPHN-211ENST00000556020 TECPR2O15040 1411 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms