RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 FGD6Q6ZV73 1430 aa29.82■■■□□ 2.36
SUPT16H-203ENST00000555752 MSH6P52701 1360 aa29.81■■■□□ 2.36
SUPT16H-203ENST00000555752 SLAIN2Q9P270 581 aa29.81■■■□□ 2.36
SUPT16H-203ENST00000555752 MYO5BQ9ULV0 1848 aa29.78■■■□□ 2.36
SUPT16H-203ENST00000555752 ZFYVE9O95405 1425 aa29.75■■■□□ 2.35
SUPT16H-203ENST00000555752 SLC52A1Q9NWF4 448 aa29.75■■■□□ 2.35
SUPT16H-203ENST00000555752 CHD2O14647 1828 aaKnown RBP29.74■■■□□ 2.35
SUPT16H-203ENST00000555752 JCADQ9P266 1359 aa29.74■■■□□ 2.35
SUPT16H-203ENST00000555752 GCC2Q8IWJ2 1684 aa29.72■■■□□ 2.35
SUPT16H-203ENST00000555752 COL16A1Q07092 1604 aaPredicted RBP29.71■■■□□ 2.35
SUPT16H-203ENST00000555752 APLP2Q06481 763 aa29.71■■■□□ 2.35
SUPT16H-203ENST00000555752 PLEKHG1Q9ULL1 1385 aa29.71■■■□□ 2.35
SUPT16H-203ENST00000555752 RIMS2Q9UQ26 1411 aa29.7■■■□□ 2.34
SUPT16H-203ENST00000555752 LRP6O75581 1613 aa29.68■■■□□ 2.34
SUPT16H-203ENST00000555752 PPP1R15AO75807 674 aaPredicted RBP29.68■■■□□ 2.34
SUPT16H-203ENST00000555752 ADGRL2O95490 1459 aa29.68■■■□□ 2.34
SUPT16H-203ENST00000555752 TMEM131LA2VDJ0 1609 aa29.67■■■□□ 2.34
SUPT16H-203ENST00000555752 RPRD2Q5VT52 1461 aaKnown RBP29.67■■■□□ 2.34
SUPT16H-203ENST00000555752 NUTM2DQ5VT03 806 aaPredicted RBP29.64■■■□□ 2.34
SUPT16H-203ENST00000555752 ANKRD50Q9ULJ7 1429 aa29.62■■■□□ 2.33
SUPT16H-203ENST00000555752 C14orf37Q86TY3 774 aa29.61■■■□□ 2.33
SUPT16H-203ENST00000555752 TBX22Q9Y458 520 aa29.61■■■□□ 2.33
SUPT16H-203ENST00000555752 CHGAP10645 457 aaKnown RBP29.6■■■□□ 2.33
SUPT16H-203ENST00000555752 FAM50AQ14320 339 aaKnown RBP29.6■■■□□ 2.33
SUPT16H-203ENST00000555752 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.59■■■□□ 2.33
SUPT16H-203ENST00000555752 ADAMTS13Q76LX8 1427 aa29.59■■■□□ 2.33
SUPT16H-203ENST00000555752 MEX3CQ5U5Q3 659 aaKnown RBP29.58■■■□□ 2.33
SUPT16H-203ENST00000555752 SPATA31A6Q5VVP1 1343 aa29.57■■■□□ 2.32
SUPT16H-203ENST00000555752 HDGFP51858 240 aaKnown RBP29.57■■■□□ 2.32
SUPT16H-203ENST00000555752 NCOA3Q9Y6Q9 1424 aa29.56■■■□□ 2.32
SUPT16H-203ENST00000555752 TRIM52Q96A61 297 aa29.56■■■□□ 2.32
SUPT16H-203ENST00000555752 AHDC1Q5TGY3 1603 aaPredicted RBP29.55■■■□□ 2.32
SUPT16H-203ENST00000555752 UPF1Q92900 1129 aaKnown RBP eCLIP29.53■■■□□ 2.32
SUPT16H-203ENST00000555752 SHPRHQ149N8 1683 aa29.53■■■□□ 2.32
SUPT16H-203ENST00000555752 CADPS2Q86UW7 1296 aa29.52■■■□□ 2.32
SUPT16H-203ENST00000555752 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.52■■■□□ 2.32
SUPT16H-203ENST00000555752 E9PCH4 1651 aa29.52■■■□□ 2.32
SUPT16H-203ENST00000555752 ATF3P18847 181 aa29.51■■■□□ 2.31
SUPT16H-203ENST00000555752 ZNF772Q68DY9 489 aaPredicted RBP29.51■■■□□ 2.31
SUPT16H-203ENST00000555752 C19orf44Q9H6X5 657 aa29.51■■■□□ 2.31
SUPT16H-203ENST00000555752 UNC13BO14795 1591 aa29.51■■■□□ 2.31
SUPT16H-203ENST00000555752 DIP2AQ14689 1571 aa29.49■■■□□ 2.31
SUPT16H-203ENST00000555752 PTPRUQ92729 1446 aa29.48■■■□□ 2.31
SUPT16H-203ENST00000555752 NUTM2BA6NNL0 878 aaPredicted RBP29.47■■■□□ 2.31
SUPT16H-203ENST00000555752 NUTM2EB1AL46 878 aaPredicted RBP29.47■■■□□ 2.31
SUPT16H-203ENST00000555752 BRINP3Q76B58 766 aa29.47■■■□□ 2.31
SUPT16H-203ENST00000555752 NUTM2AQ8IVF1 878 aaPredicted RBP29.47■■■□□ 2.31
SUPT16H-203ENST00000555752 AMOTL2Q9Y2J4 779 aa29.46■■■□□ 2.31
SUPT16H-203ENST00000555752 PIK3R4Q99570 1358 aa29.45■■■□□ 2.31
SUPT16H-203ENST00000555752 TRPM2O94759 1503 aa29.43■■■□□ 2.3
SUPT16H-203ENST00000555752 RXRBP28702 533 aa29.42■■■□□ 2.3
SUPT16H-203ENST00000555752 IQGAP3Q86VI3 1631 aa29.38■■■□□ 2.29
SUPT16H-203ENST00000555752 ASXL1Q8IXJ9 1541 aa29.38■■■□□ 2.29
SUPT16H-203ENST00000555752 AFF2P51816 1311 aa29.37■■■□□ 2.29
SUPT16H-203ENST00000555752 NRXN3Q9Y4C0 1643 aa29.36■■■□□ 2.29
SUPT16H-203ENST00000555752 XRN1Q8IZH2 1706 aaKnown RBP29.34■■■□□ 2.29
SUPT16H-203ENST00000555752 MST1RQ04912 1400 aa29.34■■■□□ 2.29
SUPT16H-203ENST00000555752 DCCP43146 1447 aa29.32■■■□□ 2.28
SUPT16H-203ENST00000555752 DDX17Q92841 729 aaKnown RBP29.32■■■□□ 2.28
SUPT16H-203ENST00000555752 NHSL1Q5SYE7 1610 aa29.31■■■□□ 2.28
SUPT16H-203ENST00000555752 CDK12Q9NYV4 1490 aaPredicted RBP29.31■■■□□ 2.28
SUPT16H-203ENST00000555752 SETD5Q9C0A6 1442 aa29.31■■■□□ 2.28
SUPT16H-203ENST00000555752 NUP155O75694 1391 aa29.31■■■□□ 2.28
SUPT16H-203ENST00000555752 METP08581 1390 aa29.28■■■□□ 2.28
SUPT16H-203ENST00000555752 ROCK1Q13464 1354 aa29.28■■■□□ 2.28
SUPT16H-203ENST00000555752 SETBP1Q9Y6X0 1596 aa29.28■■■□□ 2.28
SUPT16H-203ENST00000555752 C8orf37Q96NL8 207 aa29.26■■■□□ 2.27
SUPT16H-203ENST00000555752 RGS12O14924 1447 aa29.25■■■□□ 2.27
SUPT16H-203ENST00000555752 LRRC59Q96AG4 307 aaKnown RBP29.24■■■□□ 2.27
SUPT16H-203ENST00000555752 PNPLA6Q8IY17 1366 aa29.23■■■□□ 2.27
SUPT16H-203ENST00000555752 ITGAEP38570 1179 aa29.22■■■□□ 2.27
SUPT16H-203ENST00000555752 ZNF326Q5BKZ1 582 aaKnown RBP29.22■■■□□ 2.27
SUPT16H-203ENST00000555752 NALCNQ8IZF0 1738 aa29.22■■■□□ 2.27
SUPT16H-203ENST00000555752 SPHKAPQ2M3C7 1700 aa29.21■■■□□ 2.27
SUPT16H-203ENST00000555752 QTRT2Q9H974 415 aaKnown RBP29.21■■■□□ 2.27
SUPT16H-203ENST00000555752 ADGRL3Q9HAR2 1447 aa29.2■■■□□ 2.26
SUPT16H-203ENST00000555752 RBM6P78332 1123 aaKnown RBP29.17■■■□□ 2.26
SUPT16H-203ENST00000555752 ADAMTS2O95450 1211 aa29.15■■■□□ 2.26
SUPT16H-203ENST00000555752 NEXMIFQ5QGS0 1516 aa29.13■■■□□ 2.25
SUPT16H-203ENST00000555752 NGLY1Q96IV0 654 aa29.12■■■□□ 2.25
SUPT16H-203ENST00000555752 CLTCL1P53675 1640 aa29.12■■■□□ 2.25
SUPT16H-203ENST00000555752 C1orf167Q5SNV9 1468 aa29.11■■■□□ 2.25
SUPT16H-203ENST00000555752 SRCAPQ6ZRS2 3230 aa29.07■■■□□ 2.24
SUPT16H-203ENST00000555752 ORAI2Q96SN7 254 aa29.07■■■□□ 2.24
SUPT16H-203ENST00000555752 LAMC1P11047 1609 aa29.05■■■□□ 2.24
SUPT16H-203ENST00000555752 PPARGC1BQ86YN6 1023 aaKnown RBP29.04■■■□□ 2.24
SUPT16H-203ENST00000555752 ROBO2Q9HCK4 1378 aa29.03■■■□□ 2.24
SUPT16H-203ENST00000555752 SOS2Q07890 1332 aaPredicted RBP29.02■■■□□ 2.24
SUPT16H-203ENST00000555752 USP21Q9UK80 565 aa29.02■■■□□ 2.24
SUPT16H-203ENST00000555752 ATAD2Q6PL18 1390 aa29■■■□□ 2.23
SUPT16H-203ENST00000555752 KIF1BO60333 1816 aa28.99■■■□□ 2.23
SUPT16H-203ENST00000555752 PTCH1Q13635 1447 aa28.99■■■□□ 2.23
SUPT16H-203ENST00000555752 TRPC5Q9UL62 973 aaPredicted RBP28.96■■■□□ 2.23
SUPT16H-203ENST00000555752 FNBP4Q8N3X1 1017 aaPredicted RBP28.95■■■□□ 2.22
SUPT16H-203ENST00000555752 ATRNO75882 1429 aa28.94■■■□□ 2.22
SUPT16H-203ENST00000555752 COL22A1Q8NFW1 1626 aaPredicted RBP28.93■■■□□ 2.22
SUPT16H-203ENST00000555752 EP400Q96L91 3159 aa28.89■■■□□ 2.22
SUPT16H-203ENST00000555752 VGFO15240 615 aaPredicted RBP28.89■■■□□ 2.22
SUPT16H-203ENST00000555752 MYOM2P54296 1465 aa28.88■■■□□ 2.21
SUPT16H-203ENST00000555752 PRAG1Q86YV5 1406 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms