RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 TRIM67Q6ZTA4 783 aa13.7□□□□□ -0.22
VRK1-205ENST00000555402 EMID1Q96A84 441 aaPredicted RBP13.7□□□□□ -0.22
VRK1-205ENST00000555402 DNAJB2P25686 324 aa13.69□□□□□ -0.22
VRK1-205ENST00000555402 PTGDRQ13258 359 aa13.68□□□□□ -0.22
VRK1-205ENST00000555402 RBM46Q8TBY0 533 aaKnown RBP13.66□□□□□ -0.22
VRK1-205ENST00000555402 ARHGEF1Q92888 912 aaKnown RBP13.66□□□□□ -0.22
VRK1-205ENST00000555402 TMEM134Q9H6X4 195 aa13.66□□□□□ -0.22
VRK1-205ENST00000555402 TLL1O43897 1013 aa13.65□□□□□ -0.22
VRK1-205ENST00000555402 SPRYD7Q5W111 196 aa13.64□□□□□ -0.23
VRK1-205ENST00000555402 ZNF775Q96BV0 537 aaPredicted RBP13.64□□□□□ -0.23
VRK1-205ENST00000555402 ADGRG1Q9Y653 693 aa13.64□□□□□ -0.23
VRK1-205ENST00000555402 ACTN4O43707 911 aaKnown RBP13.63□□□□□ -0.23
VRK1-205ENST00000555402 ZNF598Q86UK7 904 aaKnown RBP13.63□□□□□ -0.23
VRK1-205ENST00000555402 ANKLE1Q8NAG6 615 aa13.63□□□□□ -0.23
VRK1-205ENST00000555402 PPEF1O14829 653 aaPredicted RBP13.62□□□□□ -0.23
VRK1-205ENST00000555402 KMT5BQ4FZB7 885 aa13.62□□□□□ -0.23
VRK1-205ENST00000555402 PKDCCQ504Y2 493 aa13.61□□□□□ -0.23
VRK1-205ENST00000555402 RCCD1A6NED2 376 aa13.6□□□□□ -0.23
VRK1-205ENST00000555402 S1PR4O95977 384 aa13.6□□□□□ -0.23
VRK1-205ENST00000555402 PRR20EP86478 221 aa13.6□□□□□ -0.23
VRK1-205ENST00000555402 PRR20CP86479 221 aa13.6□□□□□ -0.23
VRK1-205ENST00000555402 PRR20DP86480 221 aa13.6□□□□□ -0.23
VRK1-205ENST00000555402 PRR20BP86481 221 aa13.6□□□□□ -0.23
VRK1-205ENST00000555402 PRR20AP86496 221 aa13.6□□□□□ -0.23
VRK1-205ENST00000555402 DGAT1O75907 488 aa13.59□□□□□ -0.23
VRK1-205ENST00000555402 MYT1Q01538 1121 aa13.59□□□□□ -0.23
VRK1-205ENST00000555402 LIAT1Q6ZQX7 453 aa13.59□□□□□ -0.23
VRK1-205ENST00000555402 CFHP08603 1231 aa13.58□□□□□ -0.24
VRK1-205ENST00000555402 FAM161AQ3B820 660 aa13.58□□□□□ -0.24
VRK1-205ENST00000555402 KCNV2Q8TDN2 545 aa13.56□□□□□ -0.24
VRK1-205ENST00000555402 NUTM2FA1L443 756 aa13.55□□□□□ -0.24
VRK1-205ENST00000555402 ADH1BP00325 375 aa13.55□□□□□ -0.24
VRK1-205ENST00000555402 ZNF697Q5TEC3 545 aa13.55□□□□□ -0.24
VRK1-205ENST00000555402 SLC10A3P09131 477 aa13.54□□□□□ -0.24
VRK1-205ENST00000555402 NR1I2O75469 434 aa13.53□□□□□ -0.24
VRK1-205ENST00000555402 GDF9O60383 454 aa13.52□□□□□ -0.25
VRK1-205ENST00000555402 TSHZ2Q9NRE2 1034 aa13.51□□□□□ -0.25
VRK1-205ENST00000555402 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.5□□□□□ -0.25
VRK1-205ENST00000555402 POTECB2RU33 542 aa13.5□□□□□ -0.25
VRK1-205ENST00000555402 TNFRSF10AO00220 468 aa13.49□□□□□ -0.25
VRK1-205ENST00000555402 SLC6A16Q9GZN6 736 aa13.49□□□□□ -0.25
VRK1-205ENST00000555402 FAM187AA6NFU0 413 aa13.48□□□□□ -0.25
VRK1-205ENST00000555402 FCHSD2O94868 740 aa13.48□□□□□ -0.25
VRK1-205ENST00000555402 PLA2G2CQ5R387 149 aa13.48□□□□□ -0.25
VRK1-205ENST00000555402 SCUBE3Q8IX30 993 aa13.48□□□□□ -0.25
VRK1-205ENST00000555402 PXYLP1Q8TE99 480 aa13.45□□□□□ -0.26
VRK1-205ENST00000555402 OATP04181 439 aa13.44□□□□□ -0.26
VRK1-205ENST00000555402 PUS10Q3MIT2 529 aaKnown RBP13.42□□□□□ -0.26
VRK1-205ENST00000555402 SPSB2Q99619 263 aa13.41□□□□□ -0.26
VRK1-205ENST00000555402 RSPH4AQ5TD94 716 aa13.4□□□□□ -0.26
VRK1-205ENST00000555402 AAASQ9NRG9 546 aa13.4□□□□□ -0.26
VRK1-205ENST00000555402 SEMA3EO15041 775 aa13.38□□□□□ -0.27
VRK1-205ENST00000555402 ST8SIA5O15466 376 aa13.38□□□□□ -0.27
VRK1-205ENST00000555402 PKD2L1Q9P0L9 805 aa13.38□□□□□ -0.27
VRK1-205ENST00000555402 FOXC1Q12948 553 aa13.37□□□□□ -0.27
VRK1-205ENST00000555402 METTL3Q86U44 580 aaKnown RBP13.37□□□□□ -0.27
VRK1-205ENST00000555402 LMOD2Q6P5Q4 547 aa13.36□□□□□ -0.27
VRK1-205ENST00000555402 HIC1Q14526 733 aa13.34□□□□□ -0.27
VRK1-205ENST00000555402 P3H3Q8IVL6 736 aa13.34□□□□□ -0.27
VRK1-205ENST00000555402 RPIAP49247 311 aa13.33□□□□□ -0.28
VRK1-205ENST00000555402 SLC24A1O60721 1099 aa13.32□□□□□ -0.28
VRK1-205ENST00000555402 MORN1Q5T089 497 aa13.31□□□□□ -0.28
VRK1-205ENST00000555402 TREML4Q6UXN2 200 aa13.31□□□□□ -0.28
VRK1-205ENST00000555402 DAXXQ9UER7 740 aaPredicted RBP13.31□□□□□ -0.28
VRK1-205ENST00000555402 CD2BP2O95400 341 aaKnown RBP13.29□□□□□ -0.28
VRK1-205ENST00000555402 CRIPAKQ8N1N5 446 aa13.29□□□□□ -0.28
VRK1-205ENST00000555402 RDH13Q8NBN7 331 aa13.29□□□□□ -0.28
VRK1-205ENST00000555402 THAP11Q96EK4 314 aa13.29□□□□□ -0.28
VRK1-205ENST00000555402 FCF1Q9Y324 198 aaKnown RBP13.29□□□□□ -0.28
VRK1-205ENST00000555402 FUT2Q10981 343 aa13.28□□□□□ -0.28
VRK1-205ENST00000555402 LCE2AQ5TA79 106 aaPredicted RBP13.28□□□□□ -0.28
VRK1-205ENST00000555402 TOR4AQ9NXH8 423 aa13.28□□□□□ -0.28
VRK1-205ENST00000555402 FECHP22830 423 aa13.27□□□□□ -0.29
VRK1-205ENST00000555402 RBM26Q5T8P6 1007 aaKnown RBP13.27□□□□□ -0.29
VRK1-205ENST00000555402 FAM160A2Q8N612 972 aaPredicted RBP13.27□□□□□ -0.29
VRK1-205ENST00000555402 DACH1Q9UI36 760 aa13.27□□□□□ -0.29
VRK1-205ENST00000555402 AVPP01185 164 aa13.26□□□□□ -0.29
VRK1-205ENST00000555402 ATP6V1AP38606 617 aa13.26□□□□□ -0.29
VRK1-205ENST00000555402 DDX11L8A8MPP1 907 aa13.25□□□□□ -0.29
VRK1-205ENST00000555402 FMNL1O95466 1100 aaPredicted RBP13.25□□□□□ -0.29
VRK1-205ENST00000555402 GNPATO15228 680 aa13.24□□□□□ -0.29
VRK1-205ENST00000555402 CYP4X1Q8N118 509 aa13.24□□□□□ -0.29
VRK1-205ENST00000555402 SLC27A5Q9Y2P5 690 aa13.24□□□□□ -0.29
VRK1-205ENST00000555402 GCGRP47871 477 aa13.22□□□□□ -0.29
VRK1-205ENST00000555402 SALL2Q9Y467 1007 aaPredicted RBP13.22□□□□□ -0.29
VRK1-205ENST00000555402 TESPA1A2RU30 521 aaPredicted RBP13.21□□□□□ -0.29
VRK1-205ENST00000555402 AXIN1O15169 862 aa13.21□□□□□ -0.29
VRK1-205ENST00000555402 NLRP7Q8WX94 980 aa13.21□□□□□ -0.29
VRK1-205ENST00000555402 SMYD5Q6GMV2 418 aa13.2□□□□□ -0.3
VRK1-205ENST00000555402 BRICD5Q6PL45 260 aa13.2□□□□□ -0.3
VRK1-205ENST00000555402 CTC1Q2NKJ3 1217 aa13.19□□□□□ -0.3
VRK1-205ENST00000555402 PRDM9Q9NQV7 894 aa13.19□□□□□ -0.3
VRK1-205ENST00000555402 GMPR2Q9P2T1 348 aaKnown RBP13.19□□□□□ -0.3
VRK1-205ENST00000555402 SULF1Q8IWU6 871 aa13.18□□□□□ -0.3
VRK1-205ENST00000555402 C11orf95C9JLR9 678 aaPredicted RBP13.17□□□□□ -0.3
VRK1-205ENST00000555402 GPR37O15354 613 aa13.17□□□□□ -0.3
VRK1-205ENST00000555402 ZBTB24O43167 697 aaPredicted RBP13.17□□□□□ -0.3
VRK1-205ENST00000555402 SMCPP49901 116 aaPredicted RBP13.17□□□□□ -0.3
VRK1-205ENST00000555402 PHOX2BQ99453 314 aa13.15□□□□□ -0.3
VRK1-205ENST00000555402 TTC24A2A3L6 582 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms