RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 TMEM134Q9H6X4 195 aa12.74□□□□□ -0.37
SEC23A-209ENST00000555363 OATP04181 439 aa12.73□□□□□ -0.37
SEC23A-209ENST00000555363 KDM2AQ9Y2K7 1162 aa12.72□□□□□ -0.37
SEC23A-209ENST00000555363 PCDHB3Q9Y5E6 796 aa12.72□□□□□ -0.37
SEC23A-209ENST00000555363 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.71□□□□□ -0.37
SEC23A-209ENST00000555363 KMT5BQ4FZB7 885 aa12.71□□□□□ -0.37
SEC23A-209ENST00000555363 GNPATO15228 680 aa12.69□□□□□ -0.38
SEC23A-209ENST00000555363 GGCXP38435 758 aa12.68□□□□□ -0.38
SEC23A-209ENST00000555363 PPP1R18Q6NYC8 613 aa12.68□□□□□ -0.38
SEC23A-209ENST00000555363 TULP1O00294 542 aaPredicted RBP12.67□□□□□ -0.38
SEC23A-209ENST00000555363 RSPH4AQ5TD94 716 aa12.67□□□□□ -0.38
SEC23A-209ENST00000555363 VSIG10Q8N0Z9 540 aa12.67□□□□□ -0.38
SEC23A-209ENST00000555363 PXYLP1Q8TE99 480 aa12.67□□□□□ -0.38
SEC23A-209ENST00000555363 CFHP08603 1231 aa12.66□□□□□ -0.38
SEC23A-209ENST00000555363 GPIHBP1Q8IV16 184 aa12.66□□□□□ -0.38
SEC23A-209ENST00000555363 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.66□□□□□ -0.38
SEC23A-209ENST00000555363 NKX2-3Q8TAU0 364 aa12.65□□□□□ -0.38
SEC23A-209ENST00000555363 ZPR1O75312 459 aa12.64□□□□□ -0.39
SEC23A-209ENST00000555363 BLOC1S3Q6QNY0 202 aa12.64□□□□□ -0.39
SEC23A-209ENST00000555363 METTL3Q86U44 580 aaKnown RBP12.63□□□□□ -0.39
SEC23A-209ENST00000555363 PRKD2Q9BZL6 878 aa12.63□□□□□ -0.39
SEC23A-209ENST00000555363 FECHP22830 423 aa12.62□□□□□ -0.39
SEC23A-209ENST00000555363 ACTN4O43707 911 aaKnown RBP12.61□□□□□ -0.39
SEC23A-209ENST00000555363 SLC10A3P09131 477 aa12.59□□□□□ -0.39
SEC23A-209ENST00000555363 RDH13Q8NBN7 331 aa12.58□□□□□ -0.4
SEC23A-209ENST00000555363 GPR37O15354 613 aa12.57□□□□□ -0.4
SEC23A-209ENST00000555363 Q6ZNB5 142 aa12.57□□□□□ -0.4
SEC23A-209ENST00000555363 NR1I2O75469 434 aa12.55□□□□□ -0.4
SEC23A-209ENST00000555363 TMUB1Q9BVT8 246 aa12.55□□□□□ -0.4
SEC23A-209ENST00000555363 DAXXQ9UER7 740 aaPredicted RBP12.55□□□□□ -0.4
SEC23A-209ENST00000555363 DDX11L8A8MPP1 907 aa12.54□□□□□ -0.4
SEC23A-209ENST00000555363 TLL1O43897 1013 aa12.54□□□□□ -0.4
SEC23A-209ENST00000555363 V9GY48 417 aaPredicted RBP12.54□□□□□ -0.4
SEC23A-209ENST00000555363 GFRA3O60609 400 aa12.53□□□□□ -0.4
SEC23A-209ENST00000555363 LAPTM4AQ15012 233 aa12.53□□□□□ -0.4
SEC23A-209ENST00000555363 NLRP7Q8WX94 980 aa12.53□□□□□ -0.4
SEC23A-209ENST00000555363 PUS10Q3MIT2 529 aaKnown RBP12.5□□□□□ -0.41
SEC23A-209ENST00000555363 SULF1Q8IWU6 871 aa12.5□□□□□ -0.41
SEC23A-209ENST00000555363 RNF223E7ERA6 249 aa12.47□□□□□ -0.41
SEC23A-209ENST00000555363 S1PR4O95977 384 aa12.47□□□□□ -0.41
SEC23A-209ENST00000555363 ADH1BP00325 375 aa12.47□□□□□ -0.41
SEC23A-209ENST00000555363 SCUBE3Q8IX30 993 aa12.46□□□□□ -0.41
SEC23A-209ENST00000555363 SLC6A16Q9GZN6 736 aa12.45□□□□□ -0.42
SEC23A-209ENST00000555363 PPEF1O14829 653 aaPredicted RBP12.44□□□□□ -0.42
SEC23A-209ENST00000555363 MAP2K5Q13163 448 aa12.44□□□□□ -0.42
SEC23A-209ENST00000555363 PHOX2BQ99453 314 aa12.44□□□□□ -0.42
SEC23A-209ENST00000555363 SLC19A1P41440 591 aa12.43□□□□□ -0.42
SEC23A-209ENST00000555363 ANKLE1Q8NAG6 615 aa12.43□□□□□ -0.42
SEC23A-209ENST00000555363 FUT2Q10981 343 aa12.42□□□□□ -0.42
SEC23A-209ENST00000555363 SPSB2Q99619 263 aa12.42□□□□□ -0.42
SEC23A-209ENST00000555363 PDZRN3Q9UPQ7 1066 aa12.42□□□□□ -0.42
SEC23A-209ENST00000555363 NRG2O14511 850 aaPredicted RBP12.41□□□□□ -0.42
SEC23A-209ENST00000555363 ATP6V1AP38606 617 aa12.41□□□□□ -0.42
SEC23A-209ENST00000555363 GCGRP47871 477 aa12.41□□□□□ -0.42
SEC23A-209ENST00000555363 GRIPAP1Q4V328 841 aa12.39□□□□□ -0.43
SEC23A-209ENST00000555363 IRF6O14896 467 aa12.38□□□□□ -0.43
SEC23A-209ENST00000555363 MORN1Q5T089 497 aa12.38□□□□□ -0.43
SEC23A-209ENST00000555363 MINK1Q8N4C8 1332 aaPredicted RBP12.37□□□□□ -0.43
SEC23A-209ENST00000555363 FMNL1O95466 1100 aaPredicted RBP12.36□□□□□ -0.43
SEC23A-209ENST00000555363 MDM2Q00987 491 aaPredicted RBP12.36□□□□□ -0.43
SEC23A-209ENST00000555363 KRI1Q8N9T8 703 aaKnown RBP12.36□□□□□ -0.43
SEC23A-209ENST00000555363 TRAF7Q6Q0C0 670 aa12.35□□□□□ -0.43
SEC23A-209ENST00000555363 SLC27A5Q9Y2P5 690 aa12.34□□□□□ -0.43
SEC23A-209ENST00000555363 SPRYD7Q5W111 196 aa12.33□□□□□ -0.44
SEC23A-209ENST00000555363 CCDC102AQ96A19 550 aa12.33□□□□□ -0.44
SEC23A-209ENST00000555363 ZNF598Q86UK7 904 aaKnown RBP12.32□□□□□ -0.44
SEC23A-209ENST00000555363 ZNF697Q5TEC3 545 aa12.31□□□□□ -0.44
SEC23A-209ENST00000555363 LIAT1Q6ZQX7 453 aa12.31□□□□□ -0.44
SEC23A-209ENST00000555363 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.31□□□□□ -0.44
SEC23A-209ENST00000555363 CD46P15529 392 aa12.3□□□□□ -0.44
SEC23A-209ENST00000555363 LMOD2Q6P5Q4 547 aa12.3□□□□□ -0.44
SEC23A-209ENST00000555363 KDM4AO75164 1064 aa12.28□□□□□ -0.44
SEC23A-209ENST00000555363 Q3C1V9 767 aa12.28□□□□□ -0.44
SEC23A-209ENST00000555363 EMID1Q96A84 441 aaPredicted RBP12.28□□□□□ -0.44
SEC23A-209ENST00000555363 CLCN1P35523 988 aa12.27□□□□□ -0.45
SEC23A-209ENST00000555363 THAP11Q96EK4 314 aa12.27□□□□□ -0.45
SEC23A-209ENST00000555363 GPCPD1Q9NPB8 672 aa12.27□□□□□ -0.45
SEC23A-209ENST00000555363 FCF1Q9Y324 198 aaKnown RBP12.27□□□□□ -0.45
SEC23A-209ENST00000555363 SALL2Q9Y467 1007 aaPredicted RBP12.26□□□□□ -0.45
SEC23A-209ENST00000555363 PKDCCQ504Y2 493 aa12.25□□□□□ -0.45
SEC23A-209ENST00000555363 PLA2G2CQ5R387 149 aa12.25□□□□□ -0.45
SEC23A-209ENST00000555363 BRICD5Q6PL45 260 aa12.25□□□□□ -0.45
SEC23A-209ENST00000555363 RNF19BQ6ZMZ0 732 aa12.24□□□□□ -0.45
SEC23A-209ENST00000555363 FAM160A2Q8N612 972 aaPredicted RBP12.24□□□□□ -0.45
SEC23A-209ENST00000555363 TNFRSF10AO00220 468 aa12.23□□□□□ -0.45
SEC23A-209ENST00000555363 USP46P62068 366 aa12.23□□□□□ -0.45
SEC23A-209ENST00000555363 TRIM67Q6ZTA4 783 aa12.23□□□□□ -0.45
SEC23A-209ENST00000555363 PRDM9Q9NQV7 894 aa12.23□□□□□ -0.45
SEC23A-209ENST00000555363 ZBTB24O43167 697 aaPredicted RBP12.22□□□□□ -0.45
SEC23A-209ENST00000555363 CD2BP2O95400 341 aaKnown RBP12.21□□□□□ -0.45
SEC23A-209ENST00000555363 FOXC1Q12948 553 aa12.21□□□□□ -0.45
SEC23A-209ENST00000555363 MSS51Q4VC12 460 aa12.21□□□□□ -0.45
SEC23A-209ENST00000555363 NUTM1Q86Y26 1132 aa12.21□□□□□ -0.45
SEC23A-209ENST00000555363 RPIAP49247 311 aa12.2□□□□□ -0.46
SEC23A-209ENST00000555363 PRR20EP86478 221 aa12.2□□□□□ -0.46
SEC23A-209ENST00000555363 PRR20CP86479 221 aa12.2□□□□□ -0.46
SEC23A-209ENST00000555363 PRR20DP86480 221 aa12.2□□□□□ -0.46
SEC23A-209ENST00000555363 PRR20BP86481 221 aa12.2□□□□□ -0.46
SEC23A-209ENST00000555363 PRR20AP86496 221 aa12.2□□□□□ -0.46
SEC23A-209ENST00000555363 FAM187AA6NFU0 413 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms