RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 CHD2O14647 1828 aaKnown RBP13.76□□□□□ -0.21
AC004828.1-201ENST00000555303 PLEKHG1Q9ULL1 1385 aa13.76□□□□□ -0.21
AC004828.1-201ENST00000555303 HDGFP51858 240 aaKnown RBP13.76□□□□□ -0.21
AC004828.1-201ENST00000555303 MED1Q15648 1581 aaPredicted RBP13.75□□□□□ -0.21
AC004828.1-201ENST00000555303 RIMS2Q9UQ26 1411 aa13.75□□□□□ -0.21
AC004828.1-201ENST00000555303 NUP155O75694 1391 aa13.75□□□□□ -0.21
AC004828.1-201ENST00000555303 HSPA1LP34931 641 aa13.75□□□□□ -0.21
AC004828.1-201ENST00000555303 KCNA6P17658 529 aa13.74□□□□□ -0.21
AC004828.1-201ENST00000555303 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.73□□□□□ -0.21
AC004828.1-201ENST00000555303 TMEM94Q12767 1356 aa13.71□□□□□ -0.21
AC004828.1-201ENST00000555303 PPP1R15AO75807 674 aaPredicted RBP13.71□□□□□ -0.21
AC004828.1-201ENST00000555303 ITGAEP38570 1179 aa13.71□□□□□ -0.21
AC004828.1-201ENST00000555303 ILDR2Q71H61 639 aa13.7□□□□□ -0.22
AC004828.1-201ENST00000555303 SLC26A8Q96RN1 970 aa13.7□□□□□ -0.22
AC004828.1-201ENST00000555303 PIK3R4Q99570 1358 aa13.7□□□□□ -0.22
AC004828.1-201ENST00000555303 TRPM2O94759 1503 aa13.69□□□□□ -0.22
AC004828.1-201ENST00000555303 NAIPQ13075 1403 aa13.69□□□□□ -0.22
AC004828.1-201ENST00000555303 FAM135BQ49AJ0 1406 aa13.69□□□□□ -0.22
AC004828.1-201ENST00000555303 ROBO1Q9Y6N7 1651 aa13.69□□□□□ -0.22
AC004828.1-201ENST00000555303 NCOA3Q9Y6Q9 1424 aa13.68□□□□□ -0.22
AC004828.1-201ENST00000555303 SOCS7O14512 581 aa13.68□□□□□ -0.22
AC004828.1-201ENST00000555303 PPARGC1BQ86YN6 1023 aaKnown RBP13.68□□□□□ -0.22
AC004828.1-201ENST00000555303 BCANQ96GW7 911 aa13.68□□□□□ -0.22
AC004828.1-201ENST00000555303 KIF1BO60333 1816 aa13.67□□□□□ -0.22
AC004828.1-201ENST00000555303 HFM1A2PYH4 1435 aa13.67□□□□□ -0.22
AC004828.1-201ENST00000555303 ADAMTS13Q76LX8 1427 aa13.67□□□□□ -0.22
AC004828.1-201ENST00000555303 PROSER2Q86WR7 435 aaPredicted RBP13.67□□□□□ -0.22
AC004828.1-201ENST00000555303 TBX22Q9Y458 520 aa13.67□□□□□ -0.22
AC004828.1-201ENST00000555303 MSH6P52701 1360 aa13.67□□□□□ -0.22
AC004828.1-201ENST00000555303 SETBP1Q9Y6X0 1596 aa13.66□□□□□ -0.22
AC004828.1-201ENST00000555303 CHGAP10645 457 aaKnown RBP13.66□□□□□ -0.22
AC004828.1-201ENST00000555303 CLTCL1P53675 1640 aa13.65□□□□□ -0.22
AC004828.1-201ENST00000555303 NRXN3Q9Y4C0 1643 aa13.65□□□□□ -0.22
AC004828.1-201ENST00000555303 XRN1Q8IZH2 1706 aaKnown RBP13.64□□□□□ -0.23
AC004828.1-201ENST00000555303 NEXMIFQ5QGS0 1516 aa13.62□□□□□ -0.23
AC004828.1-201ENST00000555303 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.61□□□□□ -0.23
AC004828.1-201ENST00000555303 PHLPP1O60346 1717 aa13.61□□□□□ -0.23
AC004828.1-201ENST00000555303 PHF23Q9BUL5 403 aaPredicted RBP13.6□□□□□ -0.23
AC004828.1-201ENST00000555303 DCCP43146 1447 aa13.59□□□□□ -0.23
AC004828.1-201ENST00000555303 ZNF326Q5BKZ1 582 aaKnown RBP13.57□□□□□ -0.24
AC004828.1-201ENST00000555303 NUTM2DQ5VT03 806 aaPredicted RBP13.57□□□□□ -0.24
AC004828.1-201ENST00000555303 SLAIN2Q9P270 581 aa13.57□□□□□ -0.24
AC004828.1-201ENST00000555303 COL16A1Q07092 1604 aaPredicted RBP13.57□□□□□ -0.24
AC004828.1-201ENST00000555303 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
AC004828.1-201ENST00000555303 PTPRUQ92729 1446 aa13.56□□□□□ -0.24
AC004828.1-201ENST00000555303 SETD1AO15047 1707 aaKnown RBP13.56□□□□□ -0.24
AC004828.1-201ENST00000555303 PPLO60437 1756 aa13.56□□□□□ -0.24
AC004828.1-201ENST00000555303 CADPS2Q86UW7 1296 aa13.56□□□□□ -0.24
AC004828.1-201ENST00000555303 RBM33Q96EV2 1170 aaKnown RBP13.56□□□□□ -0.24
AC004828.1-201ENST00000555303 C19orf44Q9H6X5 657 aa13.56□□□□□ -0.24
AC004828.1-201ENST00000555303 SENP3Q9H4L4 574 aaPredicted RBP13.55□□□□□ -0.24
AC004828.1-201ENST00000555303 C14orf37Q86TY3 774 aa13.54□□□□□ -0.24
AC004828.1-201ENST00000555303 TRIM52Q96A61 297 aa13.54□□□□□ -0.24
AC004828.1-201ENST00000555303 AMOTL2Q9Y2J4 779 aa13.54□□□□□ -0.24
AC004828.1-201ENST00000555303 ACIN1Q9UKV3 1341 aaKnown RBP13.54□□□□□ -0.24
AC004828.1-201ENST00000555303 PRAG1Q86YV5 1406 aa13.54□□□□□ -0.24
AC004828.1-201ENST00000555303 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
AC004828.1-201ENST00000555303 ATF3P18847 181 aa13.53□□□□□ -0.24
AC004828.1-201ENST00000555303 SLC4A1APQ9BWU0 796 aaKnown RBP13.53□□□□□ -0.24
AC004828.1-201ENST00000555303 RPGRIP1LQ68CZ1 1315 aa13.53□□□□□ -0.24
AC004828.1-201ENST00000555303 JCADQ9P266 1359 aa13.53□□□□□ -0.24
AC004828.1-201ENST00000555303 NALCNQ8IZF0 1738 aa13.53□□□□□ -0.24
AC004828.1-201ENST00000555303 PTCH1Q13635 1447 aa13.52□□□□□ -0.25
AC004828.1-201ENST00000555303 IFT172Q9UG01 1749 aa13.51□□□□□ -0.25
AC004828.1-201ENST00000555303 NHSL1Q5SYE7 1610 aa13.51□□□□□ -0.25
AC004828.1-201ENST00000555303 ADGRL3Q9HAR2 1447 aa13.51□□□□□ -0.25
AC004828.1-201ENST00000555303 METP08581 1390 aa13.51□□□□□ -0.25
AC004828.1-201ENST00000555303 VGFO15240 615 aaPredicted RBP13.51□□□□□ -0.25
AC004828.1-201ENST00000555303 ASXL1Q8IXJ9 1541 aa13.49□□□□□ -0.25
AC004828.1-201ENST00000555303 CCDC144AA2RUR9 1427 aa13.49□□□□□ -0.25
AC004828.1-201ENST00000555303 MST1RQ04912 1400 aa13.48□□□□□ -0.25
AC004828.1-201ENST00000555303 SPATA31A6Q5VVP1 1343 aa13.47□□□□□ -0.25
AC004828.1-201ENST00000555303 LAMC1P11047 1609 aa13.46□□□□□ -0.25
AC004828.1-201ENST00000555303 KNDC1Q76NI1 1749 aa13.45□□□□□ -0.26
AC004828.1-201ENST00000555303 BRINP3Q76B58 766 aa13.45□□□□□ -0.26
AC004828.1-201ENST00000555303 RGS17Q9UGC6 210 aaPredicted RBP13.45□□□□□ -0.26
AC004828.1-201ENST00000555303 SPATA31E1Q6ZUB1 1445 aa13.45□□□□□ -0.26
AC004828.1-201ENST00000555303 SETD5Q9C0A6 1442 aa13.44□□□□□ -0.26
AC004828.1-201ENST00000555303 ANKRD30BQ9BXX2 1392 aa13.44□□□□□ -0.26
AC004828.1-201ENST00000555303 CDC42BPGQ6DT37 1551 aa13.43□□□□□ -0.26
AC004828.1-201ENST00000555303 LRP6O75581 1613 aa13.42□□□□□ -0.26
AC004828.1-201ENST00000555303 MPHOSPH9Q99550 1183 aa13.42□□□□□ -0.26
AC004828.1-201ENST00000555303 ROBO2Q9HCK4 1378 aa13.42□□□□□ -0.26
AC004828.1-201ENST00000555303 TECPR2O15040 1411 aa13.41□□□□□ -0.26
AC004828.1-201ENST00000555303 PIK3C2GO75747 1445 aa13.4□□□□□ -0.26
AC004828.1-201ENST00000555303 C1orf167Q5SNV9 1468 aa13.4□□□□□ -0.26
AC004828.1-201ENST00000555303 FOXD1Q16676 465 aa13.39□□□□□ -0.27
AC004828.1-201ENST00000555303 MYOM2P54296 1465 aa13.38□□□□□ -0.27
AC004828.1-201ENST00000555303 NRXN1Q9ULB1 1477 aa13.37□□□□□ -0.27
AC004828.1-201ENST00000555303 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
AC004828.1-201ENST00000555303 POTEAQ6S8J7 498 aa13.37□□□□□ -0.27
AC004828.1-201ENST00000555303 LRRC59Q96AG4 307 aaKnown RBP13.37□□□□□ -0.27
AC004828.1-201ENST00000555303 LRPPRCP42704 1394 aaKnown RBP13.36□□□□□ -0.27
AC004828.1-201ENST00000555303 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
AC004828.1-201ENST00000555303 ADGRF5Q8IZF2 1346 aa13.36□□□□□ -0.27
AC004828.1-201ENST00000555303 ABCC11Q96J66 1382 aa13.35□□□□□ -0.27
AC004828.1-201ENST00000555303 RAB3GAP2Q9H2M9 1393 aa13.35□□□□□ -0.27
AC004828.1-201ENST00000555303 COL22A1Q8NFW1 1626 aaPredicted RBP13.35□□□□□ -0.27
AC004828.1-201ENST00000555303 PNPLA6Q8IY17 1366 aa13.34□□□□□ -0.27
AC004828.1-201ENST00000555303 FMN2Q9NZ56 1722 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms