RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 BCCIPQ9P287 314 aaKnown RBP eCLIP4.1□□□□□ -1.75
SYNE2-212ENST00000554584 PRDM2Q13029 1718 aa4.1□□□□□ -1.75
SYNE2-212ENST00000554584 ZMYND15Q9H091 742 aa4.1□□□□□ -1.75
SYNE2-212ENST00000554584 MYO15BQ96JP2 1530 aa4.1□□□□□ -1.75
SYNE2-212ENST00000554584 PMFBP1Q8TBY8 1022 aa4.09□□□□□ -1.75
SYNE2-212ENST00000554584 CCDC24Q8N4L8 307 aa4.09□□□□□ -1.75
SYNE2-212ENST00000554584 CIZ1Q9ULV3 898 aaPredicted RBP4.09□□□□□ -1.75
SYNE2-212ENST00000554584 PPARDQ03181 441 aa4.09□□□□□ -1.75
SYNE2-212ENST00000554584 SKAP1Q86WV1 359 aa4.09□□□□□ -1.75
SYNE2-212ENST00000554584 SSR1P43307 286 aaKnown RBP4.09□□□□□ -1.75
SYNE2-212ENST00000554584 RAB11FIP4Q86YS3 637 aa4.09□□□□□ -1.75
SYNE2-212ENST00000554584 HSCBQ8IWL3 235 aa4.09□□□□□ -1.75
SYNE2-212ENST00000554584 HSP90AB2PQ58FF8 381 aa4.09□□□□□ -1.75
SYNE2-212ENST00000554584 NEUROD6Q96NK8 337 aa4.09□□□□□ -1.75
SYNE2-212ENST00000554584 DTNBO60941 627 aa4.09□□□□□ -1.76
SYNE2-212ENST00000554584 PPP4R4Q6NUP7 873 aa4.09□□□□□ -1.76
SYNE2-212ENST00000554584 RFX1P22670 979 aa4.09□□□□□ -1.76
SYNE2-212ENST00000554584 SRRTQ9BXP5 876 aaKnown RBP4.09□□□□□ -1.76
SYNE2-212ENST00000554584 TNNT1P13805 278 aa4.09□□□□□ -1.76
SYNE2-212ENST00000554584 TMEM87AQ8NBN3 555 aa4.09□□□□□ -1.76
SYNE2-212ENST00000554584 TMX1Q9H3N1 280 aa4.09□□□□□ -1.76
SYNE2-212ENST00000554584 NUTM1Q86Y26 1132 aa4.08□□□□□ -1.76
SYNE2-212ENST00000554584 NFXL1Q6ZNB6 911 aa4.08□□□□□ -1.76
SYNE2-212ENST00000554584 GOLGA6L1Q8N7Z2 621 aa4.08□□□□□ -1.76
SYNE2-212ENST00000554584 C1orf115Q9H7X2 142 aa4.08□□□□□ -1.76
SYNE2-212ENST00000554584 ZNF408Q9H9D4 720 aa4.08□□□□□ -1.76
SYNE2-212ENST00000554584 TSHZ2Q9NRE2 1034 aa4.08□□□□□ -1.76
SYNE2-212ENST00000554584 MPHOSPH10O00566 681 aaKnown RBP4.08□□□□□ -1.76
SYNE2-212ENST00000554584 R3HCC1Q9Y3T6 440 aaKnown RBP4.08□□□□□ -1.76
SYNE2-212ENST00000554584 RSPH6AQ9H0K4 717 aa4.08□□□□□ -1.76
SYNE2-212ENST00000554584 GNL1P36915 607 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-212ENST00000554584 PDILTQ8N807 584 aa4.08□□□□□ -1.76
SYNE2-212ENST00000554584 MSNP26038 577 aaKnown RBP4.08□□□□□ -1.76
SYNE2-212ENST00000554584 NEFHP12036 1026 aa4.08□□□□□ -1.76
SYNE2-212ENST00000554584 TERF1P54274 439 aa4.08□□□□□ -1.76
SYNE2-212ENST00000554584 SEPT11Q9NVA2 429 aaKnown RBP4.08□□□□□ -1.76
SYNE2-212ENST00000554584 NOL10Q9BSC4 688 aaKnown RBP4.08□□□□□ -1.76
SYNE2-212ENST00000554584 PRPF38AQ8NAV1 312 aaKnown RBP4.08□□□□□ -1.76
SYNE2-212ENST00000554584 SF3B2Q13435 895 aaKnown RBP4.08□□□□□ -1.76
SYNE2-212ENST00000554584 VPS37DQ86XT2 251 aa4.08□□□□□ -1.76
SYNE2-212ENST00000554584 AKAP17AQ02040 695 aaKnown RBP4.08□□□□□ -1.76
SYNE2-212ENST00000554584 ZNF622Q969S3 477 aaKnown RBP eCLIP4.08□□□□□ -1.76
SYNE2-212ENST00000554584 CLGNO14967 610 aa4.07□□□□□ -1.76
SYNE2-212ENST00000554584 RBM26Q5T8P6 1007 aaKnown RBP4.07□□□□□ -1.76
SYNE2-212ENST00000554584 DHX8Q14562 1220 aaKnown RBP4.07□□□□□ -1.76
SYNE2-212ENST00000554584 ATP2C2O75185 946 aa4.07□□□□□ -1.76
SYNE2-212ENST00000554584 SSBP05455 408 aaKnown RBP eCLIP4.07□□□□□ -1.76
SYNE2-212ENST00000554584 ZC3H6P61129 1189 aaKnown RBP4.07□□□□□ -1.76
SYNE2-212ENST00000554584 PRKG1Q13976 671 aa4.07□□□□□ -1.76
SYNE2-212ENST00000554584 FAM193AP78312 1265 aa4.07□□□□□ -1.76
SYNE2-212ENST00000554584 DCAF1Q9Y4B6 1507 aa4.07□□□□□ -1.76
SYNE2-212ENST00000554584 HMGN5P82970 282 aaKnown RBP4.07□□□□□ -1.76
SYNE2-212ENST00000554584 KIF3BO15066 747 aa4.07□□□□□ -1.76
SYNE2-212ENST00000554584 PIP4K2AP48426 406 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-212ENST00000554584 TRERF1Q96PN7 1200 aa4.07□□□□□ -1.76
SYNE2-212ENST00000554584 JAG2Q9Y219 1238 aa4.07□□□□□ -1.76
SYNE2-212ENST00000554584 RAD54L2Q9Y4B4 1467 aa4.07□□□□□ -1.76
SYNE2-212ENST00000554584 EIF4G2P78344 907 aaKnown RBP eCLIP4.07□□□□□ -1.76
SYNE2-212ENST00000554584 KRT18P05783 430 aaKnown RBP4.07□□□□□ -1.76
SYNE2-212ENST00000554584 USHBP1Q8N6Y0 703 aa4.06□□□□□ -1.76
SYNE2-212ENST00000554584 GPIHBP1Q8IV16 184 aa4.06□□□□□ -1.76
SYNE2-212ENST00000554584 ENOX2Q16206 610 aaKnown RBP4.06□□□□□ -1.76
SYNE2-212ENST00000554584 NRDCO43847 1150 aa4.06□□□□□ -1.76
SYNE2-212ENST00000554584 MIS18AQ9NYP9 233 aa4.06□□□□□ -1.76
SYNE2-212ENST00000554584 VTI1AQ96AJ9 217 aa4.06□□□□□ -1.76
SYNE2-212ENST00000554584 TMEM132EQ6IEE7 984 aa4.06□□□□□ -1.76
SYNE2-212ENST00000554584 NUDCQ9Y266 331 aa4.06□□□□□ -1.76
SYNE2-212ENST00000554584 WWC2Q6AWC2 1192 aa4.06□□□□□ -1.76
SYNE2-212ENST00000554584 UQCRHP07919 91 aa4.06□□□□□ -1.76
SYNE2-212ENST00000554584 NUMA1Q14980 2115 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 CEBPAP49715 358 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-212ENST00000554584 PROCA1Q8NCQ7 364 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-212ENST00000554584 SCLT1Q96NL6 688 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 DNA2P51530 1060 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 BRPF1P55201 1214 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-212ENST00000554584 ODF2Q5BJF6 829 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 IQSEC3Q9UPP2 1182 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-212ENST00000554584 ACSBG1Q96GR2 724 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 PDIA4P13667 645 aaKnown RBP4.05□□□□□ -1.76
SYNE2-212ENST00000554584 MCCP23508 829 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 CEBPZQ03701 1054 aaKnown RBP4.05□□□□□ -1.76
SYNE2-212ENST00000554584 NEBLO76041 1014 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 SIL1Q9H173 461 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 PDCL3Q9H2J4 239 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 SMARCA2P51531 1590 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 PKNOX2Q96KN3 472 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 FAM69CQ0P6D2 419 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 HSPA5P11021 654 aaKnown RBP4.05□□□□□ -1.76
SYNE2-212ENST00000554584 F8W031 263 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-212ENST00000554584 DZIP1Q86YF9 867 aaKnown RBP4.05□□□□□ -1.76
SYNE2-212ENST00000554584 PSME1Q06323 249 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 HSP90AB3PQ58FF7 597 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 BANK1Q8NDB2 785 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 KCTD17Q8N5Z5 321 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 FMNL2Q96PY5 1086 aa4.05□□□□□ -1.76
SYNE2-212ENST00000554584 ANO2Q9NQ90 1003 aa4.04□□□□□ -1.76
SYNE2-212ENST00000554584 URB1O60287 2271 aaKnown RBP4.04□□□□□ -1.76
SYNE2-212ENST00000554584 HSPA2P54652 639 aa4.04□□□□□ -1.76
SYNE2-212ENST00000554584 PROSER2Q86WR7 435 aaPredicted RBP4.04□□□□□ -1.76
SYNE2-212ENST00000554584 STK3Q13188 491 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms