RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 ZFYVE9O95405 1425 aa18.07■□□□□ 0.48
TRAPPC6B-204ENST00000554018 CHGAP10645 457 aaKnown RBP18.07■□□□□ 0.48
TRAPPC6B-204ENST00000554018 HSPA1LP34931 641 aa18.07■□□□□ 0.48
TRAPPC6B-204ENST00000554018 RIMS2Q9UQ26 1411 aa18.06■□□□□ 0.48
TRAPPC6B-204ENST00000554018 BCANQ96GW7 911 aa18.06■□□□□ 0.48
TRAPPC6B-204ENST00000554018 SPHKAPQ2M3C7 1700 aa18.04■□□□□ 0.48
TRAPPC6B-204ENST00000554018 PPP1R15AO75807 674 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC6B-204ENST00000554018 KCNA6P17658 529 aa18.03■□□□□ 0.48
TRAPPC6B-204ENST00000554018 NAIPQ13075 1403 aa18.03■□□□□ 0.48
TRAPPC6B-204ENST00000554018 CHD2O14647 1828 aaKnown RBP18.02■□□□□ 0.48
TRAPPC6B-204ENST00000554018 HDGFP51858 240 aaKnown RBP18.02■□□□□ 0.48
TRAPPC6B-204ENST00000554018 NUTM2DQ5VT03 806 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC6B-204ENST00000554018 PLEKHG1Q9ULL1 1385 aa18.02■□□□□ 0.47
TRAPPC6B-204ENST00000554018 TMEM94Q12767 1356 aa18■□□□□ 0.47
TRAPPC6B-204ENST00000554018 NWD1Q149M9 1564 aa18■□□□□ 0.47
TRAPPC6B-204ENST00000554018 ILDR2Q71H61 639 aa17.99■□□□□ 0.47
TRAPPC6B-204ENST00000554018 PROSER2Q86WR7 435 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC6B-204ENST00000554018 RBM33Q96EV2 1170 aaKnown RBP17.99■□□□□ 0.47
TRAPPC6B-204ENST00000554018 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.98■□□□□ 0.47
TRAPPC6B-204ENST00000554018 HFM1A2PYH4 1435 aa17.96■□□□□ 0.47
TRAPPC6B-204ENST00000554018 NKTRP30414 1462 aaKnown RBP17.95■□□□□ 0.46
TRAPPC6B-204ENST00000554018 TBX22Q9Y458 520 aa17.95■□□□□ 0.46
TRAPPC6B-204ENST00000554018 TRIM52Q96A61 297 aa17.94■□□□□ 0.46
TRAPPC6B-204ENST00000554018 ADAMTS13Q76LX8 1427 aa17.94■□□□□ 0.46
TRAPPC6B-204ENST00000554018 CLTCL1P53675 1640 aa17.94■□□□□ 0.46
TRAPPC6B-204ENST00000554018 KIF1BO60333 1816 aa17.93■□□□□ 0.46
TRAPPC6B-204ENST00000554018 TRPM2O94759 1503 aa17.92■□□□□ 0.46
TRAPPC6B-204ENST00000554018 DIP2AQ14689 1571 aa17.91■□□□□ 0.46
TRAPPC6B-204ENST00000554018 MED1Q15648 1581 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC6B-204ENST00000554018 ZNF326Q5BKZ1 582 aaKnown RBP17.91■□□□□ 0.46
TRAPPC6B-204ENST00000554018 NRXN3Q9Y4C0 1643 aa17.89■□□□□ 0.45
TRAPPC6B-204ENST00000554018 ROBO1Q9Y6N7 1651 aa17.89■□□□□ 0.45
TRAPPC6B-204ENST00000554018 MSH6P52701 1360 aa17.88■□□□□ 0.45
TRAPPC6B-204ENST00000554018 FAM135BQ49AJ0 1406 aa17.88■□□□□ 0.45
TRAPPC6B-204ENST00000554018 SLC4A1APQ9BWU0 796 aaKnown RBP17.87■□□□□ 0.45
TRAPPC6B-204ENST00000554018 PIK3R4Q99570 1358 aa17.87■□□□□ 0.45
TRAPPC6B-204ENST00000554018 NEXMIFQ5QGS0 1516 aa17.86■□□□□ 0.45
TRAPPC6B-204ENST00000554018 SETBP1Q9Y6X0 1596 aa17.86■□□□□ 0.45
TRAPPC6B-204ENST00000554018 PTPRUQ92729 1446 aa17.85■□□□□ 0.45
TRAPPC6B-204ENST00000554018 SLAIN2Q9P270 581 aa17.84■□□□□ 0.45
TRAPPC6B-204ENST00000554018 AMOTL2Q9Y2J4 779 aa17.84■□□□□ 0.45
TRAPPC6B-204ENST00000554018 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC6B-204ENST00000554018 C14orf37Q86TY3 774 aa17.83■□□□□ 0.44
TRAPPC6B-204ENST00000554018 SOCS7O14512 581 aa17.82■□□□□ 0.44
TRAPPC6B-204ENST00000554018 FOXD1Q16676 465 aa17.82■□□□□ 0.44
TRAPPC6B-204ENST00000554018 NCOA3Q9Y6Q9 1424 aa17.81■□□□□ 0.44
TRAPPC6B-204ENST00000554018 XRN1Q8IZH2 1706 aaKnown RBP17.81■□□□□ 0.44
TRAPPC6B-204ENST00000554018 METP08581 1390 aa17.8■□□□□ 0.44
TRAPPC6B-204ENST00000554018 PHLPP1O60346 1717 aa17.79■□□□□ 0.44
TRAPPC6B-204ENST00000554018 PPLO60437 1756 aa17.79■□□□□ 0.44
TRAPPC6B-204ENST00000554018 PHF23Q9BUL5 403 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC6B-204ENST00000554018 C19orf44Q9H6X5 657 aa17.78■□□□□ 0.44
TRAPPC6B-204ENST00000554018 MPHOSPH9Q99550 1183 aa17.77■□□□□ 0.44
TRAPPC6B-204ENST00000554018 ATF3P18847 181 aa17.76■□□□□ 0.43
TRAPPC6B-204ENST00000554018 SETD1AO15047 1707 aaKnown RBP17.75■□□□□ 0.43
TRAPPC6B-204ENST00000554018 VGFO15240 615 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC6B-204ENST00000554018 CADPS2Q86UW7 1296 aa17.75■□□□□ 0.43
TRAPPC6B-204ENST00000554018 RPGRIP1LQ68CZ1 1315 aa17.73■□□□□ 0.43
TRAPPC6B-204ENST00000554018 SETD5Q9C0A6 1442 aa17.72■□□□□ 0.43
TRAPPC6B-204ENST00000554018 CCDC144AA2RUR9 1427 aa17.72■□□□□ 0.43
TRAPPC6B-204ENST00000554018 COL16A1Q07092 1604 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC6B-204ENST00000554018 NALCNQ8IZF0 1738 aa17.7■□□□□ 0.42
TRAPPC6B-204ENST00000554018 IFT172Q9UG01 1749 aa17.69■□□□□ 0.42
TRAPPC6B-204ENST00000554018 RGL3Q3MIN7 710 aa17.69■□□□□ 0.42
TRAPPC6B-204ENST00000554018 DCCP43146 1447 aa17.68■□□□□ 0.42
TRAPPC6B-204ENST00000554018 SPATA31E1Q6ZUB1 1445 aa17.68■□□□□ 0.42
TRAPPC6B-204ENST00000554018 RGS17Q9UGC6 210 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC6B-204ENST00000554018 ADGRL3Q9HAR2 1447 aa17.67■□□□□ 0.42
TRAPPC6B-204ENST00000554018 BRINP3Q76B58 766 aa17.67■□□□□ 0.42
TRAPPC6B-204ENST00000554018 AHDC1Q5TGY3 1603 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC6B-204ENST00000554018 ADGRF5Q8IZF2 1346 aa17.67■□□□□ 0.42
TRAPPC6B-204ENST00000554018 JCADQ9P266 1359 aa17.66■□□□□ 0.42
TRAPPC6B-204ENST00000554018 MST1RQ04912 1400 aa17.66■□□□□ 0.42
TRAPPC6B-204ENST00000554018 RAB3GAP2Q9H2M9 1393 aa17.66■□□□□ 0.42
TRAPPC6B-204ENST00000554018 ROBO2Q9HCK4 1378 aa17.66■□□□□ 0.42
TRAPPC6B-204ENST00000554018 ACIN1Q9UKV3 1341 aaKnown RBP17.65■□□□□ 0.42
TRAPPC6B-204ENST00000554018 PTCH1Q13635 1447 aa17.64■□□□□ 0.42
TRAPPC6B-204ENST00000554018 ASXL1Q8IXJ9 1541 aa17.63■□□□□ 0.41
TRAPPC6B-204ENST00000554018 NHSL1Q5SYE7 1610 aa17.62■□□□□ 0.41
TRAPPC6B-204ENST00000554018 SHPRHQ149N8 1683 aa17.62■□□□□ 0.41
TRAPPC6B-204ENST00000554018 ANKRD30BQ9BXX2 1392 aa17.62■□□□□ 0.41
TRAPPC6B-204ENST00000554018 PRAG1Q86YV5 1406 aa17.61■□□□□ 0.41
TRAPPC6B-204ENST00000554018 POTEAQ6S8J7 498 aa17.59■□□□□ 0.41
TRAPPC6B-204ENST00000554018 STK26Q9P289 416 aa17.59■□□□□ 0.41
TRAPPC6B-204ENST00000554018 LRP6O75581 1613 aa17.58■□□□□ 0.41
TRAPPC6B-204ENST00000554018 DDX17Q92841 729 aaKnown RBP17.58■□□□□ 0.4
TRAPPC6B-204ENST00000554018 C1orf167Q5SNV9 1468 aa17.57■□□□□ 0.4
TRAPPC6B-204ENST00000554018 SPATA31A6Q5VVP1 1343 aa17.57■□□□□ 0.4
TRAPPC6B-204ENST00000554018 TMEM132EQ6IEE7 984 aa17.57■□□□□ 0.4
TRAPPC6B-204ENST00000554018 PIK3C2GO75747 1445 aa17.56■□□□□ 0.4
TRAPPC6B-204ENST00000554018 KNDC1Q76NI1 1749 aa17.55■□□□□ 0.4
TRAPPC6B-204ENST00000554018 LRPPRCP42704 1394 aaKnown RBP17.54■□□□□ 0.4
TRAPPC6B-204ENST00000554018 MEX3CQ5U5Q3 659 aaKnown RBP17.54■□□□□ 0.4
TRAPPC6B-204ENST00000554018 WAPLQ7Z5K2 1190 aa17.54■□□□□ 0.4
TRAPPC6B-204ENST00000554018 ORAI2Q96SN7 254 aa17.54■□□□□ 0.4
TRAPPC6B-204ENST00000554018 NUTM2BA6NNL0 878 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC6B-204ENST00000554018 NUTM2EB1AL46 878 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC6B-204ENST00000554018 NUTM2AQ8IVF1 878 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC6B-204ENST00000554018 TECPR2O15040 1411 aa17.53■□□□□ 0.4
TRAPPC6B-204ENST00000554018 LAMC1P11047 1609 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms