RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 UNC13BO14795 1591 aa26.47■■□□□ 1.83
SEC23A-206ENST00000553970 SLC26A8Q96RN1 970 aa26.47■■□□□ 1.83
SEC23A-206ENST00000553970 PROSER2Q86WR7 435 aaPredicted RBP26.46■■□□□ 1.83
SEC23A-206ENST00000553970 PPP1R15AO75807 674 aaPredicted RBP26.45■■□□□ 1.82
SEC23A-206ENST00000553970 NWD1Q149M9 1564 aa26.45■■□□□ 1.82
SEC23A-206ENST00000553970 SENP3Q9H4L4 574 aaPredicted RBP26.44■■□□□ 1.82
SEC23A-206ENST00000553970 PLEKHG1Q9ULL1 1385 aa26.44■■□□□ 1.82
SEC23A-206ENST00000553970 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.43■■□□□ 1.82
SEC23A-206ENST00000553970 ZFYVE9O95405 1425 aa26.42■■□□□ 1.82
SEC23A-206ENST00000553970 MSH6P52701 1360 aa26.41■■□□□ 1.82
SEC23A-206ENST00000553970 RIMS2Q9UQ26 1411 aa26.4■■□□□ 1.82
SEC23A-206ENST00000553970 TMEM131LA2VDJ0 1609 aa26.39■■□□□ 1.82
SEC23A-206ENST00000553970 IQGAP3Q86VI3 1631 aa26.37■■□□□ 1.81
SEC23A-206ENST00000553970 MYO5BQ9ULV0 1848 aa26.35■■□□□ 1.81
SEC23A-206ENST00000553970 NCOA3Q9Y6Q9 1424 aa26.34■■□□□ 1.81
SEC23A-206ENST00000553970 CHGAP10645 457 aaKnown RBP26.34■■□□□ 1.81
SEC23A-206ENST00000553970 TBX22Q9Y458 520 aa26.34■■□□□ 1.81
SEC23A-206ENST00000553970 E9PCH4 1651 aa26.34■■□□□ 1.81
SEC23A-206ENST00000553970 ROBO1Q9Y6N7 1651 aa26.34■■□□□ 1.81
SEC23A-206ENST00000553970 DIP2AQ14689 1571 aa26.33■■□□□ 1.81
SEC23A-206ENST00000553970 CHD2O14647 1828 aaKnown RBP26.33■■□□□ 1.81
SEC23A-206ENST00000553970 NUP155O75694 1391 aa26.32■■□□□ 1.8
SEC23A-206ENST00000553970 PIK3R4Q99570 1358 aa26.31■■□□□ 1.8
SEC23A-206ENST00000553970 SLAIN2Q9P270 581 aa26.28■■□□□ 1.8
SEC23A-206ENST00000553970 RBM33Q96EV2 1170 aaKnown RBP26.27■■□□□ 1.8
SEC23A-206ENST00000553970 ITGAEP38570 1179 aa26.24■■□□□ 1.79
SEC23A-206ENST00000553970 C14orf37Q86TY3 774 aa26.24■■□□□ 1.79
SEC23A-206ENST00000553970 TRPM2O94759 1503 aa26.22■■□□□ 1.79
SEC23A-206ENST00000553970 ADAMTS13Q76LX8 1427 aa26.22■■□□□ 1.79
SEC23A-206ENST00000553970 CADPS2Q86UW7 1296 aa26.21■■□□□ 1.79
SEC23A-206ENST00000553970 JCADQ9P266 1359 aa26.2■■□□□ 1.78
SEC23A-206ENST00000553970 PHLPP1O60346 1717 aa26.19■■□□□ 1.78
SEC23A-206ENST00000553970 ATF3P18847 181 aa26.18■■□□□ 1.78
SEC23A-206ENST00000553970 C19orf44Q9H6X5 657 aa26.18■■□□□ 1.78
SEC23A-206ENST00000553970 RGS17Q9UGC6 210 aaPredicted RBP26.17■■□□□ 1.78
SEC23A-206ENST00000553970 SPHKAPQ2M3C7 1700 aa26.17■■□□□ 1.78
SEC23A-206ENST00000553970 NUTM2DQ5VT03 806 aaPredicted RBP26.16■■□□□ 1.78
SEC23A-206ENST00000553970 AMOTL2Q9Y2J4 779 aa26.12■■□□□ 1.77
SEC23A-206ENST00000553970 SETBP1Q9Y6X0 1596 aa26.12■■□□□ 1.77
SEC23A-206ENST00000553970 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.11■■□□□ 1.77
SEC23A-206ENST00000553970 ZNF326Q5BKZ1 582 aaKnown RBP26.11■■□□□ 1.77
SEC23A-206ENST00000553970 DCCP43146 1447 aa26.11■■□□□ 1.77
SEC23A-206ENST00000553970 COL16A1Q07092 1604 aaPredicted RBP26.09■■□□□ 1.77
SEC23A-206ENST00000553970 SPATA31A6Q5VVP1 1343 aa26.09■■□□□ 1.77
SEC23A-206ENST00000553970 RRBP1Q9P2E9 1410 aaKnown RBP26.08■■□□□ 1.77
SEC23A-206ENST00000553970 AHDC1Q5TGY3 1603 aaPredicted RBP26.07■■□□□ 1.76
SEC23A-206ENST00000553970 PPARGC1BQ86YN6 1023 aaKnown RBP26.07■■□□□ 1.76
SEC23A-206ENST00000553970 POTEAQ6S8J7 498 aa26.04■■□□□ 1.76
SEC23A-206ENST00000553970 XRN1Q8IZH2 1706 aaKnown RBP26.04■■□□□ 1.76
SEC23A-206ENST00000553970 PTPRUQ92729 1446 aa26.04■■□□□ 1.76
SEC23A-206ENST00000553970 NRXN3Q9Y4C0 1643 aa26.03■■□□□ 1.76
SEC23A-206ENST00000553970 NAIPQ13075 1403 aa26.01■■□□□ 1.75
SEC23A-206ENST00000553970 KIF1BO60333 1816 aa26■■□□□ 1.75
SEC23A-206ENST00000553970 SHPRHQ149N8 1683 aa26■■□□□ 1.75
SEC23A-206ENST00000553970 MEX3CQ5U5Q3 659 aaKnown RBP26■■□□□ 1.75
SEC23A-206ENST00000553970 CLTCL1P53675 1640 aa25.99■■□□□ 1.75
SEC23A-206ENST00000553970 ZNF772Q68DY9 489 aaPredicted RBP25.98■■□□□ 1.75
SEC23A-206ENST00000553970 NEXMIFQ5QGS0 1516 aa25.98■■□□□ 1.75
SEC23A-206ENST00000553970 BRINP3Q76B58 766 aa25.97■■□□□ 1.75
SEC23A-206ENST00000553970 METP08581 1390 aa25.95■■□□□ 1.75
SEC23A-206ENST00000553970 VGFO15240 615 aaPredicted RBP25.95■■□□□ 1.74
SEC23A-206ENST00000553970 HFM1A2PYH4 1435 aa25.95■■□□□ 1.74
SEC23A-206ENST00000553970 ADGRL3Q9HAR2 1447 aa25.94■■□□□ 1.74
SEC23A-206ENST00000553970 ASXL1Q8IXJ9 1541 aa25.93■■□□□ 1.74
SEC23A-206ENST00000553970 TRIM52Q96A61 297 aa25.93■■□□□ 1.74
SEC23A-206ENST00000553970 MST1RQ04912 1400 aa25.92■■□□□ 1.74
SEC23A-206ENST00000553970 RPGRIP1LQ68CZ1 1315 aa25.91■■□□□ 1.74
SEC23A-206ENST00000553970 LRP6O75581 1613 aa25.91■■□□□ 1.74
SEC23A-206ENST00000553970 SETD5Q9C0A6 1442 aa25.9■■□□□ 1.74
SEC23A-206ENST00000553970 LRRC59Q96AG4 307 aaKnown RBP25.89■■□□□ 1.74
SEC23A-206ENST00000553970 PTCH1Q13635 1447 aa25.88■■□□□ 1.73
SEC23A-206ENST00000553970 SLC4A1APQ9BWU0 796 aaKnown RBP25.88■■□□□ 1.73
SEC23A-206ENST00000553970 NHSL1Q5SYE7 1610 aa25.88■■□□□ 1.73
SEC23A-206ENST00000553970 NALCNQ8IZF0 1738 aa25.84■■□□□ 1.73
SEC23A-206ENST00000553970 PRAG1Q86YV5 1406 aa25.83■■□□□ 1.73
SEC23A-206ENST00000553970 NUTM2BA6NNL0 878 aaPredicted RBP25.81■■□□□ 1.72
SEC23A-206ENST00000553970 NUTM2EB1AL46 878 aaPredicted RBP25.81■■□□□ 1.72
SEC23A-206ENST00000553970 NUTM2AQ8IVF1 878 aaPredicted RBP25.81■■□□□ 1.72
SEC23A-206ENST00000553970 SETD1AO15047 1707 aaKnown RBP25.8■■□□□ 1.72
SEC23A-206ENST00000553970 RXRBP28702 533 aa25.79■■□□□ 1.72
SEC23A-206ENST00000553970 ACIN1Q9UKV3 1341 aaKnown RBP25.78■■□□□ 1.72
SEC23A-206ENST00000553970 C1orf167Q5SNV9 1468 aa25.78■■□□□ 1.72
SEC23A-206ENST00000553970 CDK12Q9NYV4 1490 aaPredicted RBP25.78■■□□□ 1.72
SEC23A-206ENST00000553970 PPLO60437 1756 aa25.77■■□□□ 1.72
SEC23A-206ENST00000553970 CCDC144AA2RUR9 1427 aa25.75■■□□□ 1.71
SEC23A-206ENST00000553970 ROBO2Q9HCK4 1378 aa25.75■■□□□ 1.71
SEC23A-206ENST00000553970 LAMC1P11047 1609 aa25.74■■□□□ 1.71
SEC23A-206ENST00000553970 PNPLA6Q8IY17 1366 aa25.74■■□□□ 1.71
SEC23A-206ENST00000553970 AFF2P51816 1311 aa25.74■■□□□ 1.71
SEC23A-206ENST00000553970 ANKRD30BQ9BXX2 1392 aa25.7■■□□□ 1.71
SEC23A-206ENST00000553970 C8orf37Q96NL8 207 aa25.69■■□□□ 1.7
SEC23A-206ENST00000553970 SOS2Q07890 1332 aaPredicted RBP25.68■■□□□ 1.7
SEC23A-206ENST00000553970 DDX17Q92841 729 aaKnown RBP25.67■■□□□ 1.7
SEC23A-206ENST00000553970 CDC42BPGQ6DT37 1551 aa25.66■■□□□ 1.7
SEC23A-206ENST00000553970 RBM6P78332 1123 aaKnown RBP25.65■■□□□ 1.7
SEC23A-206ENST00000553970 UPF1Q92900 1129 aaKnown RBP eCLIP25.65■■□□□ 1.7
SEC23A-206ENST00000553970 NPHP3Q7Z494 1330 aa25.64■■□□□ 1.7
SEC23A-206ENST00000553970 ORAI2Q96SN7 254 aa25.64■■□□□ 1.7
SEC23A-206ENST00000553970 NGLY1Q96IV0 654 aa25.63■■□□□ 1.69
SEC23A-206ENST00000553970 MPHOSPH9Q99550 1183 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms