RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 TMEM134Q9H6X4 195 aa8.69□□□□□ -1.02
PCNX4-206ENST00000553513 MAP2K5Q13163 448 aa8.68□□□□□ -1.02
PCNX4-206ENST00000553513 MINK1Q8N4C8 1332 aaPredicted RBP8.65□□□□□ -1.02
PCNX4-206ENST00000553513 PLA2G2EQ9NZK7 142 aa8.65□□□□□ -1.02
PCNX4-206ENST00000553513 IRF6O14896 467 aa8.64□□□□□ -1.03
PCNX4-206ENST00000553513 ZC3H15Q8WU90 426 aaKnown RBP8.64□□□□□ -1.03
PCNX4-206ENST00000553513 ZMYND10O75800 440 aa8.62□□□□□ -1.03
PCNX4-206ENST00000553513 PRR14Q9BWN1 585 aa8.62□□□□□ -1.03
PCNX4-206ENST00000553513 KRI1Q8N9T8 703 aaKnown RBP8.61□□□□□ -1.03
PCNX4-206ENST00000553513 RSPH4AQ5TD94 716 aa8.6□□□□□ -1.03
PCNX4-206ENST00000553513 BARGINQ6ZT62 677 aa8.6□□□□□ -1.03
PCNX4-206ENST00000553513 CCDC102AQ96A19 550 aa8.6□□□□□ -1.03
PCNX4-206ENST00000553513 PHOX2BQ99453 314 aa8.6□□□□□ -1.03
PCNX4-206ENST00000553513 DAXXQ9UER7 740 aaPredicted RBP8.6□□□□□ -1.03
PCNX4-206ENST00000553513 ITGBL1O95965 494 aaPredicted RBP8.59□□□□□ -1.03
PCNX4-206ENST00000553513 APLP1P51693 650 aa8.59□□□□□ -1.03
PCNX4-206ENST00000553513 IFFO2Q5TF58 517 aa8.58□□□□□ -1.04
PCNX4-206ENST00000553513 NLRP7Q8WX94 980 aa8.58□□□□□ -1.04
PCNX4-206ENST00000553513 KMT5BQ4FZB7 885 aa8.57□□□□□ -1.04
PCNX4-206ENST00000553513 SULF1Q8IWU6 871 aa8.57□□□□□ -1.04
PCNX4-206ENST00000553513 CFHP08603 1231 aa8.56□□□□□ -1.04
PCNX4-206ENST00000553513 SLC10A3P09131 477 aa8.56□□□□□ -1.04
PCNX4-206ENST00000553513 KCNC4Q03721 635 aa8.56□□□□□ -1.04
PCNX4-206ENST00000553513 DDX11L8A8MPP1 907 aa8.55□□□□□ -1.04
PCNX4-206ENST00000553513 RDH13Q8NBN7 331 aa8.55□□□□□ -1.04
PCNX4-206ENST00000553513 MTRQ99707 1265 aa8.54□□□□□ -1.04
PCNX4-206ENST00000553513 IL21Q9HBE4 155 aa8.54□□□□□ -1.04
PCNX4-206ENST00000553513 ACTN4O43707 911 aaKnown RBP8.53□□□□□ -1.04
PCNX4-206ENST00000553513 CLCN1P35523 988 aa8.53□□□□□ -1.04
PCNX4-206ENST00000553513 MDM2Q00987 491 aaPredicted RBP8.53□□□□□ -1.04
PCNX4-206ENST00000553513 TJAP1Q5JTD0 557 aa8.53□□□□□ -1.04
PCNX4-206ENST00000553513 PCDHB3Q9Y5E6 796 aa8.53□□□□□ -1.04
PCNX4-206ENST00000553513 GPCPD1Q9NPB8 672 aa8.51□□□□□ -1.05
PCNX4-206ENST00000553513 COPS2P61201 443 aa8.5□□□□□ -1.05
PCNX4-206ENST00000553513 AK7Q96M32 723 aa8.5□□□□□ -1.05
PCNX4-206ENST00000553513 A0A0G2JS52 829 aa8.49□□□□□ -1.05
PCNX4-206ENST00000553513 CD46P15529 392 aa8.48□□□□□ -1.05
PCNX4-206ENST00000553513 GCGRP47871 477 aa8.48□□□□□ -1.05
PCNX4-206ENST00000553513 TTLL12Q14166 644 aaPredicted RBP8.48□□□□□ -1.05
PCNX4-206ENST00000553513 AMHR2Q16671 573 aa8.48□□□□□ -1.05
PCNX4-206ENST00000553513 BLOC1S3Q6QNY0 202 aa8.48□□□□□ -1.05
PCNX4-206ENST00000553513 ZNF516Q92618 1163 aa8.47□□□□□ -1.05
PCNX4-206ENST00000553513 TMUB1Q9BVT8 246 aa8.47□□□□□ -1.05
PCNX4-206ENST00000553513 TRIM66O15016 1216 aa8.46□□□□□ -1.06
PCNX4-206ENST00000553513 ZPR1O75312 459 aa8.46□□□□□ -1.06
PCNX4-206ENST00000553513 NR1I2O75469 434 aa8.46□□□□□ -1.06
PCNX4-206ENST00000553513 FAM217BQ9NTX9 383 aaPredicted RBP8.46□□□□□ -1.06
PCNX4-206ENST00000553513 FUT2Q10981 343 aa8.45□□□□□ -1.06
PCNX4-206ENST00000553513 SLC24A3Q9HC58 644 aa8.45□□□□□ -1.06
PCNX4-206ENST00000553513 ATP6V1AP38606 617 aa8.44□□□□□ -1.06
PCNX4-206ENST00000553513 GRIPAP1Q4V328 841 aa8.44□□□□□ -1.06
PCNX4-206ENST00000553513 PUS10Q3MIT2 529 aaKnown RBP8.43□□□□□ -1.06
PCNX4-206ENST00000553513 REPIN1Q9BWE0 567 aaKnown RBP8.43□□□□□ -1.06
PCNX4-206ENST00000553513 KDM4AO75164 1064 aa8.42□□□□□ -1.06
PCNX4-206ENST00000553513 RGS20O76081 388 aa8.42□□□□□ -1.06
PCNX4-206ENST00000553513 SSTR3P32745 418 aaPredicted RBP8.42□□□□□ -1.06
PCNX4-206ENST00000553513 GIGYF2Q6Y7W6 1299 aaKnown RBP8.42□□□□□ -1.06
PCNX4-206ENST00000553513 USP46P62068 366 aa8.41□□□□□ -1.06
PCNX4-206ENST00000553513 MORN1Q5T089 497 aa8.41□□□□□ -1.06
PCNX4-206ENST00000553513 SCUBE3Q8IX30 993 aa8.41□□□□□ -1.06
PCNX4-206ENST00000553513 PARP9Q8IXQ6 854 aa8.41□□□□□ -1.06
PCNX4-206ENST00000553513 NKX2-3Q8TAU0 364 aa8.41□□□□□ -1.06
PCNX4-206ENST00000553513 GGCXP38435 758 aa8.4□□□□□ -1.06
PCNX4-206ENST00000553513 PDE4DQ08499 809 aa8.4□□□□□ -1.06
PCNX4-206ENST00000553513 TLL1O43897 1013 aa8.39□□□□□ -1.07
PCNX4-206ENST00000553513 NUTM1Q86Y26 1132 aa8.39□□□□□ -1.07
PCNX4-206ENST00000553513 ADH1BP00325 375 aa8.38□□□□□ -1.07
PCNX4-206ENST00000553513 PPP1R18Q6NYC8 613 aa8.38□□□□□ -1.07
PCNX4-206ENST00000553513 SLC27A5Q9Y2P5 690 aa8.38□□□□□ -1.07
PCNX4-206ENST00000553513 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.37□□□□□ -1.07
PCNX4-206ENST00000553513 HOXA2O43364 376 aa8.36□□□□□ -1.07
PCNX4-206ENST00000553513 FMNL1O95466 1100 aaPredicted RBP8.36□□□□□ -1.07
PCNX4-206ENST00000553513 Q3C1V9 767 aa8.36□□□□□ -1.07
PCNX4-206ENST00000553513 SPSB2Q99619 263 aa8.36□□□□□ -1.07
PCNX4-206ENST00000553513 SALL2Q9Y467 1007 aaPredicted RBP8.36□□□□□ -1.07
PCNX4-206ENST00000553513 BEGAINQ9BUH8 593 aa8.35□□□□□ -1.07
PCNX4-206ENST00000553513 MS4A1P11836 297 aa8.34□□□□□ -1.07
PCNX4-206ENST00000553513 THAP11Q96EK4 314 aa8.34□□□□□ -1.07
PCNX4-206ENST00000553513 SLC6A16Q9GZN6 736 aa8.34□□□□□ -1.07
PCNX4-206ENST00000553513 S1PR4O95977 384 aa8.33□□□□□ -1.08
PCNX4-206ENST00000553513 DIXDC1Q155Q3 683 aa8.33□□□□□ -1.08
PCNX4-206ENST00000553513 BRICD5Q6PL45 260 aa8.33□□□□□ -1.08
PCNX4-206ENST00000553513 SPIRE2Q8WWL2 714 aa8.33□□□□□ -1.08
PCNX4-206ENST00000553513 RNF223E7ERA6 249 aa8.31□□□□□ -1.08
PCNX4-206ENST00000553513 RNF19BQ6ZMZ0 732 aa8.31□□□□□ -1.08
PCNX4-206ENST00000553513 HLA-CQ95604 372 aa8.31□□□□□ -1.08
PCNX4-206ENST00000553513 MSS51Q4VC12 460 aa8.3□□□□□ -1.08
PCNX4-206ENST00000553513 ANKLE1Q8NAG6 615 aa8.3□□□□□ -1.08
PCNX4-206ENST00000553513 FDX1P10109 184 aa8.29□□□□□ -1.08
PCNX4-206ENST00000553513 GUCA2AQ02747 115 aa8.29□□□□□ -1.08
PCNX4-206ENST00000553513 TPRNQ4KMQ1 711 aa8.29□□□□□ -1.08
PCNX4-206ENST00000553513 FAM160A2Q8N612 972 aaPredicted RBP8.29□□□□□ -1.08
PCNX4-206ENST00000553513 USB1Q9BQ65 265 aaKnown RBP8.29□□□□□ -1.08
PCNX4-206ENST00000553513 TBC1D2Q9BYX2 928 aa8.29□□□□□ -1.08
PCNX4-206ENST00000553513 PRKD2Q9BZL6 878 aa8.28□□□□□ -1.08
PCNX4-206ENST00000553513 V9GY48 417 aaPredicted RBP8.28□□□□□ -1.08
PCNX4-206ENST00000553513 MOXD2PA6NHM9 499 aa8.27□□□□□ -1.09
PCNX4-206ENST00000553513 PPEF1O14829 653 aaPredicted RBP8.27□□□□□ -1.09
PCNX4-206ENST00000553513 NDUFV2P19404 249 aa8.27□□□□□ -1.09
PCNX4-206ENST00000553513 GJA5P36382 358 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms