RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 LMTK2Q8IWU2 1503 aa15.33■□□□□ 0.04
ACTN1-208ENST00000553370 GCC2Q8IWJ2 1684 aa15.32■□□□□ 0.04
ACTN1-208ENST00000553370 BCANQ96GW7 911 aa15.32■□□□□ 0.04
ACTN1-208ENST00000553370 TET3O43151 1660 aa15.31■□□□□ 0.04
ACTN1-208ENST00000553370 LTKP29376 864 aa15.3■□□□□ 0.04
ACTN1-208ENST00000553370 TMEM2Q9UHN6 1383 aa15.3■□□□□ 0.04
ACTN1-208ENST00000553370 ALKQ9UM73 1620 aa15.3■□□□□ 0.04
ACTN1-208ENST00000553370 ADGRL2O95490 1459 aa15.29■□□□□ 0.04
ACTN1-208ENST00000553370 ANKRD50Q9ULJ7 1429 aa15.27■□□□□ 0.04
ACTN1-208ENST00000553370 PPP1R15AO75807 674 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-208ENST00000553370 RPRD2Q5VT52 1461 aaKnown RBP15.25■□□□□ 0.03
ACTN1-208ENST00000553370 UNC13BO14795 1591 aa15.24■□□□□ 0.03
ACTN1-208ENST00000553370 MYCNP04198 464 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-208ENST00000553370 IDI1Q13907 227 aa15.24■□□□□ 0.03
ACTN1-208ENST00000553370 ROBO1Q9Y6N7 1651 aa15.23■□□□□ 0.03
ACTN1-208ENST00000553370 ATXN8OSP0DMR3 200 aa15.23■□□□□ 0.03
ACTN1-208ENST00000553370 NOS1P29475 1434 aa15.23■□□□□ 0.03
ACTN1-208ENST00000553370 CHGAP10645 457 aaKnown RBP15.22■□□□□ 0.03
ACTN1-208ENST00000553370 SLC26A8Q96RN1 970 aa15.22■□□□□ 0.03
ACTN1-208ENST00000553370 SLC52A1Q9NWF4 448 aa15.22■□□□□ 0.03
ACTN1-208ENST00000553370 TMEM94Q12767 1356 aa15.22■□□□□ 0.03
ACTN1-208ENST00000553370 E9PCH4 1651 aa15.22■□□□□ 0.03
ACTN1-208ENST00000553370 CHD2O14647 1828 aaKnown RBP15.22■□□□□ 0.03
ACTN1-208ENST00000553370 NKTRP30414 1462 aaKnown RBP15.21■□□□□ 0.03
ACTN1-208ENST00000553370 NWD1Q149M9 1564 aa15.21■□□□□ 0.03
ACTN1-208ENST00000553370 PROSER2Q86WR7 435 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-208ENST00000553370 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
ACTN1-208ENST00000553370 TMEM131LA2VDJ0 1609 aa15.2■□□□□ 0.02
ACTN1-208ENST00000553370 IQGAP3Q86VI3 1631 aa15.2■□□□□ 0.02
ACTN1-208ENST00000553370 KCNA6P17658 529 aa15.19■□□□□ 0.02
ACTN1-208ENST00000553370 ITGAEP38570 1179 aa15.19■□□□□ 0.02
ACTN1-208ENST00000553370 HDGFP51858 240 aaKnown RBP15.19■□□□□ 0.02
ACTN1-208ENST00000553370 PHLPP1O60346 1717 aa15.19■□□□□ 0.02
ACTN1-208ENST00000553370 MSH6P52701 1360 aa15.19■□□□□ 0.02
ACTN1-208ENST00000553370 RIMS2Q9UQ26 1411 aa15.18■□□□□ 0.02
ACTN1-208ENST00000553370 C14orf37Q86TY3 774 aa15.17■□□□□ 0.02
ACTN1-208ENST00000553370 RBM33Q96EV2 1170 aaKnown RBP15.16■□□□□ 0.02
ACTN1-208ENST00000553370 SPHKAPQ2M3C7 1700 aa15.16■□□□□ 0.02
ACTN1-208ENST00000553370 PLEKHG1Q9ULL1 1385 aa15.15■□□□□ 0.02
ACTN1-208ENST00000553370 FAM135BQ49AJ0 1406 aa15.14■□□□□ 0.01
ACTN1-208ENST00000553370 DIP2AQ14689 1571 aa15.14■□□□□ 0.01
ACTN1-208ENST00000553370 ROCK1Q13464 1354 aa15.13■□□□□ 0.01
ACTN1-208ENST00000553370 ZFYVE9O95405 1425 aa15.13■□□□□ 0.01
ACTN1-208ENST00000553370 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.13■□□□□ 0.01
ACTN1-208ENST00000553370 NUP155O75694 1391 aa15.11■□□□□ 0.01
ACTN1-208ENST00000553370 NUTM2DQ5VT03 806 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-208ENST00000553370 KIF1BO60333 1816 aa15.1■□□□□ 0.01
ACTN1-208ENST00000553370 AMER1Q5JTC6 1135 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-208ENST00000553370 PPARGC1BQ86YN6 1023 aaKnown RBP15.1■□□□□ 0.01
ACTN1-208ENST00000553370 TRPM2O94759 1503 aa15.1■□□□□ 0.01
ACTN1-208ENST00000553370 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-208ENST00000553370 SETD1AO15047 1707 aaKnown RBP15.06■□□□□ 0
ACTN1-208ENST00000553370 ZNF326Q5BKZ1 582 aaKnown RBP15.06■□□□□ 0
ACTN1-208ENST00000553370 SLAIN2Q9P270 581 aa15.06■□□□□ 0
ACTN1-208ENST00000553370 ATF3P18847 181 aa15.05■□□□□ -0
ACTN1-208ENST00000553370 RTN4Q9NQC3 1192 aaKnown RBP15.05■□□□□ -0
ACTN1-208ENST00000553370 TBX22Q9Y458 520 aa15.04■□□□□ -0
ACTN1-208ENST00000553370 COL16A1Q07092 1604 aaPredicted RBP15.03■□□□□ -0
ACTN1-208ENST00000553370 JCADQ9P266 1359 aa15.03■□□□□ -0
ACTN1-208ENST00000553370 MEX3CQ5U5Q3 659 aaKnown RBP15.03■□□□□ -0
ACTN1-208ENST00000553370 ADAMTS13Q76LX8 1427 aa15.02■□□□□ -0
ACTN1-208ENST00000553370 PIK3R4Q99570 1358 aa15.02■□□□□ -0
ACTN1-208ENST00000553370 FKBP8Q14318 412 aa15.02■□□□□ -0
ACTN1-208ENST00000553370 CADPS2Q86UW7 1296 aa15.02■□□□□ -0
ACTN1-208ENST00000553370 NCOA3Q9Y6Q9 1424 aa15.01□□□□□ -0.01
ACTN1-208ENST00000553370 SHPRHQ149N8 1683 aa15.01□□□□□ -0.01
ACTN1-208ENST00000553370 CLTCL1P53675 1640 aa15.01□□□□□ -0.01
ACTN1-208ENST00000553370 XRN1Q8IZH2 1706 aaKnown RBP15□□□□□ -0.01
ACTN1-208ENST00000553370 NRXN3Q9Y4C0 1643 aa15□□□□□ -0.01
ACTN1-208ENST00000553370 SETBP1Q9Y6X0 1596 aa14.99□□□□□ -0.01
ACTN1-208ENST00000553370 AHDC1Q5TGY3 1603 aaPredicted RBP14.99□□□□□ -0.01
ACTN1-208ENST00000553370 C19orf44Q9H6X5 657 aa14.98□□□□□ -0.01
ACTN1-208ENST00000553370 RGS17Q9UGC6 210 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-208ENST00000553370 AMOTL2Q9Y2J4 779 aa14.98□□□□□ -0.01
ACTN1-208ENST00000553370 NALCNQ8IZF0 1738 aa14.96□□□□□ -0.01
ACTN1-208ENST00000553370 TRIM52Q96A61 297 aa14.96□□□□□ -0.01
ACTN1-208ENST00000553370 POTEAQ6S8J7 498 aa14.95□□□□□ -0.02
ACTN1-208ENST00000553370 SPATA31A6Q5VVP1 1343 aa14.94□□□□□ -0.02
ACTN1-208ENST00000553370 DCCP43146 1447 aa14.94□□□□□ -0.02
ACTN1-208ENST00000553370 PTPRUQ92729 1446 aa14.94□□□□□ -0.02
ACTN1-208ENST00000553370 NEXMIFQ5QGS0 1516 aa14.94□□□□□ -0.02
ACTN1-208ENST00000553370 ASXL1Q8IXJ9 1541 aa14.93□□□□□ -0.02
ACTN1-208ENST00000553370 NHSL1Q5SYE7 1610 aa14.93□□□□□ -0.02
ACTN1-208ENST00000553370 NUTM2BA6NNL0 878 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-208ENST00000553370 NUTM2EB1AL46 878 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-208ENST00000553370 SLC24A1O60721 1099 aa14.92□□□□□ -0.02
ACTN1-208ENST00000553370 NUTM2AQ8IVF1 878 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-208ENST00000553370 PPLO60437 1756 aa14.92□□□□□ -0.02
ACTN1-208ENST00000553370 LRP6O75581 1613 aa14.92□□□□□ -0.02
ACTN1-208ENST00000553370 RRBP1Q9P2E9 1410 aaKnown RBP14.92□□□□□ -0.02
ACTN1-208ENST00000553370 NAIPQ13075 1403 aa14.91□□□□□ -0.02
ACTN1-208ENST00000553370 ZNF772Q68DY9 489 aaPredicted RBP14.9□□□□□ -0.02
ACTN1-208ENST00000553370 BRINP3Q76B58 766 aa14.9□□□□□ -0.02
ACTN1-208ENST00000553370 ADGRL3Q9HAR2 1447 aa14.9□□□□□ -0.02
ACTN1-208ENST00000553370 METP08581 1390 aa14.89□□□□□ -0.03
ACTN1-208ENST00000553370 MST1RQ04912 1400 aa14.88□□□□□ -0.03
ACTN1-208ENST00000553370 HFM1A2PYH4 1435 aa14.86□□□□□ -0.03
ACTN1-208ENST00000553370 VGFO15240 615 aaPredicted RBP14.85□□□□□ -0.03
ACTN1-208ENST00000553370 PTCH1Q13635 1447 aa14.83□□□□□ -0.03
ACTN1-208ENST00000553370 LRRC59Q96AG4 307 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms