RNA–Protein interactions for RNA: ENST00000551783.1

RPLP0-223, Transcript of ribosomal protein lateral stalk subunit P0, human

TSL 2

Gene RPLP0, Length 676 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPLP0-223	ENST00000551783	SLC26A8	Q96RN1	970 aa		29.59	■■■□□ 2.33
RPLP0-223	ENST00000551783	ZFYVE9	O95405	1425 aa		29.58	■■■□□ 2.33
RPLP0-223	ENST00000551783	ILDR2	Q71H61	639 aa		29.56	■■■□□ 2.32
RPLP0-223	ENST00000551783	SPHKAP	Q2M3C7	1700 aa		29.54	■■■□□ 2.32
RPLP0-223	ENST00000551783	RIMS2	Q9UQ26	1411 aa		29.54	■■■□□ 2.32
RPLP0-223	ENST00000551783	CHGA	P10645	457 aa	Known RBP	29.52	■■■□□ 2.32
RPLP0-223	ENST00000551783	RBM33	Q96EV2	1170 aa	Known RBP	29.51	■■■□□ 2.31
RPLP0-223	ENST00000551783	NWD1	Q149M9	1564 aa		29.51	■■■□□ 2.31
RPLP0-223	ENST00000551783	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.5	■■■□□ 2.31
RPLP0-223	ENST00000551783	CHD2	O14647	1828 aa	Known RBP	29.48	■■■□□ 2.31
RPLP0-223	ENST00000551783	NAIP	Q13075	1403 aa		29.48	■■■□□ 2.31
RPLP0-223	ENST00000551783	BCAN	Q96GW7	911 aa		29.47	■■■□□ 2.31
RPLP0-223	ENST00000551783	TMEM94	Q12767	1356 aa		29.45	■■■□□ 2.31
RPLP0-223	ENST00000551783	PLEKHG1	Q9ULL1	1385 aa		29.45	■■■□□ 2.31
RPLP0-223	ENST00000551783	KCNA6	P17658	529 aa		29.44	■■■□□ 2.3
RPLP0-223	ENST00000551783	MED1	Q15648	1581 aa	Predicted RBP	29.43	■■■□□ 2.3
RPLP0-223	ENST00000551783	PPP1R15A	O75807	674 aa	Predicted RBP	29.42	■■■□□ 2.3
RPLP0-223	ENST00000551783	CLTCL1	P53675	1640 aa		29.41	■■■□□ 2.3
RPLP0-223	ENST00000551783	NKTR	P30414	1462 aa	Known RBP	29.39	■■■□□ 2.3
RPLP0-223	ENST00000551783	ADAMTS13	Q76LX8	1427 aa		29.38	■■■□□ 2.29
RPLP0-223	ENST00000551783	PROSER2	Q86WR7	435 aa	Predicted RBP	29.37	■■■□□ 2.29
RPLP0-223	ENST00000551783	NRXN3	Q9Y4C0	1643 aa		29.36	■■■□□ 2.29
RPLP0-223	ENST00000551783	HFM1	A2PYH4	1435 aa		29.34	■■■□□ 2.29
RPLP0-223	ENST00000551783	ROBO1	Q9Y6N7	1651 aa		29.34	■■■□□ 2.29
RPLP0-223	ENST00000551783	TRPM2	O94759	1503 aa		29.32	■■■□□ 2.28
RPLP0-223	ENST00000551783	KIF1B	O60333	1816 aa		29.31	■■■□□ 2.28
RPLP0-223	ENST00000551783	DIP2A	Q14689	1571 aa		29.3	■■■□□ 2.28
RPLP0-223	ENST00000551783	HDGF	P51858	240 aa	Known RBP	29.29	■■■□□ 2.28
RPLP0-223	ENST00000551783	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.29	■■■□□ 2.28
RPLP0-223	ENST00000551783	TBX22	Q9Y458	520 aa		29.28	■■■□□ 2.28
RPLP0-223	ENST00000551783	NEXMIF	Q5QGS0	1516 aa		29.26	■■■□□ 2.27
RPLP0-223	ENST00000551783	PTPRU	Q92729	1446 aa		29.26	■■■□□ 2.27
RPLP0-223	ENST00000551783	TRIM52	Q96A61	297 aa		29.25	■■■□□ 2.27
RPLP0-223	ENST00000551783	SETBP1	Q9Y6X0	1596 aa		29.23	■■■□□ 2.27
RPLP0-223	ENST00000551783	FAM135B	Q49AJ0	1406 aa		29.22	■■■□□ 2.27
RPLP0-223	ENST00000551783	ZNF326	Q5BKZ1	582 aa	Known RBP	29.22	■■■□□ 2.27
RPLP0-223	ENST00000551783	MSH6	P52701	1360 aa		29.22	■■■□□ 2.27
RPLP0-223	ENST00000551783	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.22	■■■□□ 2.27
RPLP0-223	ENST00000551783	XRN1	Q8IZH2	1706 aa	Known RBP	29.21	■■■□□ 2.27
RPLP0-223	ENST00000551783	SOCS7	O14512	581 aa		29.16	■■■□□ 2.26
RPLP0-223	ENST00000551783	FOXD1	Q16676	465 aa		29.16	■■■□□ 2.26
RPLP0-223	ENST00000551783	PIK3R4	Q99570	1358 aa		29.15	■■■□□ 2.26
RPLP0-223	ENST00000551783	PHLPP1	O60346	1717 aa		29.15	■■■□□ 2.26
RPLP0-223	ENST00000551783	SLC4A1AP	Q9BWU0	796 aa	Known RBP	29.15	■■■□□ 2.26
RPLP0-223	ENST00000551783	SETD1A	O15047	1707 aa	Known RBP	29.14	■■■□□ 2.26
RPLP0-223	ENST00000551783	AMOTL2	Q9Y2J4	779 aa		29.14	■■■□□ 2.26
RPLP0-223	ENST00000551783	MET	P08581	1390 aa		29.13	■■■□□ 2.25
RPLP0-223	ENST00000551783	PPL	O60437	1756 aa		29.12	■■■□□ 2.25
RPLP0-223	ENST00000551783	C14orf37	Q86TY3	774 aa		29.11	■■■□□ 2.25
RPLP0-223	ENST00000551783	SLAIN2	Q9P270	581 aa		29.11	■■■□□ 2.25
RPLP0-223	ENST00000551783	PHF23	Q9BUL5	403 aa	Predicted RBP	29.07	■■■□□ 2.24
RPLP0-223	ENST00000551783	NCOA3	Q9Y6Q9	1424 aa		29.07	■■■□□ 2.24
RPLP0-223	ENST00000551783	NALCN	Q8IZF0	1738 aa		29.06	■■■□□ 2.24
RPLP0-223	ENST00000551783	COL16A1	Q07092	1604 aa	Predicted RBP	29.06	■■■□□ 2.24
RPLP0-223	ENST00000551783	C19orf44	Q9H6X5	657 aa		29	■■■□□ 2.23
RPLP0-223	ENST00000551783	RGS17	Q9UGC6	210 aa	Predicted RBP	29	■■■□□ 2.23
RPLP0-223	ENST00000551783	IFT172	Q9UG01	1749 aa		29	■■■□□ 2.23
RPLP0-223	ENST00000551783	ATF3	P18847	181 aa		28.97	■■■□□ 2.23
RPLP0-223	ENST00000551783	MPHOSPH9	Q99550	1183 aa		28.97	■■■□□ 2.23
RPLP0-223	ENST00000551783	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.96	■■■□□ 2.23
RPLP0-223	ENST00000551783	CADPS2	Q86UW7	1296 aa		28.96	■■■□□ 2.23
RPLP0-223	ENST00000551783	CCDC144A	A2RUR9	1427 aa		28.93	■■■□□ 2.22
RPLP0-223	ENST00000551783	MST1R	Q04912	1400 aa		28.93	■■■□□ 2.22
RPLP0-223	ENST00000551783	SPATA31E1	Q6ZUB1	1445 aa		28.92	■■■□□ 2.22
RPLP0-223	ENST00000551783	ADGRL3	Q9HAR2	1447 aa		28.92	■■■□□ 2.22
RPLP0-223	ENST00000551783	VGF	O15240	615 aa	Predicted RBP	28.91	■■■□□ 2.22
RPLP0-223	ENST00000551783	DCC	P43146	1447 aa		28.91	■■■□□ 2.22
RPLP0-223	ENST00000551783	ASXL1	Q8IXJ9	1541 aa		28.9	■■■□□ 2.22
RPLP0-223	ENST00000551783	BRINP3	Q76B58	766 aa		28.9	■■■□□ 2.22
RPLP0-223	ENST00000551783	SETD5	Q9C0A6	1442 aa		28.9	■■■□□ 2.22
RPLP0-223	ENST00000551783	NHSL1	Q5SYE7	1610 aa		28.9	■■■□□ 2.22
RPLP0-223	ENST00000551783	ROBO2	Q9HCK4	1378 aa		28.89	■■■□□ 2.22
RPLP0-223	ENST00000551783	RGL3	Q3MIN7	710 aa		28.89	■■■□□ 2.22
RPLP0-223	ENST00000551783	JCAD	Q9P266	1359 aa		28.88	■■■□□ 2.21
RPLP0-223	ENST00000551783	LRP6	O75581	1613 aa		28.88	■■■□□ 2.21
RPLP0-223	ENST00000551783	RPGRIP1L	Q68CZ1	1315 aa		28.88	■■■□□ 2.21
RPLP0-223	ENST00000551783	ADGRF5	Q8IZF2	1346 aa		28.88	■■■□□ 2.21
RPLP0-223	ENST00000551783	SHPRH	Q149N8	1683 aa		28.87	■■■□□ 2.21
RPLP0-223	ENST00000551783	RAB3GAP2	Q9H2M9	1393 aa		28.86	■■■□□ 2.21
RPLP0-223	ENST00000551783	PTCH1	Q13635	1447 aa		28.86	■■■□□ 2.21
RPLP0-223	ENST00000551783	DDX17	Q92841	729 aa	Known RBP	28.83	■■■□□ 2.21
RPLP0-223	ENST00000551783	POTEA	Q6S8J7	498 aa		28.82	■■■□□ 2.2
RPLP0-223	ENST00000551783	PRAG1	Q86YV5	1406 aa		28.79	■■■□□ 2.2
RPLP0-223	ENST00000551783	C1orf167	Q5SNV9	1468 aa		28.76	■■■□□ 2.19
RPLP0-223	ENST00000551783	PIK3C2G	O75747	1445 aa		28.75	■■■□□ 2.19
RPLP0-223	ENST00000551783	KNDC1	Q76NI1	1749 aa		28.74	■■■□□ 2.19
RPLP0-223	ENST00000551783	ANKRD30B	Q9BXX2	1392 aa		28.73	■■■□□ 2.19
RPLP0-223	ENST00000551783	TMEM132E	Q6IEE7	984 aa		28.72	■■■□□ 2.19
RPLP0-223	ENST00000551783	STK26	Q9P289	416 aa		28.72	■■■□□ 2.19
RPLP0-223	ENST00000551783	SPATA31A6	Q5VVP1	1343 aa		28.7	■■■□□ 2.19
RPLP0-223	ENST00000551783	LAMC1	P11047	1609 aa		28.7	■■■□□ 2.19
RPLP0-223	ENST00000551783	ORAI2	Q96SN7	254 aa		28.69	■■■□□ 2.18
RPLP0-223	ENST00000551783	PLEKHH1	Q9ULM0	1364 aa		28.69	■■■□□ 2.18
RPLP0-223	ENST00000551783	CDC42BPG	Q6DT37	1551 aa		28.68	■■■□□ 2.18
RPLP0-223	ENST00000551783	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.68	■■■□□ 2.18
RPLP0-223	ENST00000551783	NUTM2E	B1AL46	878 aa	Predicted RBP	28.68	■■■□□ 2.18
RPLP0-223	ENST00000551783	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.68	■■■□□ 2.18
RPLP0-223	ENST00000551783	WAPL	Q7Z5K2	1190 aa		28.67	■■■□□ 2.18
RPLP0-223	ENST00000551783	TECPR2	O15040	1411 aa		28.66	■■■□□ 2.18
RPLP0-223	ENST00000551783	NRXN1	Q9ULB1	1477 aa		28.66	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms