RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 RIMS2Q9UQ26 1411 aa14.77□□□□□ -0.04
GCN1-208ENST00000551549 PPP1R15AO75807 674 aaPredicted RBP14.77□□□□□ -0.05
GCN1-208ENST00000551549 NUTM2DQ5VT03 806 aaPredicted RBP14.77□□□□□ -0.05
GCN1-208ENST00000551549 GCC2Q8IWJ2 1684 aa14.77□□□□□ -0.05
GCN1-208ENST00000551549 RBM33Q96EV2 1170 aaKnown RBP14.76□□□□□ -0.05
GCN1-208ENST00000551549 E9PCH4 1651 aa14.76□□□□□ -0.05
GCN1-208ENST00000551549 NAIPQ13075 1403 aa14.75□□□□□ -0.05
GCN1-208ENST00000551549 HDGFP51858 240 aaKnown RBP14.75□□□□□ -0.05
GCN1-208ENST00000551549 ILDR2Q71H61 639 aa14.75□□□□□ -0.05
GCN1-208ENST00000551549 PLEKHG1Q9ULL1 1385 aa14.74□□□□□ -0.05
GCN1-208ENST00000551549 TMEM131LA2VDJ0 1609 aa14.74□□□□□ -0.05
GCN1-208ENST00000551549 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.74□□□□□ -0.05
GCN1-208ENST00000551549 TMEM94Q12767 1356 aa14.73□□□□□ -0.05
GCN1-208ENST00000551549 PROSER2Q86WR7 435 aaPredicted RBP14.73□□□□□ -0.05
GCN1-208ENST00000551549 MYO5BQ9ULV0 1848 aa14.71□□□□□ -0.06
GCN1-208ENST00000551549 TBX22Q9Y458 520 aa14.7□□□□□ -0.06
GCN1-208ENST00000551549 HFM1A2PYH4 1435 aa14.69□□□□□ -0.06
GCN1-208ENST00000551549 TRIM52Q96A61 297 aa14.69□□□□□ -0.06
GCN1-208ENST00000551549 ADAMTS13Q76LX8 1427 aa14.67□□□□□ -0.06
GCN1-208ENST00000551549 XIRP1Q702N8 1843 aaKnown RBP14.67□□□□□ -0.06
GCN1-208ENST00000551549 ZNF326Q5BKZ1 582 aaKnown RBP14.67□□□□□ -0.06
GCN1-208ENST00000551549 NWD1Q149M9 1564 aa14.66□□□□□ -0.06
GCN1-208ENST00000551549 NKTRP30414 1462 aaKnown RBP14.66□□□□□ -0.06
GCN1-208ENST00000551549 SLC4A1APQ9BWU0 796 aaKnown RBP14.64□□□□□ -0.07
GCN1-208ENST00000551549 FAM135BQ49AJ0 1406 aa14.64□□□□□ -0.07
GCN1-208ENST00000551549 SPHKAPQ2M3C7 1700 aa14.63□□□□□ -0.07
GCN1-208ENST00000551549 MSH6P52701 1360 aa14.62□□□□□ -0.07
GCN1-208ENST00000551549 AMOTL2Q9Y2J4 779 aa14.62□□□□□ -0.07
GCN1-208ENST00000551549 TRPM2O94759 1503 aa14.61□□□□□ -0.07
GCN1-208ENST00000551549 PTPRUQ92729 1446 aa14.61□□□□□ -0.07
GCN1-208ENST00000551549 FOXD1Q16676 465 aa14.61□□□□□ -0.07
GCN1-208ENST00000551549 SLAIN2Q9P270 581 aa14.61□□□□□ -0.07
GCN1-208ENST00000551549 CLTCL1P53675 1640 aa14.61□□□□□ -0.07
GCN1-208ENST00000551549 PIK3R4Q99570 1358 aa14.6□□□□□ -0.07
GCN1-208ENST00000551549 MED1Q15648 1581 aaPredicted RBP14.6□□□□□ -0.07
GCN1-208ENST00000551549 CHD2O14647 1828 aaKnown RBP14.6□□□□□ -0.07
GCN1-208ENST00000551549 SOCS7O14512 581 aa14.6□□□□□ -0.07
GCN1-208ENST00000551549 C14orf37Q86TY3 774 aa14.6□□□□□ -0.07
GCN1-208ENST00000551549 DIP2AQ14689 1571 aa14.59□□□□□ -0.07
GCN1-208ENST00000551549 METP08581 1390 aa14.59□□□□□ -0.07
GCN1-208ENST00000551549 NCOA3Q9Y6Q9 1424 aa14.58□□□□□ -0.08
GCN1-208ENST00000551549 C19orf44Q9H6X5 657 aa14.57□□□□□ -0.08
GCN1-208ENST00000551549 NEXMIFQ5QGS0 1516 aa14.56□□□□□ -0.08
GCN1-208ENST00000551549 SETBP1Q9Y6X0 1596 aa14.56□□□□□ -0.08
GCN1-208ENST00000551549 NRXN3Q9Y4C0 1643 aa14.56□□□□□ -0.08
GCN1-208ENST00000551549 MPHOSPH9Q99550 1183 aa14.56□□□□□ -0.08
GCN1-208ENST00000551549 PHF23Q9BUL5 403 aaPredicted RBP14.56□□□□□ -0.08
GCN1-208ENST00000551549 ATF3P18847 181 aa14.55□□□□□ -0.08
GCN1-208ENST00000551549 ROBO1Q9Y6N7 1651 aa14.55□□□□□ -0.08
GCN1-208ENST00000551549 CADPS2Q86UW7 1296 aa14.54□□□□□ -0.08
GCN1-208ENST00000551549 RPGRIP1LQ68CZ1 1315 aa14.53□□□□□ -0.08
GCN1-208ENST00000551549 VGFO15240 615 aaPredicted RBP14.53□□□□□ -0.08
GCN1-208ENST00000551549 KIF1BO60333 1816 aa14.5□□□□□ -0.09
GCN1-208ENST00000551549 RGL3Q3MIN7 710 aa14.5□□□□□ -0.09
GCN1-208ENST00000551549 RGS17Q9UGC6 210 aaPredicted RBP14.5□□□□□ -0.09
GCN1-208ENST00000551549 SETD5Q9C0A6 1442 aa14.49□□□□□ -0.09
GCN1-208ENST00000551549 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.49□□□□□ -0.09
GCN1-208ENST00000551549 XRN1Q8IZH2 1706 aaKnown RBP14.49□□□□□ -0.09
GCN1-208ENST00000551549 CCDC144AA2RUR9 1427 aa14.49□□□□□ -0.09
GCN1-208ENST00000551549 BRINP3Q76B58 766 aa14.48□□□□□ -0.09
GCN1-208ENST00000551549 ADGRF5Q8IZF2 1346 aa14.47□□□□□ -0.09
GCN1-208ENST00000551549 ROBO2Q9HCK4 1378 aa14.47□□□□□ -0.09
GCN1-208ENST00000551549 JCADQ9P266 1359 aa14.47□□□□□ -0.09
GCN1-208ENST00000551549 DCCP43146 1447 aa14.46□□□□□ -0.09
GCN1-208ENST00000551549 SPATA31E1Q6ZUB1 1445 aa14.46□□□□□ -0.09
GCN1-208ENST00000551549 PHLPP1O60346 1717 aa14.45□□□□□ -0.1
GCN1-208ENST00000551549 RAB3GAP2Q9H2M9 1393 aa14.45□□□□□ -0.1
GCN1-208ENST00000551549 MST1RQ04912 1400 aa14.44□□□□□ -0.1
GCN1-208ENST00000551549 ADGRL3Q9HAR2 1447 aa14.44□□□□□ -0.1
GCN1-208ENST00000551549 ACIN1Q9UKV3 1341 aaKnown RBP14.43□□□□□ -0.1
GCN1-208ENST00000551549 PTCH1Q13635 1447 aa14.42□□□□□ -0.1
GCN1-208ENST00000551549 COL16A1Q07092 1604 aaPredicted RBP14.42□□□□□ -0.1
GCN1-208ENST00000551549 POTEAQ6S8J7 498 aa14.42□□□□□ -0.1
GCN1-208ENST00000551549 DDX17Q92841 729 aaKnown RBP14.42□□□□□ -0.1
GCN1-208ENST00000551549 ANKRD30BQ9BXX2 1392 aa14.42□□□□□ -0.1
GCN1-208ENST00000551549 PPLO60437 1756 aa14.42□□□□□ -0.1
GCN1-208ENST00000551549 AHDC1Q5TGY3 1603 aaPredicted RBP14.41□□□□□ -0.1
GCN1-208ENST00000551549 SETD1AO15047 1707 aaKnown RBP14.41□□□□□ -0.1
GCN1-208ENST00000551549 STK26Q9P289 416 aa14.41□□□□□ -0.1
GCN1-208ENST00000551549 ASXL1Q8IXJ9 1541 aa14.41□□□□□ -0.1
GCN1-208ENST00000551549 TMEM132EQ6IEE7 984 aa14.4□□□□□ -0.1
GCN1-208ENST00000551549 PRAG1Q86YV5 1406 aa14.39□□□□□ -0.11
GCN1-208ENST00000551549 SPATA31A6Q5VVP1 1343 aa14.39□□□□□ -0.11
GCN1-208ENST00000551549 C1orf167Q5SNV9 1468 aa14.38□□□□□ -0.11
GCN1-208ENST00000551549 WAPLQ7Z5K2 1190 aa14.38□□□□□ -0.11
GCN1-208ENST00000551549 NALCNQ8IZF0 1738 aa14.38□□□□□ -0.11
GCN1-208ENST00000551549 LRP6O75581 1613 aa14.37□□□□□ -0.11
GCN1-208ENST00000551549 MEX3CQ5U5Q3 659 aaKnown RBP14.37□□□□□ -0.11
GCN1-208ENST00000551549 ORAI2Q96SN7 254 aa14.37□□□□□ -0.11
GCN1-208ENST00000551549 LRPPRCP42704 1394 aaKnown RBP14.36□□□□□ -0.11
GCN1-208ENST00000551549 PIK3C2GO75747 1445 aa14.36□□□□□ -0.11
GCN1-208ENST00000551549 NUTM2BA6NNL0 878 aaPredicted RBP14.36□□□□□ -0.11
GCN1-208ENST00000551549 NUTM2EB1AL46 878 aaPredicted RBP14.36□□□□□ -0.11
GCN1-208ENST00000551549 NUTM2AQ8IVF1 878 aaPredicted RBP14.36□□□□□ -0.11
GCN1-208ENST00000551549 LRRC59Q96AG4 307 aaKnown RBP14.35□□□□□ -0.11
GCN1-208ENST00000551549 ABCC11Q96J66 1382 aa14.34□□□□□ -0.11
GCN1-208ENST00000551549 PLEKHH1Q9ULM0 1364 aa14.34□□□□□ -0.11
GCN1-208ENST00000551549 HRCP23327 699 aa14.34□□□□□ -0.11
GCN1-208ENST00000551549 CFAP70Q5T0N1 1121 aa14.34□□□□□ -0.11
GCN1-208ENST00000551549 C14orf93Q9H972 538 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms