RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 PLEKHG1Q9ULL1 1385 aa29.63■■■□□ 2.33
ATF1-202ENST00000549612 KCNA6P17658 529 aa29.61■■■□□ 2.33
ATF1-202ENST00000549612 HDGFP51858 240 aaKnown RBP29.61■■■□□ 2.33
ATF1-202ENST00000549612 DISP3Q9P2K9 1392 aa29.6■■■□□ 2.33
ATF1-202ENST00000549612 HFM1A2PYH4 1435 aa29.58■■■□□ 2.33
ATF1-202ENST00000549612 CHGAP10645 457 aaKnown RBP29.58■■■□□ 2.33
ATF1-202ENST00000549612 HSPA1LP34931 641 aa29.58■■■□□ 2.33
ATF1-202ENST00000549612 NWD1Q149M9 1564 aa29.57■■■□□ 2.32
ATF1-202ENST00000549612 PPP1R15AO75807 674 aaPredicted RBP29.57■■■□□ 2.32
ATF1-202ENST00000549612 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.57■■■□□ 2.32
ATF1-202ENST00000549612 XIRP1Q702N8 1843 aaKnown RBP29.56■■■□□ 2.32
ATF1-202ENST00000549612 BCANQ96GW7 911 aa29.55■■■□□ 2.32
ATF1-202ENST00000549612 NKTRP30414 1462 aaKnown RBP29.55■■■□□ 2.32
ATF1-202ENST00000549612 SPHKAPQ2M3C7 1700 aa29.54■■■□□ 2.32
ATF1-202ENST00000549612 TMEM94Q12767 1356 aa29.53■■■□□ 2.32
ATF1-202ENST00000549612 TBX22Q9Y458 520 aa29.49■■■□□ 2.31
ATF1-202ENST00000549612 ADAMTS13Q76LX8 1427 aa29.48■■■□□ 2.31
ATF1-202ENST00000549612 PROSER2Q86WR7 435 aaPredicted RBP29.48■■■□□ 2.31
ATF1-202ENST00000549612 SENP3Q9H4L4 574 aaPredicted RBP29.47■■■□□ 2.31
ATF1-202ENST00000549612 DIP2AQ14689 1571 aa29.47■■■□□ 2.31
ATF1-202ENST00000549612 TRPM2O94759 1503 aa29.46■■■□□ 2.31
ATF1-202ENST00000549612 NUTM2DQ5VT03 806 aaPredicted RBP29.46■■■□□ 2.31
ATF1-202ENST00000549612 CHD2O14647 1828 aaKnown RBP29.44■■■□□ 2.3
ATF1-202ENST00000549612 CLTCL1P53675 1640 aa29.42■■■□□ 2.3
ATF1-202ENST00000549612 PIK3R4Q99570 1358 aa29.41■■■□□ 2.3
ATF1-202ENST00000549612 TRIM52Q96A61 297 aa29.4■■■□□ 2.3
ATF1-202ENST00000549612 RBM33Q96EV2 1170 aaKnown RBP29.4■■■□□ 2.3
ATF1-202ENST00000549612 ILDR2Q71H61 639 aa29.39■■■□□ 2.3
ATF1-202ENST00000549612 FAM135BQ49AJ0 1406 aa29.38■■■□□ 2.29
ATF1-202ENST00000549612 SETBP1Q9Y6X0 1596 aa29.35■■■□□ 2.29
ATF1-202ENST00000549612 ZNF326Q5BKZ1 582 aaKnown RBP29.35■■■□□ 2.29
ATF1-202ENST00000549612 MSH6P52701 1360 aa29.35■■■□□ 2.29
ATF1-202ENST00000549612 NCOA3Q9Y6Q9 1424 aa29.35■■■□□ 2.29
ATF1-202ENST00000549612 MED1Q15648 1581 aaPredicted RBP29.35■■■□□ 2.29
ATF1-202ENST00000549612 SLC4A1APQ9BWU0 796 aaKnown RBP29.34■■■□□ 2.29
ATF1-202ENST00000549612 NRXN3Q9Y4C0 1643 aa29.34■■■□□ 2.29
ATF1-202ENST00000549612 NEXMIFQ5QGS0 1516 aa29.32■■■□□ 2.28
ATF1-202ENST00000549612 PTPRUQ92729 1446 aa29.29■■■□□ 2.28
ATF1-202ENST00000549612 KIF1BO60333 1816 aa29.29■■■□□ 2.28
ATF1-202ENST00000549612 ROBO1Q9Y6N7 1651 aa29.27■■■□□ 2.28
ATF1-202ENST00000549612 AMOTL2Q9Y2J4 779 aa29.26■■■□□ 2.27
ATF1-202ENST00000549612 SLAIN2Q9P270 581 aa29.24■■■□□ 2.27
ATF1-202ENST00000549612 XRN1Q8IZH2 1706 aaKnown RBP29.23■■■□□ 2.27
ATF1-202ENST00000549612 METP08581 1390 aa29.22■■■□□ 2.27
ATF1-202ENST00000549612 C14orf37Q86TY3 774 aa29.2■■■□□ 2.26
ATF1-202ENST00000549612 RPGRIP1LQ68CZ1 1315 aa29.2■■■□□ 2.26
ATF1-202ENST00000549612 C19orf44Q9H6X5 657 aa29.19■■■□□ 2.26
ATF1-202ENST00000549612 FOXD1Q16676 465 aa29.18■■■□□ 2.26
ATF1-202ENST00000549612 SOCS7O14512 581 aa29.17■■■□□ 2.26
ATF1-202ENST00000549612 VGFO15240 615 aaPredicted RBP29.17■■■□□ 2.26
ATF1-202ENST00000549612 MPHOSPH9Q99550 1183 aa29.17■■■□□ 2.26
ATF1-202ENST00000549612 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.17■■■□□ 2.26
ATF1-202ENST00000549612 CADPS2Q86UW7 1296 aa29.16■■■□□ 2.26
ATF1-202ENST00000549612 ACIN1Q9UKV3 1341 aaKnown RBP29.16■■■□□ 2.26
ATF1-202ENST00000549612 SETD5Q9C0A6 1442 aa29.14■■■□□ 2.26
ATF1-202ENST00000549612 CCDC144AA2RUR9 1427 aa29.13■■■□□ 2.25
ATF1-202ENST00000549612 DCCP43146 1447 aa29.13■■■□□ 2.25
ATF1-202ENST00000549612 ATF3P18847 181 aa29.13■■■□□ 2.25
ATF1-202ENST00000549612 PPLO60437 1756 aa29.11■■■□□ 2.25
ATF1-202ENST00000549612 PHF23Q9BUL5 403 aaPredicted RBP29.1■■■□□ 2.25
ATF1-202ENST00000549612 SETD1AO15047 1707 aaKnown RBP29.09■■■□□ 2.25
ATF1-202ENST00000549612 SPATA31E1Q6ZUB1 1445 aa29.08■■■□□ 2.25
ATF1-202ENST00000549612 PHLPP1O60346 1717 aa29.07■■■□□ 2.24
ATF1-202ENST00000549612 PTCH1Q13635 1447 aa29.05■■■□□ 2.24
ATF1-202ENST00000549612 PRAG1Q86YV5 1406 aa29.05■■■□□ 2.24
ATF1-202ENST00000549612 ADGRL3Q9HAR2 1447 aa29.04■■■□□ 2.24
ATF1-202ENST00000549612 COL16A1Q07092 1604 aaPredicted RBP29.03■■■□□ 2.24
ATF1-202ENST00000549612 RAB3GAP2Q9H2M9 1393 aa29.02■■■□□ 2.24
ATF1-202ENST00000549612 AHDC1Q5TGY3 1603 aaPredicted RBP29.02■■■□□ 2.24
ATF1-202ENST00000549612 JCADQ9P266 1359 aa29.01■■■□□ 2.24
ATF1-202ENST00000549612 MST1RQ04912 1400 aa29.01■■■□□ 2.23
ATF1-202ENST00000549612 ANKRD30BQ9BXX2 1392 aa29■■■□□ 2.23
ATF1-202ENST00000549612 BRINP3Q76B58 766 aa28.99■■■□□ 2.23
ATF1-202ENST00000549612 ROBO2Q9HCK4 1378 aa28.99■■■□□ 2.23
ATF1-202ENST00000549612 ADGRF5Q8IZF2 1346 aa28.98■■■□□ 2.23
ATF1-202ENST00000549612 NALCNQ8IZF0 1738 aa28.98■■■□□ 2.23
ATF1-202ENST00000549612 RGL3Q3MIN7 710 aa28.98■■■□□ 2.23
ATF1-202ENST00000549612 IFT172Q9UG01 1749 aa28.97■■■□□ 2.23
ATF1-202ENST00000549612 ASXL1Q8IXJ9 1541 aa28.95■■■□□ 2.23
ATF1-202ENST00000549612 RGS17Q9UGC6 210 aaPredicted RBP28.95■■■□□ 2.22
ATF1-202ENST00000549612 PIK3C2GO75747 1445 aa28.91■■■□□ 2.22
ATF1-202ENST00000549612 SPATA31A6Q5VVP1 1343 aa28.88■■■□□ 2.21
ATF1-202ENST00000549612 NHSL1Q5SYE7 1610 aa28.87■■■□□ 2.21
ATF1-202ENST00000549612 SHPRHQ149N8 1683 aa28.86■■■□□ 2.21
ATF1-202ENST00000549612 TECPR2O15040 1411 aa28.86■■■□□ 2.21
ATF1-202ENST00000549612 C1orf167Q5SNV9 1468 aa28.86■■■□□ 2.21
ATF1-202ENST00000549612 HRCP23327 699 aa28.86■■■□□ 2.21
ATF1-202ENST00000549612 LRPPRCP42704 1394 aaKnown RBP28.85■■■□□ 2.21
ATF1-202ENST00000549612 MYOM2P54296 1465 aa28.84■■■□□ 2.21
ATF1-202ENST00000549612 NRXN1Q9ULB1 1477 aa28.84■■■□□ 2.21
ATF1-202ENST00000549612 LRP6O75581 1613 aa28.83■■■□□ 2.21
ATF1-202ENST00000549612 ABCC11Q96J66 1382 aa28.81■■■□□ 2.2
ATF1-202ENST00000549612 CDC42BPGQ6DT37 1551 aa28.79■■■□□ 2.2
ATF1-202ENST00000549612 KNDC1Q76NI1 1749 aa28.78■■■□□ 2.2
ATF1-202ENST00000549612 TMEM132EQ6IEE7 984 aa28.78■■■□□ 2.2
ATF1-202ENST00000549612 POTEAQ6S8J7 498 aa28.78■■■□□ 2.2
ATF1-202ENST00000549612 STK26Q9P289 416 aa28.78■■■□□ 2.2
ATF1-202ENST00000549612 LAMC1P11047 1609 aa28.77■■■□□ 2.2
ATF1-202ENST00000549612 C14orf93Q9H972 538 aaKnown RBP28.77■■■□□ 2.2
ATF1-202ENST00000549612 YTHDC2Q9H6S0 1430 aaKnown RBP28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms