RNA–Protein interactions for RNA: ENST00000548620.1

USP15-209, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-209ENST00000548620 AK7Q96M32 723 aa12.43□□□□□ -0.42
USP15-209ENST00000548620 PLSCR2Q9NRY7 297 aa12.43□□□□□ -0.42
USP15-209ENST00000548620 HDGFP51858 240 aaKnown RBP12.42□□□□□ -0.42
USP15-209ENST00000548620 TRIM66O15016 1216 aa12.39□□□□□ -0.43
USP15-209ENST00000548620 AMHR2Q16671 573 aa12.38□□□□□ -0.43
USP15-209ENST00000548620 DAXXQ9UER7 740 aaPredicted RBP12.38□□□□□ -0.43
USP15-209ENST00000548620 HPS5Q9UPZ3 1129 aa12.38□□□□□ -0.43
USP15-209ENST00000548620 PTPN5P54829 565 aa12.37□□□□□ -0.43
USP15-209ENST00000548620 MDM2Q00987 491 aaPredicted RBP12.37□□□□□ -0.43
USP15-209ENST00000548620 SLF2Q8IX21 1173 aa12.37□□□□□ -0.43
USP15-209ENST00000548620 TSR3Q9UJK0 312 aaKnown RBP12.37□□□□□ -0.43
USP15-209ENST00000548620 RNF40O75150 1001 aa12.36□□□□□ -0.43
USP15-209ENST00000548620 PRKCSHP14314 528 aaPredicted RBP12.35□□□□□ -0.43
USP15-209ENST00000548620 TMUB1Q9BVT8 246 aa12.35□□□□□ -0.43
USP15-209ENST00000548620 WBP1LQ9NX94 342 aa12.35□□□□□ -0.43
USP15-209ENST00000548620 HCSTQ9UBK5 93 aa12.35□□□□□ -0.43
USP15-209ENST00000548620 REPIN1Q9BWE0 567 aaKnown RBP12.34□□□□□ -0.43
USP15-209ENST00000548620 CLCN1P35523 988 aa12.33□□□□□ -0.44
USP15-209ENST00000548620 SLC4A3P48751 1232 aa12.33□□□□□ -0.44
USP15-209ENST00000548620 PPP4CP60510 307 aa12.33□□□□□ -0.44
USP15-209ENST00000548620 GPCPD1Q9NPB8 672 aa12.33□□□□□ -0.44
USP15-209ENST00000548620 SLC10A3P09131 477 aa12.32□□□□□ -0.44
USP15-209ENST00000548620 PDE4DQ08499 809 aa12.3□□□□□ -0.44
USP15-209ENST00000548620 TTLL12Q14166 644 aaPredicted RBP12.3□□□□□ -0.44
USP15-209ENST00000548620 PARP9Q8IXQ6 854 aa12.3□□□□□ -0.44
USP15-209ENST00000548620 NECTIN2Q92692 538 aa12.3□□□□□ -0.44
USP15-209ENST00000548620 DDX11L8A8MPP1 907 aa12.29□□□□□ -0.44
USP15-209ENST00000548620 SULF1Q8IWU6 871 aa12.29□□□□□ -0.44
USP15-209ENST00000548620 NYAP1Q6ZVC0 841 aa12.28□□□□□ -0.44
USP15-209ENST00000548620 FAM217BQ9NTX9 383 aaPredicted RBP12.28□□□□□ -0.44
USP15-209ENST00000548620 GIGYF2Q6Y7W6 1299 aaKnown RBP12.27□□□□□ -0.45
USP15-209ENST00000548620 APLP1P51693 650 aa12.26□□□□□ -0.45
USP15-209ENST00000548620 RDH13Q8NBN7 331 aa12.26□□□□□ -0.45
USP15-209ENST00000548620 CFHP08603 1231 aa12.25□□□□□ -0.45
USP15-209ENST00000548620 CD46P15529 392 aa12.25□□□□□ -0.45
USP15-209ENST00000548620 RSPH4AQ5TD94 716 aa12.24□□□□□ -0.45
USP15-209ENST00000548620 SSTR3P32745 418 aaPredicted RBP12.22□□□□□ -0.45
USP15-209ENST00000548620 KMT5BQ4FZB7 885 aa12.21□□□□□ -0.45
USP15-209ENST00000548620 PRR14Q9BWN1 585 aa12.21□□□□□ -0.45
USP15-209ENST00000548620 MS4A1P11836 297 aa12.2□□□□□ -0.46
USP15-209ENST00000548620 GCGRP47871 477 aa12.2□□□□□ -0.46
USP15-209ENST00000548620 ACTN4O43707 911 aaKnown RBP12.19□□□□□ -0.46
USP15-209ENST00000548620 GPBP1L1Q9HC44 474 aaPredicted RBP12.18□□□□□ -0.46
USP15-209ENST00000548620 KDM4CQ9H3R0 1056 aa12.15□□□□□ -0.46
USP15-209ENST00000548620 PCDHB3Q9Y5E6 796 aa12.14□□□□□ -0.47
USP15-209ENST00000548620 BRPF1P55201 1214 aaPredicted RBP12.13□□□□□ -0.47
USP15-209ENST00000548620 FUT2Q10981 343 aa12.13□□□□□ -0.47
USP15-209ENST00000548620 BEGAINQ9BUH8 593 aa12.13□□□□□ -0.47
USP15-209ENST00000548620 KDM4AO75164 1064 aa12.12□□□□□ -0.47
USP15-209ENST00000548620 ITGBL1O95965 494 aaPredicted RBP12.12□□□□□ -0.47
USP15-209ENST00000548620 NEUROD2Q15784 382 aa12.12□□□□□ -0.47
USP15-209ENST00000548620 TJAP1Q5JTD0 557 aa12.12□□□□□ -0.47
USP15-209ENST00000548620 MTRQ99707 1265 aa12.12□□□□□ -0.47
USP15-209ENST00000548620 BLOC1S3Q6QNY0 202 aa12.11□□□□□ -0.47
USP15-209ENST00000548620 COPS2P61201 443 aa12.1□□□□□ -0.47
USP15-209ENST00000548620 PUS10Q3MIT2 529 aaKnown RBP12.1□□□□□ -0.47
USP15-209ENST00000548620 ATP6V1AP38606 617 aa12.09□□□□□ -0.47
USP15-209ENST00000548620 USP46P62068 366 aa12.08□□□□□ -0.48
USP15-209ENST00000548620 MORN1Q5T089 497 aa12.08□□□□□ -0.48
USP15-209ENST00000548620 NUTM1Q86Y26 1132 aa12.08□□□□□ -0.48
USP15-209ENST00000548620 SPIRE2Q8WWL2 714 aa12.08□□□□□ -0.48
USP15-209ENST00000548620 IL21Q9HBE4 155 aa12.08□□□□□ -0.48
USP15-209ENST00000548620 PLA2G2EQ9NZK7 142 aa12.07□□□□□ -0.48
USP15-209ENST00000548620 HOXA2O43364 376 aa12.06□□□□□ -0.48
USP15-209ENST00000548620 ZNF516Q92618 1163 aa12.06□□□□□ -0.48
USP15-209ENST00000548620 FAM117AQ9C073 453 aa12.06□□□□□ -0.48
USP15-209ENST00000548620 KCNC4Q03721 635 aa12.05□□□□□ -0.48
USP15-209ENST00000548620 GRIPAP1Q4V328 841 aa12.05□□□□□ -0.48
USP15-209ENST00000548620 HLA-CQ95604 372 aa12.05□□□□□ -0.48
USP15-209ENST00000548620 ZPR1O75312 459 aa12.04□□□□□ -0.48
USP15-209ENST00000548620 TBC1D2Q9BYX2 928 aa12.04□□□□□ -0.48
USP15-209ENST00000548620 NR1I2O75469 434 aa12.03□□□□□ -0.48
USP15-209ENST00000548620 IFFO2Q5TF58 517 aa12.03□□□□□ -0.48
USP15-209ENST00000548620 SCUBE3Q8IX30 993 aa12.03□□□□□ -0.48
USP15-209ENST00000548620 SLC27A5Q9Y2P5 690 aa12.03□□□□□ -0.48
USP15-209ENST00000548620 DDRGK1Q96HY6 314 aa12.02□□□□□ -0.49
USP15-209ENST00000548620 PLEKHG3A1L390 1219 aa12.01□□□□□ -0.49
USP15-209ENST00000548620 MOXD2PA6NHM9 499 aa12.01□□□□□ -0.49
USP15-209ENST00000548620 DIXDC1Q155Q3 683 aa12.01□□□□□ -0.49
USP15-209ENST00000548620 GUCA2AQ02747 115 aa12□□□□□ -0.49
USP15-209ENST00000548620 TLL1O43897 1013 aa11.99□□□□□ -0.49
USP15-209ENST00000548620 NDUFV2P19404 249 aa11.99□□□□□ -0.49
USP15-209ENST00000548620 NKX2-3Q8TAU0 364 aa11.99□□□□□ -0.49
USP15-209ENST00000548620 MYSM1Q5VVJ2 828 aa11.98□□□□□ -0.49
USP15-209ENST00000548620 THAP11Q96EK4 314 aa11.98□□□□□ -0.49
USP15-209ENST00000548620 FDX1P10109 184 aa11.97□□□□□ -0.49
USP15-209ENST00000548620 RSBN1LQ6PCB5 846 aaPredicted RBP11.96□□□□□ -0.49
USP15-209ENST00000548620 RNF19BQ6ZMZ0 732 aa11.96□□□□□ -0.49
USP15-209ENST00000548620 PCDHGC3Q9UN70 934 aa11.96□□□□□ -0.49
USP15-209ENST00000548620 SALL2Q9Y467 1007 aaPredicted RBP11.96□□□□□ -0.49
USP15-209ENST00000548620 GJA5P36382 358 aa11.95□□□□□ -0.5
USP15-209ENST00000548620 SPTLC1O15269 473 aa11.94□□□□□ -0.5
USP15-209ENST00000548620 FMNL1O95466 1100 aaPredicted RBP11.94□□□□□ -0.5
USP15-209ENST00000548620 ADH1BP00325 375 aa11.94□□□□□ -0.5
USP15-209ENST00000548620 BRICD5Q6PL45 260 aa11.94□□□□□ -0.5
USP15-209ENST00000548620 IL27Q8NEV9 243 aa11.94□□□□□ -0.5
USP15-209ENST00000548620 RSPH6AQ9H0K4 717 aa11.94□□□□□ -0.5
USP15-209ENST00000548620 Q3C1V9 767 aa11.93□□□□□ -0.5
USP15-209ENST00000548620 RIC3Q7Z5B4 369 aa11.93□□□□□ -0.5
USP15-209ENST00000548620 SPSB2Q99619 263 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms