RNA–Protein interactions for RNA: ENST00000548311.5

TROAP-207, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-207ENST00000548311 RIMS2Q9UQ26 1411 aa23.17■■□□□ 1.3
TROAP-207ENST00000548311 TMEM131LA2VDJ0 1609 aa23.17■■□□□ 1.3
TROAP-207ENST00000548311 HSPA1LP34931 641 aa23.16■■□□□ 1.3
TROAP-207ENST00000548311 ZFYVE9O95405 1425 aa23.16■■□□□ 1.3
TROAP-207ENST00000548311 HDGFP51858 240 aaKnown RBP23.15■■□□□ 1.3
TROAP-207ENST00000548311 ALKQ9UM73 1620 aa23.14■■□□□ 1.29
TROAP-207ENST00000548311 KCNA6P17658 529 aa23.13■■□□□ 1.29
TROAP-207ENST00000548311 NAIPQ13075 1403 aa23.13■■□□□ 1.29
TROAP-207ENST00000548311 NUTM2DQ5VT03 806 aaPredicted RBP23.12■■□□□ 1.29
TROAP-207ENST00000548311 PLEKHG1Q9ULL1 1385 aa23.12■■□□□ 1.29
TROAP-207ENST00000548311 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.11■■□□□ 1.29
TROAP-207ENST00000548311 PROSER2Q86WR7 435 aaPredicted RBP23.09■■□□□ 1.29
TROAP-207ENST00000548311 XIRP1Q702N8 1843 aaKnown RBP23.09■■□□□ 1.29
TROAP-207ENST00000548311 TMEM94Q12767 1356 aa23.09■■□□□ 1.29
TROAP-207ENST00000548311 SPHKAPQ2M3C7 1700 aa23.08■■□□□ 1.29
TROAP-207ENST00000548311 TRIM52Q96A61 297 aa23.08■■□□□ 1.29
TROAP-207ENST00000548311 RBM33Q96EV2 1170 aaKnown RBP23.08■■□□□ 1.29
TROAP-207ENST00000548311 HFM1A2PYH4 1435 aa23.05■■□□□ 1.28
TROAP-207ENST00000548311 NWD1Q149M9 1564 aa23.05■■□□□ 1.28
TROAP-207ENST00000548311 NKTRP30414 1462 aaKnown RBP23.05■■□□□ 1.28
TROAP-207ENST00000548311 ZNF326Q5BKZ1 582 aaKnown RBP23.03■■□□□ 1.28
TROAP-207ENST00000548311 ILDR2Q71H61 639 aa23.02■■□□□ 1.28
TROAP-207ENST00000548311 TBX22Q9Y458 520 aa23.01■■□□□ 1.27
TROAP-207ENST00000548311 CHD2O14647 1828 aaKnown RBP22.99■■□□□ 1.27
TROAP-207ENST00000548311 ADAMTS13Q76LX8 1427 aa22.99■■□□□ 1.27
TROAP-207ENST00000548311 CLTCL1P53675 1640 aa22.98■■□□□ 1.27
TROAP-207ENST00000548311 TRPM2O94759 1503 aa22.98■■□□□ 1.27
TROAP-207ENST00000548311 DIP2AQ14689 1571 aa22.97■■□□□ 1.27
TROAP-207ENST00000548311 SLC4A1APQ9BWU0 796 aaKnown RBP22.97■■□□□ 1.27
TROAP-207ENST00000548311 MSH6P52701 1360 aa22.97■■□□□ 1.27
TROAP-207ENST00000548311 MED1Q15648 1581 aaPredicted RBP22.95■■□□□ 1.26
TROAP-207ENST00000548311 C14orf37Q86TY3 774 aa22.94■■□□□ 1.26
TROAP-207ENST00000548311 KIF1BO60333 1816 aa22.92■■□□□ 1.26
TROAP-207ENST00000548311 FAM135BQ49AJ0 1406 aa22.91■■□□□ 1.26
TROAP-207ENST00000548311 PIK3R4Q99570 1358 aa22.91■■□□□ 1.26
TROAP-207ENST00000548311 AMOTL2Q9Y2J4 779 aa22.89■■□□□ 1.25
TROAP-207ENST00000548311 ROBO1Q9Y6N7 1651 aa22.89■■□□□ 1.25
TROAP-207ENST00000548311 NRXN3Q9Y4C0 1643 aa22.88■■□□□ 1.25
TROAP-207ENST00000548311 SETBP1Q9Y6X0 1596 aa22.88■■□□□ 1.25
TROAP-207ENST00000548311 NEXMIFQ5QGS0 1516 aa22.87■■□□□ 1.25
TROAP-207ENST00000548311 FOXD1Q16676 465 aa22.87■■□□□ 1.25
TROAP-207ENST00000548311 PHF23Q9BUL5 403 aaPredicted RBP22.87■■□□□ 1.25
TROAP-207ENST00000548311 PTPRUQ92729 1446 aa22.87■■□□□ 1.25
TROAP-207ENST00000548311 SLAIN2Q9P270 581 aa22.86■■□□□ 1.25
TROAP-207ENST00000548311 NCOA3Q9Y6Q9 1424 aa22.84■■□□□ 1.25
TROAP-207ENST00000548311 METP08581 1390 aa22.82■■□□□ 1.24
TROAP-207ENST00000548311 SOCS7O14512 581 aa22.82■■□□□ 1.24
TROAP-207ENST00000548311 ATF3P18847 181 aa22.82■■□□□ 1.24
TROAP-207ENST00000548311 C19orf44Q9H6X5 657 aa22.81■■□□□ 1.24
TROAP-207ENST00000548311 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.8■■□□□ 1.24
TROAP-207ENST00000548311 CADPS2Q86UW7 1296 aa22.8■■□□□ 1.24
TROAP-207ENST00000548311 XRN1Q8IZH2 1706 aaKnown RBP22.79■■□□□ 1.24
TROAP-207ENST00000548311 VGFO15240 615 aaPredicted RBP22.79■■□□□ 1.24
TROAP-207ENST00000548311 MPHOSPH9Q99550 1183 aa22.79■■□□□ 1.24
TROAP-207ENST00000548311 CCDC144AA2RUR9 1427 aa22.77■■□□□ 1.24
TROAP-207ENST00000548311 RPGRIP1LQ68CZ1 1315 aa22.77■■□□□ 1.24
TROAP-207ENST00000548311 PHLPP1O60346 1717 aa22.77■■□□□ 1.23
TROAP-207ENST00000548311 SETD5Q9C0A6 1442 aa22.75■■□□□ 1.23
TROAP-207ENST00000548311 RGL3Q3MIN7 710 aa22.73■■□□□ 1.23
TROAP-207ENST00000548311 PPLO60437 1756 aa22.73■■□□□ 1.23
TROAP-207ENST00000548311 DCCP43146 1447 aa22.7■■□□□ 1.22
TROAP-207ENST00000548311 ACIN1Q9UKV3 1341 aaKnown RBP22.69■■□□□ 1.22
TROAP-207ENST00000548311 SETD1AO15047 1707 aaKnown RBP22.68■■□□□ 1.22
TROAP-207ENST00000548311 RAB3GAP2Q9H2M9 1393 aa22.68■■□□□ 1.22
TROAP-207ENST00000548311 ADGRL3Q9HAR2 1447 aa22.67■■□□□ 1.22
TROAP-207ENST00000548311 JCADQ9P266 1359 aa22.67■■□□□ 1.22
TROAP-207ENST00000548311 BRINP3Q76B58 766 aa22.66■■□□□ 1.22
TROAP-207ENST00000548311 COL16A1Q07092 1604 aaPredicted RBP22.66■■□□□ 1.22
TROAP-207ENST00000548311 SPATA31E1Q6ZUB1 1445 aa22.65■■□□□ 1.22
TROAP-207ENST00000548311 ADGRF5Q8IZF2 1346 aa22.65■■□□□ 1.22
TROAP-207ENST00000548311 NALCNQ8IZF0 1738 aa22.65■■□□□ 1.22
TROAP-207ENST00000548311 PTCH1Q13635 1447 aa22.65■■□□□ 1.22
TROAP-207ENST00000548311 ROBO2Q9HCK4 1378 aa22.64■■□□□ 1.22
TROAP-207ENST00000548311 MST1RQ04912 1400 aa22.64■■□□□ 1.21
TROAP-207ENST00000548311 AHDC1Q5TGY3 1603 aaPredicted RBP22.64■■□□□ 1.21
TROAP-207ENST00000548311 ANKRD30BQ9BXX2 1392 aa22.63■■□□□ 1.21
TROAP-207ENST00000548311 RGS17Q9UGC6 210 aaPredicted RBP22.62■■□□□ 1.21
TROAP-207ENST00000548311 ASXL1Q8IXJ9 1541 aa22.62■■□□□ 1.21
TROAP-207ENST00000548311 IFT172Q9UG01 1749 aa22.6■■□□□ 1.21
TROAP-207ENST00000548311 STK26Q9P289 416 aa22.58■■□□□ 1.21
TROAP-207ENST00000548311 MEX3CQ5U5Q3 659 aaKnown RBP22.56■■□□□ 1.2
TROAP-207ENST00000548311 PRAG1Q86YV5 1406 aa22.56■■□□□ 1.2
TROAP-207ENST00000548311 DDX17Q92841 729 aaKnown RBP22.55■■□□□ 1.2
TROAP-207ENST00000548311 SPATA31A6Q5VVP1 1343 aa22.55■■□□□ 1.2
TROAP-207ENST00000548311 TMEM132EQ6IEE7 984 aa22.54■■□□□ 1.2
TROAP-207ENST00000548311 PIK3C2GO75747 1445 aa22.54■■□□□ 1.2
TROAP-207ENST00000548311 C1orf167Q5SNV9 1468 aa22.54■■□□□ 1.2
TROAP-207ENST00000548311 SHPRHQ149N8 1683 aa22.53■■□□□ 1.2
TROAP-207ENST00000548311 POTEAQ6S8J7 498 aa22.53■■□□□ 1.2
TROAP-207ENST00000548311 LRP6O75581 1613 aa22.53■■□□□ 1.2
TROAP-207ENST00000548311 NHSL1Q5SYE7 1610 aa22.53■■□□□ 1.2
TROAP-207ENST00000548311 NUTM2BA6NNL0 878 aaPredicted RBP22.52■■□□□ 1.2
TROAP-207ENST00000548311 NUTM2EB1AL46 878 aaPredicted RBP22.52■■□□□ 1.2
TROAP-207ENST00000548311 NUTM2AQ8IVF1 878 aaPredicted RBP22.52■■□□□ 1.2
TROAP-207ENST00000548311 LRPPRCP42704 1394 aaKnown RBP22.51■■□□□ 1.19
TROAP-207ENST00000548311 WAPLQ7Z5K2 1190 aa22.5■■□□□ 1.19
TROAP-207ENST00000548311 ORAI2Q96SN7 254 aa22.49■■□□□ 1.19
TROAP-207ENST00000548311 LRRC59Q96AG4 307 aaKnown RBP22.48■■□□□ 1.19
TROAP-207ENST00000548311 TECPR2O15040 1411 aa22.48■■□□□ 1.19
TROAP-207ENST00000548311 ABCC11Q96J66 1382 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms