RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 CHGAP10645 457 aaKnown RBP17.67■□□□□ 0.42
RAB5C-203ENST00000546881 GCC2Q8IWJ2 1684 aa17.66■□□□□ 0.42
RAB5C-203ENST00000546881 MYO5BQ9ULV0 1848 aa17.65■□□□□ 0.42
RAB5C-203ENST00000546881 FAM135BQ49AJ0 1406 aa17.64■□□□□ 0.42
RAB5C-203ENST00000546881 RIMS2Q9UQ26 1411 aa17.64■□□□□ 0.42
RAB5C-203ENST00000546881 ITGAEP38570 1179 aa17.64■□□□□ 0.41
RAB5C-203ENST00000546881 NKTRP30414 1462 aaKnown RBP17.63■□□□□ 0.41
RAB5C-203ENST00000546881 UNC13BO14795 1591 aa17.63■□□□□ 0.41
RAB5C-203ENST00000546881 NWD1Q149M9 1564 aa17.63■□□□□ 0.41
RAB5C-203ENST00000546881 HDGFP51858 240 aaKnown RBP17.63■□□□□ 0.41
RAB5C-203ENST00000546881 ROBO1Q9Y6N7 1651 aa17.62■□□□□ 0.41
RAB5C-203ENST00000546881 NUTM2DQ5VT03 806 aaPredicted RBP17.62■□□□□ 0.41
RAB5C-203ENST00000546881 MSH6P52701 1360 aa17.62■□□□□ 0.41
RAB5C-203ENST00000546881 PLEKHG1Q9ULL1 1385 aa17.62■□□□□ 0.41
RAB5C-203ENST00000546881 ZFYVE9O95405 1425 aa17.62■□□□□ 0.41
RAB5C-203ENST00000546881 TMEM131LA2VDJ0 1609 aa17.61■□□□□ 0.41
RAB5C-203ENST00000546881 PPARGC1BQ86YN6 1023 aaKnown RBP17.61■□□□□ 0.41
RAB5C-203ENST00000546881 E9PCH4 1651 aa17.6■□□□□ 0.41
RAB5C-203ENST00000546881 ROCK1Q13464 1354 aa17.58■□□□□ 0.4
RAB5C-203ENST00000546881 C14orf37Q86TY3 774 aa17.58■□□□□ 0.4
RAB5C-203ENST00000546881 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.58■□□□□ 0.4
RAB5C-203ENST00000546881 NUP155O75694 1391 aa17.57■□□□□ 0.4
RAB5C-203ENST00000546881 RGS17Q9UGC6 210 aaPredicted RBP17.57■□□□□ 0.4
RAB5C-203ENST00000546881 IQGAP3Q86VI3 1631 aa17.57■□□□□ 0.4
RAB5C-203ENST00000546881 CHD2O14647 1828 aaKnown RBP17.56■□□□□ 0.4
RAB5C-203ENST00000546881 SLAIN2Q9P270 581 aa17.56■□□□□ 0.4
RAB5C-203ENST00000546881 TBX22Q9Y458 520 aa17.55■□□□□ 0.4
RAB5C-203ENST00000546881 PHLPP1O60346 1717 aa17.53■□□□□ 0.4
RAB5C-203ENST00000546881 ADAMTS13Q76LX8 1427 aa17.51■□□□□ 0.39
RAB5C-203ENST00000546881 DIP2AQ14689 1571 aa17.5■□□□□ 0.39
RAB5C-203ENST00000546881 POTEAQ6S8J7 498 aa17.49■□□□□ 0.39
RAB5C-203ENST00000546881 ATF3P18847 181 aa17.48■□□□□ 0.39
RAB5C-203ENST00000546881 ZNF326Q5BKZ1 582 aaKnown RBP17.48■□□□□ 0.39
RAB5C-203ENST00000546881 JCADQ9P266 1359 aa17.48■□□□□ 0.39
RAB5C-203ENST00000546881 TRPM2O94759 1503 aa17.47■□□□□ 0.39
RAB5C-203ENST00000546881 AMOTL2Q9Y2J4 779 aa17.47■□□□□ 0.39
RAB5C-203ENST00000546881 PIK3R4Q99570 1358 aa17.47■□□□□ 0.39
RAB5C-203ENST00000546881 NCOA3Q9Y6Q9 1424 aa17.47■□□□□ 0.39
RAB5C-203ENST00000546881 CADPS2Q86UW7 1296 aa17.46■□□□□ 0.39
RAB5C-203ENST00000546881 C19orf44Q9H6X5 657 aa17.46■□□□□ 0.39
RAB5C-203ENST00000546881 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.46■□□□□ 0.39
RAB5C-203ENST00000546881 SPHKAPQ2M3C7 1700 aa17.45■□□□□ 0.38
RAB5C-203ENST00000546881 COL16A1Q07092 1604 aaPredicted RBP17.44■□□□□ 0.38
RAB5C-203ENST00000546881 PTPRUQ92729 1446 aa17.44■□□□□ 0.38
RAB5C-203ENST00000546881 MEX3CQ5U5Q3 659 aaKnown RBP17.43■□□□□ 0.38
RAB5C-203ENST00000546881 NRXN3Q9Y4C0 1643 aa17.4■□□□□ 0.38
RAB5C-203ENST00000546881 SETBP1Q9Y6X0 1596 aa17.39■□□□□ 0.37
RAB5C-203ENST00000546881 AHDC1Q5TGY3 1603 aaPredicted RBP17.39■□□□□ 0.37
RAB5C-203ENST00000546881 LRP6O75581 1613 aa17.38■□□□□ 0.37
RAB5C-203ENST00000546881 CLTCL1P53675 1640 aa17.38■□□□□ 0.37
RAB5C-203ENST00000546881 SPATA31A6Q5VVP1 1343 aa17.38■□□□□ 0.37
RAB5C-203ENST00000546881 BRINP3Q76B58 766 aa17.37■□□□□ 0.37
RAB5C-203ENST00000546881 SETD1AO15047 1707 aaKnown RBP17.37■□□□□ 0.37
RAB5C-203ENST00000546881 XRN1Q8IZH2 1706 aaKnown RBP17.37■□□□□ 0.37
RAB5C-203ENST00000546881 METP08581 1390 aa17.37■□□□□ 0.37
RAB5C-203ENST00000546881 NUTM2BA6NNL0 878 aaPredicted RBP17.36■□□□□ 0.37
RAB5C-203ENST00000546881 NUTM2EB1AL46 878 aaPredicted RBP17.36■□□□□ 0.37
RAB5C-203ENST00000546881 NUTM2AQ8IVF1 878 aaPredicted RBP17.36■□□□□ 0.37
RAB5C-203ENST00000546881 TRIM52Q96A61 297 aa17.36■□□□□ 0.37
RAB5C-203ENST00000546881 DCCP43146 1447 aa17.34■□□□□ 0.37
RAB5C-203ENST00000546881 NAIPQ13075 1403 aa17.34■□□□□ 0.37
RAB5C-203ENST00000546881 SHPRHQ149N8 1683 aa17.34■□□□□ 0.37
RAB5C-203ENST00000546881 NEXMIFQ5QGS0 1516 aa17.34■□□□□ 0.37
RAB5C-203ENST00000546881 RRBP1Q9P2E9 1410 aaKnown RBP17.34■□□□□ 0.37
RAB5C-203ENST00000546881 ASXL1Q8IXJ9 1541 aa17.33■□□□□ 0.37
RAB5C-203ENST00000546881 KIF1BO60333 1816 aa17.33■□□□□ 0.36
RAB5C-203ENST00000546881 MST1RQ04912 1400 aa17.32■□□□□ 0.36
RAB5C-203ENST00000546881 ZNF772Q68DY9 489 aaPredicted RBP17.32■□□□□ 0.36
RAB5C-203ENST00000546881 ADGRL3Q9HAR2 1447 aa17.3■□□□□ 0.36
RAB5C-203ENST00000546881 DDX17Q92841 729 aaKnown RBP17.29■□□□□ 0.36
RAB5C-203ENST00000546881 NALCNQ8IZF0 1738 aa17.28■□□□□ 0.36
RAB5C-203ENST00000546881 SLC4A1APQ9BWU0 796 aaKnown RBP17.28■□□□□ 0.36
RAB5C-203ENST00000546881 VGFO15240 615 aaPredicted RBP17.27■□□□□ 0.36
RAB5C-203ENST00000546881 NHSL1Q5SYE7 1610 aa17.27■□□□□ 0.36
RAB5C-203ENST00000546881 LRRC59Q96AG4 307 aaKnown RBP17.26■□□□□ 0.35
RAB5C-203ENST00000546881 SETD5Q9C0A6 1442 aa17.26■□□□□ 0.35
RAB5C-203ENST00000546881 HFM1A2PYH4 1435 aa17.25■□□□□ 0.35
RAB5C-203ENST00000546881 RXRBP28702 533 aa17.25■□□□□ 0.35
RAB5C-203ENST00000546881 AFF2P51816 1311 aa17.24■□□□□ 0.35
RAB5C-203ENST00000546881 C8orf37Q96NL8 207 aa17.23■□□□□ 0.35
RAB5C-203ENST00000546881 ROBO2Q9HCK4 1378 aa17.23■□□□□ 0.35
RAB5C-203ENST00000546881 PTCH1Q13635 1447 aa17.22■□□□□ 0.35
RAB5C-203ENST00000546881 FOXD1Q16676 465 aa17.22■□□□□ 0.35
RAB5C-203ENST00000546881 C1orf167Q5SNV9 1468 aa17.22■□□□□ 0.35
RAB5C-203ENST00000546881 RPGRIP1LQ68CZ1 1315 aa17.21■□□□□ 0.35
RAB5C-203ENST00000546881 PNPLA6Q8IY17 1366 aa17.21■□□□□ 0.35
RAB5C-203ENST00000546881 ORAI2Q96SN7 254 aa17.2■□□□□ 0.34
RAB5C-203ENST00000546881 ADAMTS2O95450 1211 aa17.19■□□□□ 0.34
RAB5C-203ENST00000546881 UPF1Q92900 1129 aaKnown RBP eCLIP17.19■□□□□ 0.34
RAB5C-203ENST00000546881 PPLO60437 1756 aa17.19■□□□□ 0.34
RAB5C-203ENST00000546881 RGL3Q3MIN7 710 aa17.17■□□□□ 0.34
RAB5C-203ENST00000546881 NGLY1Q96IV0 654 aa17.16■□□□□ 0.34
RAB5C-203ENST00000546881 QTRT2Q9H974 415 aaKnown RBP17.16■□□□□ 0.34
RAB5C-203ENST00000546881 CCDC144AA2RUR9 1427 aa17.15■□□□□ 0.34
RAB5C-203ENST00000546881 STK26Q9P289 416 aa17.15■□□□□ 0.34
RAB5C-203ENST00000546881 CDK12Q9NYV4 1490 aaPredicted RBP17.14■□□□□ 0.33
RAB5C-203ENST00000546881 ADGRF5Q8IZF2 1346 aa17.14■□□□□ 0.33
RAB5C-203ENST00000546881 ESCO1Q5FWF5 840 aa17.13■□□□□ 0.33
RAB5C-203ENST00000546881 SOS2Q07890 1332 aaPredicted RBP17.13■□□□□ 0.33
RAB5C-203ENST00000546881 PRAG1Q86YV5 1406 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms