RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 COPS2P61201 443 aa8.86□□□□□ -0.99
SNHG1-222ENST00000545308 PRR14Q9BWN1 585 aa8.86□□□□□ -0.99
SNHG1-222ENST00000545308 ADGRG1Q9Y653 693 aa8.86□□□□□ -0.99
SNHG1-222ENST00000545308 GFRA3O60609 400 aa8.85□□□□□ -0.99
SNHG1-222ENST00000545308 V9GY48 417 aaPredicted RBP8.85□□□□□ -0.99
SNHG1-222ENST00000545308 TMEM134Q9H6X4 195 aa8.84□□□□□ -0.99
SNHG1-222ENST00000545308 SEMA3EO15041 775 aa8.83□□□□□ -1
SNHG1-222ENST00000545308 ZPR1O75312 459 aa8.83□□□□□ -1
SNHG1-222ENST00000545308 PCDHB3Q9Y5E6 796 aa8.83□□□□□ -1
SNHG1-222ENST00000545308 GGCXP38435 758 aa8.82□□□□□ -1
SNHG1-222ENST00000545308 RCCD1A6NED2 376 aa8.81□□□□□ -1
SNHG1-222ENST00000545308 FCHSD2O94868 740 aa8.81□□□□□ -1
SNHG1-222ENST00000545308 FAM161AQ3B820 660 aa8.81□□□□□ -1
SNHG1-222ENST00000545308 TMUB1Q9BVT8 246 aa8.81□□□□□ -1
SNHG1-222ENST00000545308 BLOC1S3Q6QNY0 202 aa8.8□□□□□ -1
SNHG1-222ENST00000545308 NRG2O14511 850 aaPredicted RBP8.79□□□□□ -1
SNHG1-222ENST00000545308 LCE2BO14633 110 aa8.78□□□□□ -1
SNHG1-222ENST00000545308 ACTN4O43707 911 aaKnown RBP8.78□□□□□ -1
SNHG1-222ENST00000545308 KMT5BQ4FZB7 885 aa8.78□□□□□ -1
SNHG1-222ENST00000545308 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.77□□□□□ -1.01
SNHG1-222ENST00000545308 TRAF7Q6Q0C0 670 aa8.77□□□□□ -1.01
SNHG1-222ENST00000545308 OATP04181 439 aa8.76□□□□□ -1.01
SNHG1-222ENST00000545308 CFHP08603 1231 aa8.76□□□□□ -1.01
SNHG1-222ENST00000545308 TESPA1A2RU30 521 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-222ENST00000545308 SLC10A3P09131 477 aa8.75□□□□□ -1.01
SNHG1-222ENST00000545308 HIC1Q14526 733 aa8.75□□□□□ -1.01
SNHG1-222ENST00000545308 PXYLP1Q8TE99 480 aa8.75□□□□□ -1.01
SNHG1-222ENST00000545308 RNF223E7ERA6 249 aa8.74□□□□□ -1.01
SNHG1-222ENST00000545308 TLL1O43897 1013 aa8.74□□□□□ -1.01
SNHG1-222ENST00000545308 RBM26Q5T8P6 1007 aaKnown RBP8.73□□□□□ -1.01
SNHG1-222ENST00000545308 PDZRN3Q9UPQ7 1066 aa8.73□□□□□ -1.01
SNHG1-222ENST00000545308 SMYD5Q6GMV2 418 aa8.72□□□□□ -1.01
SNHG1-222ENST00000545308 METTL3Q86U44 580 aaKnown RBP8.72□□□□□ -1.01
SNHG1-222ENST00000545308 EMID1Q96A84 441 aaPredicted RBP8.71□□□□□ -1.02
SNHG1-222ENST00000545308 NR1I2O75469 434 aa8.7□□□□□ -1.02
SNHG1-222ENST00000545308 SLC19A1P41440 591 aa8.7□□□□□ -1.02
SNHG1-222ENST00000545308 ANKLE1Q8NAG6 615 aa8.7□□□□□ -1.02
SNHG1-222ENST00000545308 GNPATO15228 680 aa8.69□□□□□ -1.02
SNHG1-222ENST00000545308 S1PR4O95977 384 aa8.69□□□□□ -1.02
SNHG1-222ENST00000545308 FECHP22830 423 aa8.69□□□□□ -1.02
SNHG1-222ENST00000545308 RSPH4AQ5TD94 716 aa8.69□□□□□ -1.02
SNHG1-222ENST00000545308 PPEF1O14829 653 aaPredicted RBP8.68□□□□□ -1.02
SNHG1-222ENST00000545308 GPR37O15354 613 aa8.68□□□□□ -1.02
SNHG1-222ENST00000545308 ADH1BP00325 375 aa8.68□□□□□ -1.02
SNHG1-222ENST00000545308 SPRYD7Q5W111 196 aa8.67□□□□□ -1.02
SNHG1-222ENST00000545308 TRIM67Q6ZTA4 783 aa8.67□□□□□ -1.02
SNHG1-222ENST00000545308 SCUBE3Q8IX30 993 aa8.67□□□□□ -1.02
SNHG1-222ENST00000545308 LIAT1Q6ZQX7 453 aa8.65□□□□□ -1.02
SNHG1-222ENST00000545308 ZNF598Q86UK7 904 aaKnown RBP8.65□□□□□ -1.02
SNHG1-222ENST00000545308 SLC6A16Q9GZN6 736 aa8.65□□□□□ -1.02
SNHG1-222ENST00000545308 DAXXQ9UER7 740 aaPredicted RBP8.65□□□□□ -1.02
SNHG1-222ENST00000545308 PUS10Q3MIT2 529 aaKnown RBP8.64□□□□□ -1.03
SNHG1-222ENST00000545308 SPSB2Q99619 263 aa8.63□□□□□ -1.03
SNHG1-222ENST00000545308 RDH13Q8NBN7 331 aa8.62□□□□□ -1.03
SNHG1-222ENST00000545308 DDX11L8A8MPP1 907 aa8.61□□□□□ -1.03
SNHG1-222ENST00000545308 PRR20EP86478 221 aa8.61□□□□□ -1.03
SNHG1-222ENST00000545308 PRR20CP86479 221 aa8.61□□□□□ -1.03
SNHG1-222ENST00000545308 PRR20DP86480 221 aa8.61□□□□□ -1.03
SNHG1-222ENST00000545308 PRR20BP86481 221 aa8.61□□□□□ -1.03
SNHG1-222ENST00000545308 PRR20AP86496 221 aa8.61□□□□□ -1.03
SNHG1-222ENST00000545308 PLA2G2CQ5R387 149 aa8.6□□□□□ -1.03
SNHG1-222ENST00000545308 MORN1Q5T089 497 aa8.6□□□□□ -1.03
SNHG1-222ENST00000545308 ZNF697Q5TEC3 545 aa8.6□□□□□ -1.03
SNHG1-222ENST00000545308 NLRP7Q8WX94 980 aa8.6□□□□□ -1.03
SNHG1-222ENST00000545308 PHOX2BQ99453 314 aa8.6□□□□□ -1.03
SNHG1-222ENST00000545308 FUT2Q10981 343 aa8.59□□□□□ -1.03
SNHG1-222ENST00000545308 ZNF787Q6DD87 383 aa8.59□□□□□ -1.03
SNHG1-222ENST00000545308 GPIHBP1Q8IV16 184 aa8.59□□□□□ -1.03
SNHG1-222ENST00000545308 GDF9O60383 454 aa8.58□□□□□ -1.04
SNHG1-222ENST00000545308 DGAT1O75907 488 aa8.58□□□□□ -1.04
SNHG1-222ENST00000545308 ATP6V1AP38606 617 aa8.58□□□□□ -1.04
SNHG1-222ENST00000545308 GCGRP47871 477 aa8.58□□□□□ -1.04
SNHG1-222ENST00000545308 PKDCCQ504Y2 493 aa8.58□□□□□ -1.04
SNHG1-222ENST00000545308 SULF1Q8IWU6 871 aa8.58□□□□□ -1.04
SNHG1-222ENST00000545308 THAP11Q96EK4 314 aa8.57□□□□□ -1.04
SNHG1-222ENST00000545308 SLC27A5Q9Y2P5 690 aa8.56□□□□□ -1.04
SNHG1-222ENST00000545308 TNFRSF10AO00220 468 aa8.55□□□□□ -1.04
SNHG1-222ENST00000545308 FMNL1O95466 1100 aaPredicted RBP8.55□□□□□ -1.04
SNHG1-222ENST00000545308 MYT1Q01538 1121 aa8.55□□□□□ -1.04
SNHG1-222ENST00000545308 FAM160A2Q8N612 972 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-222ENST00000545308 SALL2Q9Y467 1007 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-222ENST00000545308 RPIAP49247 311 aa8.53□□□□□ -1.04
SNHG1-222ENST00000545308 FAM187AA6NFU0 413 aa8.52□□□□□ -1.05
SNHG1-222ENST00000545308 LMOD2Q6P5Q4 547 aa8.52□□□□□ -1.05
SNHG1-222ENST00000545308 BRICD5Q6PL45 260 aa8.52□□□□□ -1.05
SNHG1-222ENST00000545308 PKD2L1Q9P0L9 805 aa8.52□□□□□ -1.05
SNHG1-222ENST00000545308 FCF1Q9Y324 198 aaKnown RBP8.52□□□□□ -1.05
SNHG1-222ENST00000545308 MAP2K5Q13163 448 aa8.5□□□□□ -1.05
SNHG1-222ENST00000545308 GRIPAP1Q4V328 841 aa8.5□□□□□ -1.05
SNHG1-222ENST00000545308 CD2BP2O95400 341 aaKnown RBP8.49□□□□□ -1.05
SNHG1-222ENST00000545308 FOXC1Q12948 553 aa8.49□□□□□ -1.05
SNHG1-222ENST00000545308 PRDM9Q9NQV7 894 aa8.49□□□□□ -1.05
SNHG1-222ENST00000545308 CD46P15529 392 aa8.48□□□□□ -1.05
SNHG1-222ENST00000545308 MSS51Q4VC12 460 aa8.48□□□□□ -1.05
SNHG1-222ENST00000545308 RNF19BQ6ZMZ0 732 aa8.48□□□□□ -1.05
SNHG1-222ENST00000545308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.48□□□□□ -1.05
SNHG1-222ENST00000545308 ZNF775Q96BV0 537 aaPredicted RBP8.48□□□□□ -1.05
SNHG1-222ENST00000545308 TULP1O00294 542 aaPredicted RBP8.47□□□□□ -1.05
SNHG1-222ENST00000545308 IRF6O14896 467 aa8.46□□□□□ -1.06
SNHG1-222ENST00000545308 Q3C1V9 767 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms