RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 CLK2P49760 499 aaKnown RBP12.57□□□□□ -0.4
LEMD3-206ENST00000545026 SLC4A5Q9BY07 1137 aa12.56□□□□□ -0.4
LEMD3-206ENST00000545026 RABGEF1Q9UJ41 708 aa12.55□□□□□ -0.4
LEMD3-206ENST00000545026 DMRTA1Q5VZB9 504 aa12.54□□□□□ -0.4
LEMD3-206ENST00000545026 LIMD1Q9UGP4 676 aa12.54□□□□□ -0.4
LEMD3-206ENST00000545026 ATP1B4Q9UN42 357 aaPredicted RBP12.54□□□□□ -0.4
LEMD3-206ENST00000545026 AXIN2Q9Y2T1 843 aa12.54□□□□□ -0.4
LEMD3-206ENST00000545026 EMP3P54852 163 aa12.52□□□□□ -0.41
LEMD3-206ENST00000545026 RIC3Q7Z5B4 369 aa12.52□□□□□ -0.41
LEMD3-206ENST00000545026 MARVELD3Q96A59 401 aa12.52□□□□□ -0.41
LEMD3-206ENST00000545026 SPTLC1O15269 473 aa12.51□□□□□ -0.41
LEMD3-206ENST00000545026 PBX2P40425 430 aa12.51□□□□□ -0.41
LEMD3-206ENST00000545026 NUTM1Q86Y26 1132 aa12.51□□□□□ -0.41
LEMD3-206ENST00000545026 MCM6Q14566 821 aa12.5□□□□□ -0.41
LEMD3-206ENST00000545026 FBXO31Q5XUX0 539 aaPredicted RBP12.5□□□□□ -0.41
LEMD3-206ENST00000545026 SEPT9Q9UHD8 586 aaPredicted RBP12.5□□□□□ -0.41
LEMD3-206ENST00000545026 TUSC1Q2TAM9 212 aa12.49□□□□□ -0.41
LEMD3-206ENST00000545026 ZNF687Q8N1G0 1237 aa12.49□□□□□ -0.41
LEMD3-206ENST00000545026 RDH13Q8NBN7 331 aa12.49□□□□□ -0.41
LEMD3-206ENST00000545026 VPS9D1Q9Y2B5 631 aa12.49□□□□□ -0.41
LEMD3-206ENST00000545026 MOXD2PA6NHM9 499 aa12.48□□□□□ -0.41
LEMD3-206ENST00000545026 SWT1Q5T5J6 900 aaKnown RBP12.48□□□□□ -0.41
LEMD3-206ENST00000545026 RSBN1LQ6PCB5 846 aaPredicted RBP12.48□□□□□ -0.41
LEMD3-206ENST00000545026 FAM205CA6NFA0 338 aa12.47□□□□□ -0.41
LEMD3-206ENST00000545026 PPP2R2DQ66LE6 453 aa12.47□□□□□ -0.41
LEMD3-206ENST00000545026 SLC10A3P09131 477 aa12.46□□□□□ -0.41
LEMD3-206ENST00000545026 GJA5P36382 358 aa12.46□□□□□ -0.41
LEMD3-206ENST00000545026 RFC5P40937 340 aa12.46□□□□□ -0.41
LEMD3-206ENST00000545026 KDM4AO75164 1064 aa12.45□□□□□ -0.42
LEMD3-206ENST00000545026 NDUFV2P19404 249 aa12.45□□□□□ -0.42
LEMD3-206ENST00000545026 GCGRP47871 477 aa12.45□□□□□ -0.42
LEMD3-206ENST00000545026 FAM98CQ17RN3 349 aaKnown RBP12.45□□□□□ -0.42
LEMD3-206ENST00000545026 RSPH4AQ5TD94 716 aa12.44□□□□□ -0.42
LEMD3-206ENST00000545026 ARXQ96QS3 562 aa12.44□□□□□ -0.42
LEMD3-206ENST00000545026 POTEB3A0JP26 581 aa12.43□□□□□ -0.42
LEMD3-206ENST00000545026 A6NJR5 290 aa12.43□□□□□ -0.42
LEMD3-206ENST00000545026 POTEBQ6S5H4 581 aa12.43□□□□□ -0.42
LEMD3-206ENST00000545026 CLUAP1Q96AJ1 413 aa12.43□□□□□ -0.42
LEMD3-206ENST00000545026 UBTFP17480 764 aaKnown RBP12.42□□□□□ -0.42
LEMD3-206ENST00000545026 BANK1Q8NDB2 785 aa12.42□□□□□ -0.42
LEMD3-206ENST00000545026 PCDHB15Q9Y5E8 787 aa12.42□□□□□ -0.42
LEMD3-206ENST00000545026 BHMG1C9JSJ3 638 aaPredicted RBP12.41□□□□□ -0.42
LEMD3-206ENST00000545026 USP46P62068 366 aa12.41□□□□□ -0.42
LEMD3-206ENST00000545026 QPCTQ16769 361 aa12.41□□□□□ -0.42
LEMD3-206ENST00000545026 LAPTM4BQ86VI4 370 aa12.41□□□□□ -0.42
LEMD3-206ENST00000545026 FAM163AQ96GL9 167 aaPredicted RBP12.41□□□□□ -0.42
LEMD3-206ENST00000545026 SPDYE5A6NIY4 337 aa12.4□□□□□ -0.42
LEMD3-206ENST00000545026 LILRB3O75022 631 aa12.4□□□□□ -0.42
LEMD3-206ENST00000545026 HDGFP51858 240 aaKnown RBP12.4□□□□□ -0.42
LEMD3-206ENST00000545026 CSPP1Q1MSJ5 1256 aa12.4□□□□□ -0.42
LEMD3-206ENST00000545026 TMEM259Q4ZIN3 620 aa12.4□□□□□ -0.42
LEMD3-206ENST00000545026 HS3ST6Q96QI5 342 aa12.4□□□□□ -0.42
LEMD3-206ENST00000545026 HOXA2O43364 376 aa12.39□□□□□ -0.43
LEMD3-206ENST00000545026 SNRKQ9NRH2 765 aa12.39□□□□□ -0.43
LEMD3-206ENST00000545026 TK2O00142 265 aa12.38□□□□□ -0.43
LEMD3-206ENST00000545026 SAMD7Q7Z3H4 446 aa12.38□□□□□ -0.43
LEMD3-206ENST00000545026 NBPF3Q9H094 633 aa12.38□□□□□ -0.43
LEMD3-206ENST00000545026 SLF2Q8IX21 1173 aa12.37□□□□□ -0.43
LEMD3-206ENST00000545026 RTL5Q5HYW3 569 aaPredicted RBP12.36□□□□□ -0.43
LEMD3-206ENST00000545026 C1orf115Q9H7X2 142 aa12.36□□□□□ -0.43
LEMD3-206ENST00000545026 FDX1P10109 184 aa12.35□□□□□ -0.43
LEMD3-206ENST00000545026 LCE2DQ5TA82 110 aaPredicted RBP12.35□□□□□ -0.43
LEMD3-206ENST00000545026 PRPF38BQ5VTL8 546 aaKnown RBP12.35□□□□□ -0.43
LEMD3-206ENST00000545026 CABLES1Q8TDN4 633 aa12.35□□□□□ -0.43
LEMD3-206ENST00000545026 POM121Q96HA1 1249 aa12.35□□□□□ -0.43
LEMD3-206ENST00000545026 TRAK2O60296 914 aa12.34□□□□□ -0.43
LEMD3-206ENST00000545026 SLC4A3P48751 1232 aa12.34□□□□□ -0.43
LEMD3-206ENST00000545026 HLA-CQ95604 372 aa12.34□□□□□ -0.43
LEMD3-206ENST00000545026 ZFRQ96KR1 1074 aaKnown RBP12.34□□□□□ -0.43
LEMD3-206ENST00000545026 PCDHGC3Q9UN70 934 aa12.34□□□□□ -0.43
LEMD3-206ENST00000545026 LSM11P83369 360 aaKnown RBP eCLIP12.33□□□□□ -0.44
LEMD3-206ENST00000545026 NUTM2BA6NNL0 878 aaPredicted RBP12.32□□□□□ -0.44
LEMD3-206ENST00000545026 NUTM2EB1AL46 878 aaPredicted RBP12.32□□□□□ -0.44
LEMD3-206ENST00000545026 HRCP23327 699 aa12.32□□□□□ -0.44
LEMD3-206ENST00000545026 GUCA2AQ02747 115 aa12.32□□□□□ -0.44
LEMD3-206ENST00000545026 NUTM2DQ5VT03 806 aaPredicted RBP12.32□□□□□ -0.44
LEMD3-206ENST00000545026 NUTM2AQ8IVF1 878 aaPredicted RBP12.32□□□□□ -0.44
LEMD3-206ENST00000545026 ARID3CA6NKF2 412 aa12.31□□□□□ -0.44
LEMD3-206ENST00000545026 CFHP08603 1231 aa12.31□□□□□ -0.44
LEMD3-206ENST00000545026 ADGRD1Q6QNK2 874 aa12.31□□□□□ -0.44
LEMD3-206ENST00000545026 MTMR14Q8NCE2 650 aa12.31□□□□□ -0.44
LEMD3-206ENST00000545026 ZBTB3Q9H5J0 574 aa12.31□□□□□ -0.44
LEMD3-206ENST00000545026 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
LEMD3-206ENST00000545026 RAD21O60216 631 aa12.3□□□□□ -0.44
LEMD3-206ENST00000545026 FUT2Q10981 343 aa12.3□□□□□ -0.44
LEMD3-206ENST00000545026 PROSER2Q86WR7 435 aaPredicted RBP12.3□□□□□ -0.44
LEMD3-206ENST00000545026 HOMEZQ8IX15 550 aa12.3□□□□□ -0.44
LEMD3-206ENST00000545026 FNBP4Q8N3X1 1017 aaPredicted RBP12.3□□□□□ -0.44
LEMD3-206ENST00000545026 MRPL50Q8N5N7 158 aaKnown RBP12.3□□□□□ -0.44
LEMD3-206ENST00000545026 APBB1O00213 710 aa12.29□□□□□ -0.44
LEMD3-206ENST00000545026 HRO43593 1189 aa12.29□□□□□ -0.44
LEMD3-206ENST00000545026 AP1G2O75843 785 aa12.29□□□□□ -0.44
LEMD3-206ENST00000545026 SOCS7O14512 581 aa12.27□□□□□ -0.45
LEMD3-206ENST00000545026 RNF40O75150 1001 aa12.27□□□□□ -0.45
LEMD3-206ENST00000545026 ATP6V1AP38606 617 aa12.26□□□□□ -0.45
LEMD3-206ENST00000545026 GRIPAP1Q4V328 841 aa12.26□□□□□ -0.45
LEMD3-206ENST00000545026 USP17L8P0C7I0 530 aa12.25□□□□□ -0.45
LEMD3-206ENST00000545026 LRCH3Q96II8 777 aa12.25□□□□□ -0.45
LEMD3-206ENST00000545026 MTMR2Q13614 643 aa12.24□□□□□ -0.45
LEMD3-206ENST00000545026 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms