RNA–Protein interactions for RNA: ENST00000544683.5

CLPB-214, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-214ENST00000544683 ITGAEP38570 1179 aa13.92□□□□□ -0.18
CLPB-214ENST00000544683 NUP155O75694 1391 aa13.92□□□□□ -0.18
CLPB-214ENST00000544683 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
CLPB-214ENST00000544683 KCNA6P17658 529 aa13.91□□□□□ -0.18
CLPB-214ENST00000544683 ILDR2Q71H61 639 aa13.91□□□□□ -0.18
CLPB-214ENST00000544683 RIMS2Q9UQ26 1411 aa13.9□□□□□ -0.18
CLPB-214ENST00000544683 SLC26A8Q96RN1 970 aa13.9□□□□□ -0.18
CLPB-214ENST00000544683 PLEKHG1Q9ULL1 1385 aa13.9□□□□□ -0.18
CLPB-214ENST00000544683 NKTRP30414 1462 aaKnown RBP13.89□□□□□ -0.19
CLPB-214ENST00000544683 HDGFP51858 240 aaKnown RBP13.88□□□□□ -0.19
CLPB-214ENST00000544683 NAIPQ13075 1403 aa13.87□□□□□ -0.19
CLPB-214ENST00000544683 MED1Q15648 1581 aaPredicted RBP13.87□□□□□ -0.19
CLPB-214ENST00000544683 TMEM94Q12767 1356 aa13.86□□□□□ -0.19
CLPB-214ENST00000544683 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLPB-214ENST00000544683 DIP2AQ14689 1571 aa13.86□□□□□ -0.19
CLPB-214ENST00000544683 ADAMTS13Q76LX8 1427 aa13.85□□□□□ -0.19
CLPB-214ENST00000544683 CHGAP10645 457 aaKnown RBP13.84□□□□□ -0.19
CLPB-214ENST00000544683 PROSER2Q86WR7 435 aaPredicted RBP13.84□□□□□ -0.19
CLPB-214ENST00000544683 TBX22Q9Y458 520 aa13.84□□□□□ -0.19
CLPB-214ENST00000544683 KIF1BO60333 1816 aa13.84□□□□□ -0.19
CLPB-214ENST00000544683 FAM135BQ49AJ0 1406 aa13.83□□□□□ -0.2
CLPB-214ENST00000544683 PPP1R15AO75807 674 aaPredicted RBP13.83□□□□□ -0.2
CLPB-214ENST00000544683 BCANQ96GW7 911 aa13.83□□□□□ -0.2
CLPB-214ENST00000544683 CLTCL1P53675 1640 aa13.82□□□□□ -0.2
CLPB-214ENST00000544683 NRXN3Q9Y4C0 1643 aa13.82□□□□□ -0.2
CLPB-214ENST00000544683 HFM1A2PYH4 1435 aa13.82□□□□□ -0.2
CLPB-214ENST00000544683 ROBO1Q9Y6N7 1651 aa13.82□□□□□ -0.2
CLPB-214ENST00000544683 TRPM2O94759 1503 aa13.81□□□□□ -0.2
CLPB-214ENST00000544683 PIK3R4Q99570 1358 aa13.81□□□□□ -0.2
CLPB-214ENST00000544683 SOCS7O14512 581 aa13.8□□□□□ -0.2
CLPB-214ENST00000544683 RBM33Q96EV2 1170 aaKnown RBP13.8□□□□□ -0.2
CLPB-214ENST00000544683 NCOA3Q9Y6Q9 1424 aa13.8□□□□□ -0.2
CLPB-214ENST00000544683 SETBP1Q9Y6X0 1596 aa13.79□□□□□ -0.2
CLPB-214ENST00000544683 NUTM2DQ5VT03 806 aaPredicted RBP13.79□□□□□ -0.2
CLPB-214ENST00000544683 SENP3Q9H4L4 574 aaPredicted RBP13.79□□□□□ -0.2
CLPB-214ENST00000544683 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.78□□□□□ -0.2
CLPB-214ENST00000544683 MSH6P52701 1360 aa13.78□□□□□ -0.2
CLPB-214ENST00000544683 NEXMIFQ5QGS0 1516 aa13.78□□□□□ -0.2
CLPB-214ENST00000544683 XRN1Q8IZH2 1706 aaKnown RBP13.78□□□□□ -0.2
CLPB-214ENST00000544683 PTPRUQ92729 1446 aa13.76□□□□□ -0.21
CLPB-214ENST00000544683 PHLPP1O60346 1717 aa13.75□□□□□ -0.21
CLPB-214ENST00000544683 SETD1AO15047 1707 aaKnown RBP13.74□□□□□ -0.21
CLPB-214ENST00000544683 SLAIN2Q9P270 581 aa13.74□□□□□ -0.21
CLPB-214ENST00000544683 PPLO60437 1756 aa13.73□□□□□ -0.21
CLPB-214ENST00000544683 ZNF326Q5BKZ1 582 aaKnown RBP13.73□□□□□ -0.21
CLPB-214ENST00000544683 TRIM52Q96A61 297 aa13.72□□□□□ -0.21
CLPB-214ENST00000544683 AMOTL2Q9Y2J4 779 aa13.72□□□□□ -0.21
CLPB-214ENST00000544683 C19orf44Q9H6X5 657 aa13.71□□□□□ -0.21
CLPB-214ENST00000544683 COL16A1Q07092 1604 aaPredicted RBP13.71□□□□□ -0.22
CLPB-214ENST00000544683 SLC4A1APQ9BWU0 796 aaKnown RBP13.7□□□□□ -0.22
CLPB-214ENST00000544683 METP08581 1390 aa13.7□□□□□ -0.22
CLPB-214ENST00000544683 CADPS2Q86UW7 1296 aa13.69□□□□□ -0.22
CLPB-214ENST00000544683 DCCP43146 1447 aa13.69□□□□□ -0.22
CLPB-214ENST00000544683 AHDC1Q5TGY3 1603 aaPredicted RBP13.68□□□□□ -0.22
CLPB-214ENST00000544683 PHF23Q9BUL5 403 aaPredicted RBP13.68□□□□□ -0.22
CLPB-214ENST00000544683 NALCNQ8IZF0 1738 aa13.67□□□□□ -0.22
CLPB-214ENST00000544683 IFT172Q9UG01 1749 aa13.67□□□□□ -0.22
CLPB-214ENST00000544683 RPGRIP1LQ68CZ1 1315 aa13.67□□□□□ -0.22
CLPB-214ENST00000544683 C14orf37Q86TY3 774 aa13.67□□□□□ -0.22
CLPB-214ENST00000544683 VGFO15240 615 aaPredicted RBP13.66□□□□□ -0.22
CLPB-214ENST00000544683 ATF3P18847 181 aa13.66□□□□□ -0.22
CLPB-214ENST00000544683 RGS17Q9UGC6 210 aaPredicted RBP13.66□□□□□ -0.22
CLPB-214ENST00000544683 SHPRHQ149N8 1683 aa13.65□□□□□ -0.22
CLPB-214ENST00000544683 PRAG1Q86YV5 1406 aa13.64□□□□□ -0.23
CLPB-214ENST00000544683 JCADQ9P266 1359 aa13.64□□□□□ -0.23
CLPB-214ENST00000544683 NHSL1Q5SYE7 1610 aa13.64□□□□□ -0.23
CLPB-214ENST00000544683 MST1RQ04912 1400 aa13.64□□□□□ -0.23
CLPB-214ENST00000544683 ADGRL3Q9HAR2 1447 aa13.64□□□□□ -0.23
CLPB-214ENST00000544683 FOXD1Q16676 465 aa13.63□□□□□ -0.23
CLPB-214ENST00000544683 MPHOSPH9Q99550 1183 aa13.63□□□□□ -0.23
CLPB-214ENST00000544683 PTCH1Q13635 1447 aa13.63□□□□□ -0.23
CLPB-214ENST00000544683 ACIN1Q9UKV3 1341 aaKnown RBP13.63□□□□□ -0.23
CLPB-214ENST00000544683 CCDC144AA2RUR9 1427 aa13.62□□□□□ -0.23
CLPB-214ENST00000544683 SPATA31E1Q6ZUB1 1445 aa13.62□□□□□ -0.23
CLPB-214ENST00000544683 ASXL1Q8IXJ9 1541 aa13.61□□□□□ -0.23
CLPB-214ENST00000544683 BRINP3Q76B58 766 aa13.61□□□□□ -0.23
CLPB-214ENST00000544683 SETD5Q9C0A6 1442 aa13.6□□□□□ -0.23
CLPB-214ENST00000544683 LAMC1P11047 1609 aa13.59□□□□□ -0.23
CLPB-214ENST00000544683 ROBO2Q9HCK4 1378 aa13.58□□□□□ -0.23
CLPB-214ENST00000544683 LRP6O75581 1613 aa13.58□□□□□ -0.24
CLPB-214ENST00000544683 KNDC1Q76NI1 1749 aa13.58□□□□□ -0.24
CLPB-214ENST00000544683 SPATA31A6Q5VVP1 1343 aa13.58□□□□□ -0.24
CLPB-214ENST00000544683 ANKRD30BQ9BXX2 1392 aa13.58□□□□□ -0.24
CLPB-214ENST00000544683 POTEAQ6S8J7 498 aa13.57□□□□□ -0.24
CLPB-214ENST00000544683 ADGRF5Q8IZF2 1346 aa13.57□□□□□ -0.24
CLPB-214ENST00000544683 C1orf167Q5SNV9 1468 aa13.55□□□□□ -0.24
CLPB-214ENST00000544683 TECPR2O15040 1411 aa13.55□□□□□ -0.24
CLPB-214ENST00000544683 RGL3Q3MIN7 710 aa13.54□□□□□ -0.24
CLPB-214ENST00000544683 RAB3GAP2Q9H2M9 1393 aa13.54□□□□□ -0.24
CLPB-214ENST00000544683 PIK3C2GO75747 1445 aa13.54□□□□□ -0.24
CLPB-214ENST00000544683 CDC42BPGQ6DT37 1551 aa13.54□□□□□ -0.24
CLPB-214ENST00000544683 NRXN1Q9ULB1 1477 aa13.52□□□□□ -0.25
CLPB-214ENST00000544683 MYOM2P54296 1465 aa13.51□□□□□ -0.25
CLPB-214ENST00000544683 LRPPRCP42704 1394 aaKnown RBP13.51□□□□□ -0.25
CLPB-214ENST00000544683 ABCC11Q96J66 1382 aa13.51□□□□□ -0.25
CLPB-214ENST00000544683 LRRC59Q96AG4 307 aaKnown RBP13.51□□□□□ -0.25
CLPB-214ENST00000544683 DDX17Q92841 729 aaKnown RBP13.5□□□□□ -0.25
CLPB-214ENST00000544683 PNPLA6Q8IY17 1366 aa13.49□□□□□ -0.25
CLPB-214ENST00000544683 FMN2Q9NZ56 1722 aa13.49□□□□□ -0.25
CLPB-214ENST00000544683 SOS2Q07890 1332 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms