RNA–Protein interactions for RNA: ENST00000544683.5

CLPB-214, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-214ENST00000544683 NISCHQ9Y2I1 1504 aa22.8■■□□□ 1.24
CLPB-214ENST00000544683 CCDC180Q9P1Z9 1646 aa20.47■□□□□ 0.87
CLPB-214ENST00000544683 ABCC9O60706 1549 aa20.23■□□□□ 0.83
CLPB-214ENST00000544683 RB1CC1Q8TDY2 1594 aa19.37■□□□□ 0.69
CLPB-214ENST00000544683 NACADO15069 1562 aa19.28■□□□□ 0.68
CLPB-214ENST00000544683 MYO15BQ96JP2 1530 aa19.09■□□□□ 0.65
CLPB-214ENST00000544683 DCAF8L2P0C7V8 631 aa19.06■□□□□ 0.64
CLPB-214ENST00000544683 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
CLPB-214ENST00000544683 ZCCHC6Q5VYS8 1495 aaKnown RBP18.92■□□□□ 0.62
CLPB-214ENST00000544683 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
CLPB-214ENST00000544683 DCAF1Q9Y4B6 1507 aa18.88■□□□□ 0.61
CLPB-214ENST00000544683 BICRAQ9NZM4 1560 aa18.84■□□□□ 0.61
CLPB-214ENST00000544683 PABPN1Q86U42 306 aaKnown RBP eCLIP18.82■□□□□ 0.6
CLPB-214ENST00000544683 SHROOM4Q9ULL8 1493 aa18.59■□□□□ 0.57
CLPB-214ENST00000544683 SCRIBQ14160 1630 aa18.57■□□□□ 0.56
CLPB-214ENST00000544683 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
CLPB-214ENST00000544683 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.52
CLPB-214ENST00000544683 CECR2Q9BXF3 1484 aa18.22■□□□□ 0.51
CLPB-214ENST00000544683 NCAPD3P42695 1498 aa17.78■□□□□ 0.44
CLPB-214ENST00000544683 SMARCA4P51532 1647 aa17.78■□□□□ 0.44
CLPB-214ENST00000544683 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
CLPB-214ENST00000544683 SMARCA2P51531 1590 aa17.7■□□□□ 0.42
CLPB-214ENST00000544683 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
CLPB-214ENST00000544683 HMGXB3Q12766 1538 aa17.68■□□□□ 0.42
CLPB-214ENST00000544683 PEG3Q9GZU2 1588 aa17.63■□□□□ 0.41
CLPB-214ENST00000544683 MROH2BQ7Z745 1585 aa17.56■□□□□ 0.4
CLPB-214ENST00000544683 BAZ1BQ9UIG0 1483 aaKnown RBP17.55■□□□□ 0.4
CLPB-214ENST00000544683 ERCC6Q03468 1493 aa17.44■□□□□ 0.38
CLPB-214ENST00000544683 NESP48681 1621 aa17.44■□□□□ 0.38
CLPB-214ENST00000544683 CUX2O14529 1486 aa17.43■□□□□ 0.38
CLPB-214ENST00000544683 WIZO95785 1651 aa17.39■□□□□ 0.37
CLPB-214ENST00000544683 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
CLPB-214ENST00000544683 THOC2Q8NI27 1593 aaKnown RBP17.29■□□□□ 0.36
CLPB-214ENST00000544683 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
CLPB-214ENST00000544683 DNAJC5Q9H3Z4 198 aa17.25■□□□□ 0.35
CLPB-214ENST00000544683 RSF1Q96T23 1441 aaPredicted RBP17.23■□□□□ 0.35
CLPB-214ENST00000544683 PDS5BQ9NTI5 1447 aa17.22■□□□□ 0.35
CLPB-214ENST00000544683 CADPSQ9ULU8 1353 aa17.22■□□□□ 0.35
CLPB-214ENST00000544683 TOP2AP11388 1531 aaKnown RBP17.16■□□□□ 0.34
CLPB-214ENST00000544683 MRC2Q9UBG0 1479 aa17.08■□□□□ 0.32
CLPB-214ENST00000544683 CFTRP13569 1480 aa17.07■□□□□ 0.32
CLPB-214ENST00000544683 WDR62O43379 1518 aa17.06■□□□□ 0.32
CLPB-214ENST00000544683 CEP164Q9UPV0 1460 aa17.03■□□□□ 0.32
CLPB-214ENST00000544683 PRDM2Q13029 1718 aa17.02■□□□□ 0.32
CLPB-214ENST00000544683 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.32
CLPB-214ENST00000544683 CCDC88BA6NC98 1476 aa16.94■□□□□ 0.3
CLPB-214ENST00000544683 URB2Q14146 1524 aaKnown RBP16.9■□□□□ 0.3
CLPB-214ENST00000544683 TOPBP1Q92547 1522 aa16.73■□□□□ 0.27
CLPB-214ENST00000544683 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
CLPB-214ENST00000544683 DNMBPQ6XZF7 1577 aa16.7■□□□□ 0.26
CLPB-214ENST00000544683 IFT140Q96RY7 1462 aa16.69■□□□□ 0.26
CLPB-214ENST00000544683 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
CLPB-214ENST00000544683 TARBP1Q13395 1621 aaKnown RBP16.61■□□□□ 0.25
CLPB-214ENST00000544683 OSCARQ8IYS5 282 aa16.61■□□□□ 0.25
CLPB-214ENST00000544683 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
CLPB-214ENST00000544683 POLA1P09884 1462 aaPredicted RBP16.56■□□□□ 0.24
CLPB-214ENST00000544683 CUX1P39880 1505 aa16.5■□□□□ 0.23
CLPB-214ENST00000544683 AQRO60306 1485 aaKnown RBP eCLIP16.49■□□□□ 0.23
CLPB-214ENST00000544683 CHD1O14646 1710 aa16.49■□□□□ 0.23
CLPB-214ENST00000544683 RAD54L2Q9Y4B4 1467 aa16.48■□□□□ 0.23
CLPB-214ENST00000544683 SUPT5HO00267 1087 aaKnown RBP16.47■□□□□ 0.23
CLPB-214ENST00000544683 TRIM41Q8WV44 630 aa16.47■□□□□ 0.23
CLPB-214ENST00000544683 WDR97A6NE52 1622 aa16.47■□□□□ 0.23
CLPB-214ENST00000544683 FGD5Q6ZNL6 1462 aa16.47■□□□□ 0.23
CLPB-214ENST00000544683 SOGA1O94964 1423 aa16.46■□□□□ 0.23
CLPB-214ENST00000544683 RIMBP3CA6NJZ7 1639 aa16.45■□□□□ 0.22
CLPB-214ENST00000544683 RIMBP3BA6NNM3 1639 aa16.45■□□□□ 0.22
CLPB-214ENST00000544683 RIMBP3Q9UFD9 1639 aa16.45■□□□□ 0.22
CLPB-214ENST00000544683 TDRD9Q8NDG6 1382 aaKnown RBP16.4■□□□□ 0.22
CLPB-214ENST00000544683 ARHGEF11O15085 1522 aa16.38■□□□□ 0.21
CLPB-214ENST00000544683 PBRM1Q86U86 1689 aa16.34■□□□□ 0.21
CLPB-214ENST00000544683 SNAPC4Q5SXM2 1469 aa16.34■□□□□ 0.21
CLPB-214ENST00000544683 GRIN2BQ13224 1484 aa16.33■□□□□ 0.2
CLPB-214ENST00000544683 MAGI1Q96QZ7 1491 aaPredicted RBP16.33■□□□□ 0.2
CLPB-214ENST00000544683 BIVM-ERCC5R4GMW8 1640 aa16.31■□□□□ 0.2
CLPB-214ENST00000544683 ABCA10Q8WWZ4 1543 aa16.31■□□□□ 0.2
CLPB-214ENST00000544683 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
CLPB-214ENST00000544683 FBLN2P98095 1184 aa16.3■□□□□ 0.2
CLPB-214ENST00000544683 TOP2BQ02880 1626 aa16.29■□□□□ 0.2
CLPB-214ENST00000544683 GAPVD1Q14C86 1478 aa16.29■□□□□ 0.2
CLPB-214ENST00000544683 CLASP1Q7Z460 1538 aa16.27■□□□□ 0.2
CLPB-214ENST00000544683 SYNJ2O15056 1496 aa16.27■□□□□ 0.19
CLPB-214ENST00000544683 SYNJ1O43426 1573 aa16.26■□□□□ 0.19
CLPB-214ENST00000544683 WRNQ14191 1432 aaPredicted RBP eCLIP16.24■□□□□ 0.19
CLPB-214ENST00000544683 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
CLPB-214ENST00000544683 ARAP1Q96P48 1450 aa16.22■□□□□ 0.19
CLPB-214ENST00000544683 CYB5RLQ6IPT4 315 aa16.19■□□□□ 0.18
CLPB-214ENST00000544683 ADAMTS12P58397 1594 aa16.15■□□□□ 0.18
CLPB-214ENST00000544683 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
CLPB-214ENST00000544683 ERICH3Q5RHP9 1530 aa16.12■□□□□ 0.17
CLPB-214ENST00000544683 FHAD1B1AJZ9 1412 aa16.08■□□□□ 0.16
CLPB-214ENST00000544683 NUP160Q12769 1436 aa16.08■□□□□ 0.16
CLPB-214ENST00000544683 CEP170Q5SW79 1584 aa16.08■□□□□ 0.16
CLPB-214ENST00000544683 SHROOM2Q13796 1616 aa16.04■□□□□ 0.16
CLPB-214ENST00000544683 ERCC6L2Q5T890 1561 aa16■□□□□ 0.15
CLPB-214ENST00000544683 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
CLPB-214ENST00000544683 RUSC2Q8N2Y8 1516 aa15.93■□□□□ 0.14
CLPB-214ENST00000544683 CUL7Q14999 1698 aa15.92■□□□□ 0.14
CLPB-214ENST00000544683 KIF27Q86VH2 1401 aa15.92■□□□□ 0.14
CLPB-214ENST00000544683 IGF1RP08069 1367 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms