RNA–Protein interactions for RNA: ENST00000544620.5

RAD9A-209, Transcript of RAD9 checkpoint clamp component A, humanhuman

TSL 3

Gene RAD9A, Length 829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-209ENST00000544620 RRBP1Q9P2E9 1410 aaKnown RBP28.3■■■□□ 2.12
RAD9A-209ENST00000544620 NUP155O75694 1391 aa28.28■■■□□ 2.12
RAD9A-209ENST00000544620 MYO5BQ9ULV0 1848 aa28.27■■■□□ 2.12
RAD9A-209ENST00000544620 TMEM131LA2VDJ0 1609 aa28.22■■■□□ 2.11
RAD9A-209ENST00000544620 CHGAP10645 457 aaKnown RBP28.18■■■□□ 2.1
RAD9A-209ENST00000544620 ZFYVE9O95405 1425 aa28.18■■■□□ 2.1
RAD9A-209ENST00000544620 FAM135BQ49AJ0 1406 aa28.18■■■□□ 2.1
RAD9A-209ENST00000544620 RIMS2Q9UQ26 1411 aa28.18■■■□□ 2.1
RAD9A-209ENST00000544620 TMEM94Q12767 1356 aa28.17■■■□□ 2.1
RAD9A-209ENST00000544620 BCANQ96GW7 911 aa28.17■■■□□ 2.1
RAD9A-209ENST00000544620 SLC26A8Q96RN1 970 aa28.17■■■□□ 2.1
RAD9A-209ENST00000544620 KCNA6P17658 529 aa28.16■■■□□ 2.1
RAD9A-209ENST00000544620 RGS17Q9UGC6 210 aaPredicted RBP28.16■■■□□ 2.1
RAD9A-209ENST00000544620 PPP1R15AO75807 674 aaPredicted RBP28.15■■■□□ 2.1
RAD9A-209ENST00000544620 PROSER2Q86WR7 435 aaPredicted RBP28.14■■■□□ 2.1
RAD9A-209ENST00000544620 HDGFP51858 240 aaKnown RBP28.13■■■□□ 2.09
RAD9A-209ENST00000544620 PLEKHG1Q9ULL1 1385 aa28.12■■■□□ 2.09
RAD9A-209ENST00000544620 NAIPQ13075 1403 aa28.12■■■□□ 2.09
RAD9A-209ENST00000544620 SPHKAPQ2M3C7 1700 aa28.12■■■□□ 2.09
RAD9A-209ENST00000544620 RBM33Q96EV2 1170 aaKnown RBP28.11■■■□□ 2.09
RAD9A-209ENST00000544620 ROBO1Q9Y6N7 1651 aa28.1■■■□□ 2.09
RAD9A-209ENST00000544620 NWD1Q149M9 1564 aa28.08■■■□□ 2.09
RAD9A-209ENST00000544620 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.08■■■□□ 2.09
RAD9A-209ENST00000544620 NKTRP30414 1462 aaKnown RBP28.05■■■□□ 2.08
RAD9A-209ENST00000544620 NUTM2DQ5VT03 806 aaPredicted RBP28.05■■■□□ 2.08
RAD9A-209ENST00000544620 HFM1A2PYH4 1435 aa28.04■■■□□ 2.08
RAD9A-209ENST00000544620 CHD2O14647 1828 aaKnown RBP28.02■■■□□ 2.08
RAD9A-209ENST00000544620 MSH6P52701 1360 aa28■■■□□ 2.07
RAD9A-209ENST00000544620 POTEAQ6S8J7 498 aa28■■■□□ 2.07
RAD9A-209ENST00000544620 DIP2AQ14689 1571 aa27.99■■■□□ 2.07
RAD9A-209ENST00000544620 TRIM52Q96A61 297 aa27.98■■■□□ 2.07
RAD9A-209ENST00000544620 TBX22Q9Y458 520 aa27.98■■■□□ 2.07
RAD9A-209ENST00000544620 TRPM2O94759 1503 aa27.97■■■□□ 2.07
RAD9A-209ENST00000544620 CLTCL1P53675 1640 aa27.97■■■□□ 2.07
RAD9A-209ENST00000544620 ADAMTS13Q76LX8 1427 aa27.97■■■□□ 2.07
RAD9A-209ENST00000544620 PHLPP1O60346 1717 aa27.96■■■□□ 2.07
RAD9A-209ENST00000544620 SLAIN2Q9P270 581 aa27.96■■■□□ 2.07
RAD9A-209ENST00000544620 ZNF326Q5BKZ1 582 aaKnown RBP27.94■■■□□ 2.06
RAD9A-209ENST00000544620 KIF1BO60333 1816 aa27.91■■■□□ 2.06
RAD9A-209ENST00000544620 PIK3R4Q99570 1358 aa27.89■■■□□ 2.06
RAD9A-209ENST00000544620 JCADQ9P266 1359 aa27.88■■■□□ 2.05
RAD9A-209ENST00000544620 SLC4A1APQ9BWU0 796 aaKnown RBP27.88■■■□□ 2.05
RAD9A-209ENST00000544620 NRXN3Q9Y4C0 1643 aa27.87■■■□□ 2.05
RAD9A-209ENST00000544620 SETBP1Q9Y6X0 1596 aa27.86■■■□□ 2.05
RAD9A-209ENST00000544620 C14orf37Q86TY3 774 aa27.85■■■□□ 2.05
RAD9A-209ENST00000544620 NEXMIFQ5QGS0 1516 aa27.85■■■□□ 2.05
RAD9A-209ENST00000544620 PTPRUQ92729 1446 aa27.82■■■□□ 2.04
RAD9A-209ENST00000544620 NCOA3Q9Y6Q9 1424 aa27.82■■■□□ 2.04
RAD9A-209ENST00000544620 COL16A1Q07092 1604 aaPredicted RBP27.81■■■□□ 2.04
RAD9A-209ENST00000544620 SETD1AO15047 1707 aaKnown RBP27.81■■■□□ 2.04
RAD9A-209ENST00000544620 AMOTL2Q9Y2J4 779 aa27.81■■■□□ 2.04
RAD9A-209ENST00000544620 XRN1Q8IZH2 1706 aaKnown RBP27.78■■■□□ 2.04
RAD9A-209ENST00000544620 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.78■■■□□ 2.04
RAD9A-209ENST00000544620 CADPS2Q86UW7 1296 aa27.76■■■□□ 2.03
RAD9A-209ENST00000544620 ATF3P18847 181 aa27.75■■■□□ 2.03
RAD9A-209ENST00000544620 C19orf44Q9H6X5 657 aa27.75■■■□□ 2.03
RAD9A-209ENST00000544620 SPATA31A6Q5VVP1 1343 aa27.74■■■□□ 2.03
RAD9A-209ENST00000544620 FOXD1Q16676 465 aa27.74■■■□□ 2.03
RAD9A-209ENST00000544620 MEX3CQ5U5Q3 659 aaKnown RBP27.74■■■□□ 2.03
RAD9A-209ENST00000544620 METP08581 1390 aa27.73■■■□□ 2.03
RAD9A-209ENST00000544620 LRP6O75581 1613 aa27.72■■■□□ 2.03
RAD9A-209ENST00000544620 AHDC1Q5TGY3 1603 aaPredicted RBP27.7■■■□□ 2.03
RAD9A-209ENST00000544620 PPLO60437 1756 aa27.7■■■□□ 2.02
RAD9A-209ENST00000544620 SHPRHQ149N8 1683 aa27.69■■■□□ 2.02
RAD9A-209ENST00000544620 VGFO15240 615 aaPredicted RBP27.69■■■□□ 2.02
RAD9A-209ENST00000544620 MPHOSPH9Q99550 1183 aa27.69■■■□□ 2.02
RAD9A-209ENST00000544620 RPGRIP1LQ68CZ1 1315 aa27.68■■■□□ 2.02
RAD9A-209ENST00000544620 ZNF772Q68DY9 489 aaPredicted RBP27.68■■■□□ 2.02
RAD9A-209ENST00000544620 CCDC144AA2RUR9 1427 aa27.67■■■□□ 2.02
RAD9A-209ENST00000544620 SETD5Q9C0A6 1442 aa27.66■■■□□ 2.02
RAD9A-209ENST00000544620 DCCP43146 1447 aa27.64■■■□□ 2.02
RAD9A-209ENST00000544620 BRINP3Q76B58 766 aa27.63■■■□□ 2.01
RAD9A-209ENST00000544620 ACIN1Q9UKV3 1341 aaKnown RBP27.62■■■□□ 2.01
RAD9A-209ENST00000544620 NUTM2BA6NNL0 878 aaPredicted RBP27.6■■■□□ 2.01
RAD9A-209ENST00000544620 NUTM2EB1AL46 878 aaPredicted RBP27.6■■■□□ 2.01
RAD9A-209ENST00000544620 NUTM2AQ8IVF1 878 aaPredicted RBP27.6■■■□□ 2.01
RAD9A-209ENST00000544620 ADGRL3Q9HAR2 1447 aa27.58■■■□□ 2.01
RAD9A-209ENST00000544620 NALCNQ8IZF0 1738 aa27.58■■■□□ 2.01
RAD9A-209ENST00000544620 RGL3Q3MIN7 710 aa27.57■■■□□ 2
RAD9A-209ENST00000544620 UPF1Q92900 1129 aaKnown RBP eCLIP27.57■■■□□ 2
RAD9A-209ENST00000544620 SPATA31E1Q6ZUB1 1445 aa27.57■■■□□ 2
RAD9A-209ENST00000544620 RXRBP28702 533 aa27.56■■■□□ 2
RAD9A-209ENST00000544620 PTCH1Q13635 1447 aa27.56■■■□□ 2
RAD9A-209ENST00000544620 IFT172Q9UG01 1749 aa27.55■■■□□ 2
RAD9A-209ENST00000544620 RAB3GAP2Q9H2M9 1393 aa27.55■■■□□ 2
RAD9A-209ENST00000544620 MST1RQ04912 1400 aa27.55■■■□□ 2
RAD9A-209ENST00000544620 ASXL1Q8IXJ9 1541 aa27.54■■■□□ 2
RAD9A-209ENST00000544620 ROBO2Q9HCK4 1378 aa27.52■■■□□ 2
RAD9A-209ENST00000544620 ADGRF5Q8IZF2 1346 aa27.52■■■□□ 2
RAD9A-209ENST00000544620 NHSL1Q5SYE7 1610 aa27.52■■■□□ 2
RAD9A-209ENST00000544620 ANKRD30BQ9BXX2 1392 aa27.51■■□□□ 1.99
RAD9A-209ENST00000544620 PRAG1Q86YV5 1406 aa27.5■■□□□ 1.99
RAD9A-209ENST00000544620 AFF2P51816 1311 aa27.49■■□□□ 1.99
RAD9A-209ENST00000544620 LRRC59Q96AG4 307 aaKnown RBP27.48■■□□□ 1.99
RAD9A-209ENST00000544620 CDK12Q9NYV4 1490 aaPredicted RBP27.45■■□□□ 1.99
RAD9A-209ENST00000544620 DDX17Q92841 729 aaKnown RBP27.43■■□□□ 1.98
RAD9A-209ENST00000544620 PIK3C2GO75747 1445 aa27.42■■□□□ 1.98
RAD9A-209ENST00000544620 C8orf37Q96NL8 207 aa27.42■■□□□ 1.98
RAD9A-209ENST00000544620 C1orf167Q5SNV9 1468 aa27.41■■□□□ 1.98
RAD9A-209ENST00000544620 STK26Q9P289 416 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms