RNA–Protein interactions for RNA: ENST00000543044.2

AP003108.2-208, humanhuman

TSL 3 BASIC

Gene AP003108.2, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003108.2-208ENST00000543044 ZFYVE9O95405 1425 aa13.73□□□□□ -0.21
AP003108.2-208ENST00000543044 NKTRP30414 1462 aaKnown RBP13.73□□□□□ -0.21
AP003108.2-208ENST00000543044 PLEKHG1Q9ULL1 1385 aa13.72□□□□□ -0.21
AP003108.2-208ENST00000543044 XIRP1Q702N8 1843 aaKnown RBP13.72□□□□□ -0.21
AP003108.2-208ENST00000543044 RIMS2Q9UQ26 1411 aa13.72□□□□□ -0.21
AP003108.2-208ENST00000543044 UNC13BO14795 1591 aa13.71□□□□□ -0.21
AP003108.2-208ENST00000543044 PPP1R15AO75807 674 aaPredicted RBP13.71□□□□□ -0.21
AP003108.2-208ENST00000543044 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.71□□□□□ -0.21
AP003108.2-208ENST00000543044 RBM33Q96EV2 1170 aaKnown RBP13.71□□□□□ -0.21
AP003108.2-208ENST00000543044 NWD1Q149M9 1564 aa13.71□□□□□ -0.22
AP003108.2-208ENST00000543044 TBX22Q9Y458 520 aa13.7□□□□□ -0.22
AP003108.2-208ENST00000543044 TMEM131LA2VDJ0 1609 aa13.69□□□□□ -0.22
AP003108.2-208ENST00000543044 CHGAP10645 457 aaKnown RBP13.69□□□□□ -0.22
AP003108.2-208ENST00000543044 NUP155O75694 1391 aa13.69□□□□□ -0.22
AP003108.2-208ENST00000543044 MSH6P52701 1360 aa13.69□□□□□ -0.22
AP003108.2-208ENST00000543044 GCC2Q8IWJ2 1684 aa13.69□□□□□ -0.22
AP003108.2-208ENST00000543044 SLAIN2Q9P270 581 aa13.67□□□□□ -0.22
AP003108.2-208ENST00000543044 IQGAP3Q86VI3 1631 aa13.66□□□□□ -0.22
AP003108.2-208ENST00000543044 ITGAEP38570 1179 aa13.66□□□□□ -0.22
AP003108.2-208ENST00000543044 E9PCH4 1651 aa13.66□□□□□ -0.22
AP003108.2-208ENST00000543044 NCOA3Q9Y6Q9 1424 aa13.65□□□□□ -0.22
AP003108.2-208ENST00000543044 RGS17Q9UGC6 210 aaPredicted RBP13.65□□□□□ -0.22
AP003108.2-208ENST00000543044 ROBO1Q9Y6N7 1651 aa13.64□□□□□ -0.23
AP003108.2-208ENST00000543044 PIK3R4Q99570 1358 aa13.64□□□□□ -0.23
AP003108.2-208ENST00000543044 ADAMTS13Q76LX8 1427 aa13.64□□□□□ -0.23
AP003108.2-208ENST00000543044 MYO5BQ9ULV0 1848 aa13.63□□□□□ -0.23
AP003108.2-208ENST00000543044 NUTM2DQ5VT03 806 aaPredicted RBP13.63□□□□□ -0.23
AP003108.2-208ENST00000543044 CHD2O14647 1828 aaKnown RBP13.62□□□□□ -0.23
AP003108.2-208ENST00000543044 PPARGC1BQ86YN6 1023 aaKnown RBP13.62□□□□□ -0.23
AP003108.2-208ENST00000543044 DIP2AQ14689 1571 aa13.62□□□□□ -0.23
AP003108.2-208ENST00000543044 C14orf37Q86TY3 774 aa13.61□□□□□ -0.23
AP003108.2-208ENST00000543044 CADPS2Q86UW7 1296 aa13.6□□□□□ -0.23
AP003108.2-208ENST00000543044 C19orf44Q9H6X5 657 aa13.6□□□□□ -0.23
AP003108.2-208ENST00000543044 AMOTL2Q9Y2J4 779 aa13.59□□□□□ -0.23
AP003108.2-208ENST00000543044 JCADQ9P266 1359 aa13.58□□□□□ -0.23
AP003108.2-208ENST00000543044 ATF3P18847 181 aa13.58□□□□□ -0.24
AP003108.2-208ENST00000543044 TRPM2O94759 1503 aa13.58□□□□□ -0.24
AP003108.2-208ENST00000543044 POTEAQ6S8J7 498 aa13.57□□□□□ -0.24
AP003108.2-208ENST00000543044 PTPRUQ92729 1446 aa13.56□□□□□ -0.24
AP003108.2-208ENST00000543044 ZNF326Q5BKZ1 582 aaKnown RBP13.56□□□□□ -0.24
AP003108.2-208ENST00000543044 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
AP003108.2-208ENST00000543044 PHLPP1O60346 1717 aa13.55□□□□□ -0.24
AP003108.2-208ENST00000543044 SETBP1Q9Y6X0 1596 aa13.54□□□□□ -0.24
AP003108.2-208ENST00000543044 SPATA31A6Q5VVP1 1343 aa13.53□□□□□ -0.24
AP003108.2-208ENST00000543044 DCCP43146 1447 aa13.53□□□□□ -0.24
AP003108.2-208ENST00000543044 NAIPQ13075 1403 aa13.53□□□□□ -0.24
AP003108.2-208ENST00000543044 COL16A1Q07092 1604 aaPredicted RBP13.53□□□□□ -0.24
AP003108.2-208ENST00000543044 SPHKAPQ2M3C7 1700 aa13.53□□□□□ -0.24
AP003108.2-208ENST00000543044 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.53□□□□□ -0.24
AP003108.2-208ENST00000543044 AHDC1Q5TGY3 1603 aaPredicted RBP13.51□□□□□ -0.25
AP003108.2-208ENST00000543044 NRXN3Q9Y4C0 1643 aa13.51□□□□□ -0.25
AP003108.2-208ENST00000543044 METP08581 1390 aa13.51□□□□□ -0.25
AP003108.2-208ENST00000543044 BRINP3Q76B58 766 aa13.51□□□□□ -0.25
AP003108.2-208ENST00000543044 XRN1Q8IZH2 1706 aaKnown RBP13.49□□□□□ -0.25
AP003108.2-208ENST00000543044 NEXMIFQ5QGS0 1516 aa13.49□□□□□ -0.25
AP003108.2-208ENST00000543044 VGFO15240 615 aaPredicted RBP13.48□□□□□ -0.25
AP003108.2-208ENST00000543044 MEX3CQ5U5Q3 659 aaKnown RBP13.48□□□□□ -0.25
AP003108.2-208ENST00000543044 TRIM52Q96A61 297 aa13.48□□□□□ -0.25
AP003108.2-208ENST00000543044 CLTCL1P53675 1640 aa13.48□□□□□ -0.25
AP003108.2-208ENST00000543044 HFM1A2PYH4 1435 aa13.47□□□□□ -0.25
AP003108.2-208ENST00000543044 LRP6O75581 1613 aa13.47□□□□□ -0.25
AP003108.2-208ENST00000543044 ZNF772Q68DY9 489 aaPredicted RBP13.47□□□□□ -0.25
AP003108.2-208ENST00000543044 MST1RQ04912 1400 aa13.47□□□□□ -0.25
AP003108.2-208ENST00000543044 SLC4A1APQ9BWU0 796 aaKnown RBP13.46□□□□□ -0.25
AP003108.2-208ENST00000543044 ADGRL3Q9HAR2 1447 aa13.46□□□□□ -0.26
AP003108.2-208ENST00000543044 RPGRIP1LQ68CZ1 1315 aa13.45□□□□□ -0.26
AP003108.2-208ENST00000543044 ASXL1Q8IXJ9 1541 aa13.45□□□□□ -0.26
AP003108.2-208ENST00000543044 SETD5Q9C0A6 1442 aa13.45□□□□□ -0.26
AP003108.2-208ENST00000543044 SHPRHQ149N8 1683 aa13.44□□□□□ -0.26
AP003108.2-208ENST00000543044 LRRC59Q96AG4 307 aaKnown RBP13.44□□□□□ -0.26
AP003108.2-208ENST00000543044 PTCH1Q13635 1447 aa13.42□□□□□ -0.26
AP003108.2-208ENST00000543044 KIF1BO60333 1816 aa13.42□□□□□ -0.26
AP003108.2-208ENST00000543044 NUTM2BA6NNL0 878 aaPredicted RBP13.42□□□□□ -0.26
AP003108.2-208ENST00000543044 NUTM2EB1AL46 878 aaPredicted RBP13.42□□□□□ -0.26
AP003108.2-208ENST00000543044 NUTM2AQ8IVF1 878 aaPredicted RBP13.42□□□□□ -0.26
AP003108.2-208ENST00000543044 ROBO2Q9HCK4 1378 aa13.41□□□□□ -0.26
AP003108.2-208ENST00000543044 PRAG1Q86YV5 1406 aa13.4□□□□□ -0.26
AP003108.2-208ENST00000543044 NHSL1Q5SYE7 1610 aa13.39□□□□□ -0.27
AP003108.2-208ENST00000543044 RXRBP28702 533 aa13.39□□□□□ -0.27
AP003108.2-208ENST00000543044 DDX17Q92841 729 aaKnown RBP13.39□□□□□ -0.27
AP003108.2-208ENST00000543044 C1orf167Q5SNV9 1468 aa13.39□□□□□ -0.27
AP003108.2-208ENST00000543044 PNPLA6Q8IY17 1366 aa13.38□□□□□ -0.27
AP003108.2-208ENST00000543044 NALCNQ8IZF0 1738 aa13.38□□□□□ -0.27
AP003108.2-208ENST00000543044 AFF2P51816 1311 aa13.38□□□□□ -0.27
AP003108.2-208ENST00000543044 FOXD1Q16676 465 aa13.37□□□□□ -0.27
AP003108.2-208ENST00000543044 SETD1AO15047 1707 aaKnown RBP13.36□□□□□ -0.27
AP003108.2-208ENST00000543044 ORAI2Q96SN7 254 aa13.36□□□□□ -0.27
AP003108.2-208ENST00000543044 CCDC144AA2RUR9 1427 aa13.36□□□□□ -0.27
AP003108.2-208ENST00000543044 SOS2Q07890 1332 aaPredicted RBP13.36□□□□□ -0.27
AP003108.2-208ENST00000543044 C8orf37Q96NL8 207 aa13.35□□□□□ -0.27
AP003108.2-208ENST00000543044 MPHOSPH9Q99550 1183 aa13.35□□□□□ -0.27
AP003108.2-208ENST00000543044 CDK12Q9NYV4 1490 aaPredicted RBP13.35□□□□□ -0.27
AP003108.2-208ENST00000543044 UPF1Q92900 1129 aaKnown RBP eCLIP13.34□□□□□ -0.271e-6■■■□□ 16.4
AP003108.2-208ENST00000543044 ADGRF5Q8IZF2 1346 aa13.34□□□□□ -0.27
AP003108.2-208ENST00000543044 ANKRD30BQ9BXX2 1392 aa13.33□□□□□ -0.27
AP003108.2-208ENST00000543044 PPLO60437 1756 aa13.33□□□□□ -0.28
AP003108.2-208ENST00000543044 SPATA31E1Q6ZUB1 1445 aa13.33□□□□□ -0.28
AP003108.2-208ENST00000543044 LAMC1P11047 1609 aa13.33□□□□□ -0.28
AP003108.2-208ENST00000543044 RGL3Q3MIN7 710 aa13.33□□□□□ -0.28
AP003108.2-208ENST00000543044 QTRT2Q9H974 415 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms