RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 MRE11P49959 708 aa17.11■□□□□ 0.33
TRPM1-203ENST00000542188 LETM1O95202 739 aaPredicted RBP17.11■□□□□ 0.33
TRPM1-203ENST00000542188 RNF20Q5VTR2 975 aa17.11■□□□□ 0.33
TRPM1-203ENST00000542188 KIAA0754O94854 1291 aa17.1■□□□□ 0.33
TRPM1-203ENST00000542188 USP8P40818 1118 aa17.1■□□□□ 0.33
TRPM1-203ENST00000542188 SLC4A3P48751 1232 aa17.1■□□□□ 0.33
TRPM1-203ENST00000542188 CGNL1Q0VF96 1302 aa17.1■□□□□ 0.33
TRPM1-203ENST00000542188 TRIM34Q9BYJ4 488 aa17.09■□□□□ 0.33
TRPM1-203ENST00000542188 TERF2IPQ9NYB0 399 aa17.09■□□□□ 0.33
TRPM1-203ENST00000542188 CCDC43Q96MW1 224 aaKnown RBP17.08■□□□□ 0.33
TRPM1-203ENST00000542188 NLRP13Q86W25 1043 aa17.08■□□□□ 0.32
TRPM1-203ENST00000542188 ANKRD18AQ8IVF6 992 aa17.08■□□□□ 0.32
TRPM1-203ENST00000542188 HMGN5P82970 282 aaKnown RBP17.08■□□□□ 0.32
TRPM1-203ENST00000542188 STK26Q9P289 416 aa17.08■□□□□ 0.32
TRPM1-203ENST00000542188 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.32
TRPM1-203ENST00000542188 EPS15P42566 896 aa17.08■□□□□ 0.32
TRPM1-203ENST00000542188 SMC3Q9UQE7 1217 aa17.07■□□□□ 0.32
TRPM1-203ENST00000542188 OFD1O75665 1012 aa17.07■□□□□ 0.32
TRPM1-203ENST00000542188 ERLIN2O94905 339 aa17.07■□□□□ 0.32
TRPM1-203ENST00000542188 SAFBQ15424 915 aaKnown RBP eCLIP17.06■□□□□ 0.32
TRPM1-203ENST00000542188 AXDND1Q5T1B0 1012 aaPredicted RBP17.06■□□□□ 0.32
TRPM1-203ENST00000542188 GTF2E1P29083 439 aaPredicted RBP17.06■□□□□ 0.32
TRPM1-203ENST00000542188 ZKSCAN2Q63HK3 967 aa17.06■□□□□ 0.32
TRPM1-203ENST00000542188 TRDNQ13061 729 aa17.06■□□□□ 0.32
TRPM1-203ENST00000542188 DHX8Q14562 1220 aaKnown RBP17.06■□□□□ 0.32
TRPM1-203ENST00000542188 CCDC146Q8IYE0 955 aa17.06■□□□□ 0.32
TRPM1-203ENST00000542188 SMARCE1Q969G3 411 aa17.06■□□□□ 0.32
TRPM1-203ENST00000542188 NASPP49321 788 aaPredicted RBP17.05■□□□□ 0.32
TRPM1-203ENST00000542188 PDILTQ8N807 584 aa17.05■□□□□ 0.32
TRPM1-203ENST00000542188 PODXL2Q9NZ53 605 aa17.05■□□□□ 0.32
TRPM1-203ENST00000542188 KIF27Q86VH2 1401 aa17.05■□□□□ 0.32
TRPM1-203ENST00000542188 ERICH2A1L162 156 aa17.05■□□□□ 0.32
TRPM1-203ENST00000542188 GOLGA6L10A6NI86 522 aa17.05■□□□□ 0.32
TRPM1-203ENST00000542188 CT47B1P0C2W7 299 aaPredicted RBP17.04■□□□□ 0.32
TRPM1-203ENST00000542188 ZFYVE27Q5T4F4 411 aa17.04■□□□□ 0.32
TRPM1-203ENST00000542188 VPS37CA5D8V6 355 aaPredicted RBP17.03■□□□□ 0.32
TRPM1-203ENST00000542188 NFXL1Q6ZNB6 911 aa17.02■□□□□ 0.32
TRPM1-203ENST00000542188 TAF3Q5VWG9 929 aa17.02■□□□□ 0.32
TRPM1-203ENST00000542188 KIF15Q9NS87 1388 aa17.01■□□□□ 0.31
TRPM1-203ENST00000542188 DHX16O60231 1041 aaKnown RBP17.01■□□□□ 0.31
TRPM1-203ENST00000542188 ROCK1Q13464 1354 aa17.01■□□□□ 0.31
TRPM1-203ENST00000542188 E9PSI1 815 aa17.01■□□□□ 0.31
TRPM1-203ENST00000542188 RABEP1Q15276 862 aa17.01■□□□□ 0.31
TRPM1-203ENST00000542188 INTS3Q68E01 1043 aaKnown RBP17.01■□□□□ 0.31
TRPM1-203ENST00000542188 DYDC1Q8WWB3 177 aa17.01■□□□□ 0.31
TRPM1-203ENST00000542188 FBXW7Q969H0 707 aa17.01■□□□□ 0.31
TRPM1-203ENST00000542188 RRP1P56182 461 aaKnown RBP17.01■□□□□ 0.31
TRPM1-203ENST00000542188 BRMS1Q9HCU9 246 aa17.01■□□□□ 0.31
TRPM1-203ENST00000542188 NEFHP12036 1026 aa17■□□□□ 0.31
TRPM1-203ENST00000542188 PKD2Q13563 968 aa17■□□□□ 0.31
TRPM1-203ENST00000542188 EIF3JO75822 258 aaKnown RBP17■□□□□ 0.31
TRPM1-203ENST00000542188 FILIP1LQ4L180 1135 aa17■□□□□ 0.31
TRPM1-203ENST00000542188 IFIT2P09913 472 aaKnown RBP16.99■□□□□ 0.31
TRPM1-203ENST00000542188 DEF6Q9H4E7 631 aa16.99■□□□□ 0.31
TRPM1-203ENST00000542188 SEPT7Q16181 437 aaKnown RBP16.99■□□□□ 0.31
TRPM1-203ENST00000542188 SKIDA1Q1XH10 827 aa16.99■□□□□ 0.31
TRPM1-203ENST00000542188 CCDC9Q9Y3X0 531 aaKnown RBP16.99■□□□□ 0.31
TRPM1-203ENST00000542188 KIF7Q2M1P5 1343 aa16.99■□□□□ 0.31
TRPM1-203ENST00000542188 DDX19BQ9UMR2 479 aa16.98■□□□□ 0.31
TRPM1-203ENST00000542188 MYBBP1AQ9BQG0 1328 aaKnown RBP16.98■□□□□ 0.31
TRPM1-203ENST00000542188 EZRP15311 586 aaKnown RBP16.98■□□□□ 0.31
TRPM1-203ENST00000542188 RAD21O60216 631 aa16.98■□□□□ 0.31
TRPM1-203ENST00000542188 ARHGAP35Q9NRY4 1499 aa16.98■□□□□ 0.31
TRPM1-203ENST00000542188 ERLIN1O75477 346 aa16.98■□□□□ 0.31
TRPM1-203ENST00000542188 AMPHP49418 695 aa16.98■□□□□ 0.31
TRPM1-203ENST00000542188 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.97■□□□□ 0.31
TRPM1-203ENST00000542188 PIP4K2AP48426 406 aaPredicted RBP16.97■□□□□ 0.31
TRPM1-203ENST00000542188 TXLNBQ8N3L3 684 aa16.97■□□□□ 0.31
TRPM1-203ENST00000542188 CAVIN1Q6NZI2 390 aaKnown RBP16.97■□□□□ 0.31
TRPM1-203ENST00000542188 CRBNQ96SW2 442 aa16.97■□□□□ 0.31
TRPM1-203ENST00000542188 TSPY26PQ9H489 355 aa16.97■□□□□ 0.31
TRPM1-203ENST00000542188 TRIM5Q9C035 493 aa16.96■□□□□ 0.31
TRPM1-203ENST00000542188 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.96■□□□□ 0.31
TRPM1-203ENST00000542188 XBP1P17861 261 aa16.96■□□□□ 0.31
TRPM1-203ENST00000542188 MAGEC2Q9UBF1 373 aaPredicted RBP16.96■□□□□ 0.31
TRPM1-203ENST00000542188 TTLL5Q6EMB2 1281 aa16.95■□□□□ 0.3
TRPM1-203ENST00000542188 MBD3O95983 291 aa16.95■□□□□ 0.3
TRPM1-203ENST00000542188 ENOX2Q16206 610 aaKnown RBP16.95■□□□□ 0.3
TRPM1-203ENST00000542188 SMC2O95347 1197 aa16.95■□□□□ 0.3
TRPM1-203ENST00000542188 EXOC6Q8TAG9 804 aa16.94■□□□□ 0.3
TRPM1-203ENST00000542188 SYCP1Q15431 976 aa16.93■□□□□ 0.3
TRPM1-203ENST00000542188 SDF4Q9BRK5 362 aa16.93■□□□□ 0.3
TRPM1-203ENST00000542188 ANKRD62A6NC57 917 aa16.93■□□□□ 0.3
TRPM1-203ENST00000542188 GIMAP7Q8NHV1 300 aa16.93■□□□□ 0.3
TRPM1-203ENST00000542188 BCL11BQ9C0K0 894 aaPredicted RBP16.93■□□□□ 0.3
TRPM1-203ENST00000542188 LUC7LQ9NQ29 371 aaKnown RBP16.93■□□□□ 0.3
TRPM1-203ENST00000542188 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
TRPM1-203ENST00000542188 ERC2O15083 957 aa16.92■□□□□ 0.3
TRPM1-203ENST00000542188 NFKBIBQ15653 356 aa16.92■□□□□ 0.3
TRPM1-203ENST00000542188 HSP90AB4PQ58FF6 505 aa16.92■□□□□ 0.3
TRPM1-203ENST00000542188 API5Q9BZZ5 524 aaKnown RBP16.92■□□□□ 0.3
TRPM1-203ENST00000542188 C9orf78Q9NZ63 289 aaPredicted RBP16.91■□□□□ 0.3
TRPM1-203ENST00000542188 C1orf141Q5JVX7 400 aa16.91■□□□□ 0.3
TRPM1-203ENST00000542188 ZNHIT6Q9NWK9 470 aaKnown RBP16.91■□□□□ 0.3
TRPM1-203ENST00000542188 IQCEQ6IPM2 695 aa16.91■□□□□ 0.3
TRPM1-203ENST00000542188 PSMA5P28066 241 aa16.91■□□□□ 0.3
TRPM1-203ENST00000542188 C22orf23Q9BZE7 217 aa16.9■□□□□ 0.3
TRPM1-203ENST00000542188 MLECQ14165 292 aa16.9■□□□□ 0.3
TRPM1-203ENST00000542188 CLASRPQ8N2M8 674 aaKnown RBP16.9■□□□□ 0.3
TRPM1-203ENST00000542188 CCDC181Q5TID7 509 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms