RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 TMEM94Q12767 1356 aa22.86■■□□□ 1.25
ITM2C-208ENST00000541852 TBX22Q9Y458 520 aa22.83■■□□□ 1.25
ITM2C-208ENST00000541852 PLEKHG1Q9ULL1 1385 aa22.83■■□□□ 1.25
ITM2C-208ENST00000541852 XIRP1Q702N8 1843 aaKnown RBP22.82■■□□□ 1.24
ITM2C-208ENST00000541852 GCC2Q8IWJ2 1684 aa22.81■■□□□ 1.24
ITM2C-208ENST00000541852 NKTRP30414 1462 aaKnown RBP22.81■■□□□ 1.24
ITM2C-208ENST00000541852 SENP3Q9H4L4 574 aaPredicted RBP22.81■■□□□ 1.24
ITM2C-208ENST00000541852 ZFYVE9O95405 1425 aa22.81■■□□□ 1.24
ITM2C-208ENST00000541852 RIMS2Q9UQ26 1411 aa22.81■■□□□ 1.24
ITM2C-208ENST00000541852 UNC13BO14795 1591 aa22.8■■□□□ 1.24
ITM2C-208ENST00000541852 CHGAP10645 457 aaKnown RBP22.8■■□□□ 1.24
ITM2C-208ENST00000541852 NUP155O75694 1391 aa22.79■■□□□ 1.24
ITM2C-208ENST00000541852 MSH6P52701 1360 aa22.78■■□□□ 1.24
ITM2C-208ENST00000541852 TMEM131LA2VDJ0 1609 aa22.77■■□□□ 1.24
ITM2C-208ENST00000541852 NCOA3Q9Y6Q9 1424 aa22.76■■□□□ 1.23
ITM2C-208ENST00000541852 ITGAEP38570 1179 aa22.76■■□□□ 1.23
ITM2C-208ENST00000541852 SLAIN2Q9P270 581 aa22.76■■□□□ 1.23
ITM2C-208ENST00000541852 NWD1Q149M9 1564 aa22.75■■□□□ 1.23
ITM2C-208ENST00000541852 PIK3R4Q99570 1358 aa22.74■■□□□ 1.23
ITM2C-208ENST00000541852 IQGAP3Q86VI3 1631 aa22.73■■□□□ 1.23
ITM2C-208ENST00000541852 RBM33Q96EV2 1170 aaKnown RBP22.73■■□□□ 1.23
ITM2C-208ENST00000541852 CHD2O14647 1828 aaKnown RBP22.72■■□□□ 1.23
ITM2C-208ENST00000541852 MYO5BQ9ULV0 1848 aa22.72■■□□□ 1.23
ITM2C-208ENST00000541852 E9PCH4 1651 aa22.71■■□□□ 1.23
ITM2C-208ENST00000541852 C19orf44Q9H6X5 657 aa22.68■■□□□ 1.22
ITM2C-208ENST00000541852 C14orf37Q86TY3 774 aa22.67■■□□□ 1.22
ITM2C-208ENST00000541852 CADPS2Q86UW7 1296 aa22.67■■□□□ 1.22
ITM2C-208ENST00000541852 DIP2AQ14689 1571 aa22.67■■□□□ 1.22
ITM2C-208ENST00000541852 ROBO1Q9Y6N7 1651 aa22.66■■□□□ 1.22
ITM2C-208ENST00000541852 PPARGC1BQ86YN6 1023 aaKnown RBP22.66■■□□□ 1.22
ITM2C-208ENST00000541852 NUTM2DQ5VT03 806 aaPredicted RBP22.65■■□□□ 1.22
ITM2C-208ENST00000541852 ADAMTS13Q76LX8 1427 aa22.65■■□□□ 1.22
ITM2C-208ENST00000541852 ATF3P18847 181 aa22.64■■□□□ 1.21
ITM2C-208ENST00000541852 AMOTL2Q9Y2J4 779 aa22.63■■□□□ 1.21
ITM2C-208ENST00000541852 RGS17Q9UGC6 210 aaPredicted RBP22.62■■□□□ 1.21
ITM2C-208ENST00000541852 ZNF326Q5BKZ1 582 aaKnown RBP22.61■■□□□ 1.21
ITM2C-208ENST00000541852 JCADQ9P266 1359 aa22.6■■□□□ 1.21
ITM2C-208ENST00000541852 TRPM2O94759 1503 aa22.59■■□□□ 1.21
ITM2C-208ENST00000541852 RRBP1Q9P2E9 1410 aaKnown RBP22.57■■□□□ 1.2
ITM2C-208ENST00000541852 PHLPP1O60346 1717 aa22.54■■□□□ 1.2
ITM2C-208ENST00000541852 SPHKAPQ2M3C7 1700 aa22.54■■□□□ 1.2
ITM2C-208ENST00000541852 SPATA31A6Q5VVP1 1343 aa22.53■■□□□ 1.2
ITM2C-208ENST00000541852 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.51■■□□□ 1.19
ITM2C-208ENST00000541852 DCCP43146 1447 aa22.51■■□□□ 1.19
ITM2C-208ENST00000541852 NAIPQ13075 1403 aa22.51■■□□□ 1.19
ITM2C-208ENST00000541852 VGFO15240 615 aaPredicted RBP22.51■■□□□ 1.19
ITM2C-208ENST00000541852 SETBP1Q9Y6X0 1596 aa22.5■■□□□ 1.19
ITM2C-208ENST00000541852 PTPRUQ92729 1446 aa22.5■■□□□ 1.19
ITM2C-208ENST00000541852 POTEAQ6S8J7 498 aa22.5■■□□□ 1.19
ITM2C-208ENST00000541852 TRIM52Q96A61 297 aa22.5■■□□□ 1.19
ITM2C-208ENST00000541852 RPGRIP1LQ68CZ1 1315 aa22.47■■□□□ 1.19
ITM2C-208ENST00000541852 BRINP3Q76B58 766 aa22.46■■□□□ 1.19
ITM2C-208ENST00000541852 SLC4A1APQ9BWU0 796 aaKnown RBP22.45■■□□□ 1.18
ITM2C-208ENST00000541852 HFM1A2PYH4 1435 aa22.44■■□□□ 1.18
ITM2C-208ENST00000541852 METP08581 1390 aa22.44■■□□□ 1.18
ITM2C-208ENST00000541852 COL16A1Q07092 1604 aaPredicted RBP22.44■■□□□ 1.18
ITM2C-208ENST00000541852 AHDC1Q5TGY3 1603 aaPredicted RBP22.44■■□□□ 1.18
ITM2C-208ENST00000541852 MEX3CQ5U5Q3 659 aaKnown RBP22.44■■□□□ 1.18
ITM2C-208ENST00000541852 ZNF772Q68DY9 489 aaPredicted RBP22.44■■□□□ 1.18
ITM2C-208ENST00000541852 KIF1BO60333 1816 aa22.43■■□□□ 1.18
ITM2C-208ENST00000541852 NRXN3Q9Y4C0 1643 aa22.42■■□□□ 1.18
ITM2C-208ENST00000541852 XRN1Q8IZH2 1706 aaKnown RBP22.41■■□□□ 1.18
ITM2C-208ENST00000541852 LRRC59Q96AG4 307 aaKnown RBP22.41■■□□□ 1.18
ITM2C-208ENST00000541852 CLTCL1P53675 1640 aa22.41■■□□□ 1.18
ITM2C-208ENST00000541852 NEXMIFQ5QGS0 1516 aa22.4■■□□□ 1.18
ITM2C-208ENST00000541852 ACIN1Q9UKV3 1341 aaKnown RBP22.39■■□□□ 1.18
ITM2C-208ENST00000541852 ADGRL3Q9HAR2 1447 aa22.37■■□□□ 1.17
ITM2C-208ENST00000541852 MST1RQ04912 1400 aa22.36■■□□□ 1.17
ITM2C-208ENST00000541852 SHPRHQ149N8 1683 aa22.36■■□□□ 1.17
ITM2C-208ENST00000541852 SETD5Q9C0A6 1442 aa22.35■■□□□ 1.17
ITM2C-208ENST00000541852 ASXL1Q8IXJ9 1541 aa22.33■■□□□ 1.17
ITM2C-208ENST00000541852 PTCH1Q13635 1447 aa22.31■■□□□ 1.16
ITM2C-208ENST00000541852 NUTM2BA6NNL0 878 aaPredicted RBP22.31■■□□□ 1.16
ITM2C-208ENST00000541852 NUTM2EB1AL46 878 aaPredicted RBP22.31■■□□□ 1.16
ITM2C-208ENST00000541852 NUTM2AQ8IVF1 878 aaPredicted RBP22.31■■□□□ 1.16
ITM2C-208ENST00000541852 LRP6O75581 1613 aa22.3■■□□□ 1.16
ITM2C-208ENST00000541852 RXRBP28702 533 aa22.29■■□□□ 1.16
ITM2C-208ENST00000541852 PRAG1Q86YV5 1406 aa22.28■■□□□ 1.16
ITM2C-208ENST00000541852 MPHOSPH9Q99550 1183 aa22.26■■□□□ 1.15
ITM2C-208ENST00000541852 NHSL1Q5SYE7 1610 aa22.26■■□□□ 1.15
ITM2C-208ENST00000541852 C1orf167Q5SNV9 1468 aa22.26■■□□□ 1.15
ITM2C-208ENST00000541852 ROBO2Q9HCK4 1378 aa22.25■■□□□ 1.15
ITM2C-208ENST00000541852 CCDC144AA2RUR9 1427 aa22.25■■□□□ 1.15
ITM2C-208ENST00000541852 ANKRD30BQ9BXX2 1392 aa22.25■■□□□ 1.15
ITM2C-208ENST00000541852 NALCNQ8IZF0 1738 aa22.23■■□□□ 1.15
ITM2C-208ENST00000541852 FOXD1Q16676 465 aa22.22■■□□□ 1.15
ITM2C-208ENST00000541852 RGL3Q3MIN7 710 aa22.22■■□□□ 1.15
ITM2C-208ENST00000541852 AFF2P51816 1311 aa22.22■■□□□ 1.15
ITM2C-208ENST00000541852 SOS2Q07890 1332 aaPredicted RBP22.22■■□□□ 1.15
ITM2C-208ENST00000541852 PPLO60437 1756 aa22.22■■□□□ 1.15
ITM2C-208ENST00000541852 DDX17Q92841 729 aaKnown RBP22.21■■□□□ 1.15
ITM2C-208ENST00000541852 PNPLA6Q8IY17 1366 aa22.21■■□□□ 1.15
ITM2C-208ENST00000541852 SETD1AO15047 1707 aaKnown RBP22.2■■□□□ 1.14
ITM2C-208ENST00000541852 ORAI2Q96SN7 254 aa22.2■■□□□ 1.14
ITM2C-208ENST00000541852 C8orf37Q96NL8 207 aa22.19■■□□□ 1.14
ITM2C-208ENST00000541852 CDK12Q9NYV4 1490 aaPredicted RBP22.19■■□□□ 1.14
ITM2C-208ENST00000541852 ADGRF5Q8IZF2 1346 aa22.18■■□□□ 1.14
ITM2C-208ENST00000541852 NGLY1Q96IV0 654 aa22.18■■□□□ 1.14
ITM2C-208ENST00000541852 QTRT2Q9H974 415 aaKnown RBP22.18■■□□□ 1.14
ITM2C-208ENST00000541852 RBM6P78332 1123 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms