RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 ROBO1Q9Y6N7 1651 aa20.36■□□□□ 0.85
SCARB1-207ENST00000541661 ZFYVE9O95405 1425 aa20.35■□□□□ 0.85
SCARB1-207ENST00000541661 MYO5BQ9ULV0 1848 aa20.34■□□□□ 0.85
SCARB1-207ENST00000541661 CHD2O14647 1828 aaKnown RBP20.34■□□□□ 0.85
SCARB1-207ENST00000541661 FAM50AQ14320 339 aaKnown RBP20.33■□□□□ 0.85
SCARB1-207ENST00000541661 PLEKHG1Q9ULL1 1385 aa20.33■□□□□ 0.84
SCARB1-207ENST00000541661 RBM33Q96EV2 1170 aaKnown RBP20.32■□□□□ 0.84
SCARB1-207ENST00000541661 GCC2Q8IWJ2 1684 aa20.32■□□□□ 0.84
SCARB1-207ENST00000541661 TMEM131LA2VDJ0 1609 aa20.31■□□□□ 0.84
SCARB1-207ENST00000541661 HDGFP51858 240 aaKnown RBP20.31■□□□□ 0.84
SCARB1-207ENST00000541661 BCANQ96GW7 911 aa20.3■□□□□ 0.84
SCARB1-207ENST00000541661 MSH6P52701 1360 aa20.3■□□□□ 0.84
SCARB1-207ENST00000541661 UNC13BO14795 1591 aa20.29■□□□□ 0.84
SCARB1-207ENST00000541661 RIMS2Q9UQ26 1411 aa20.29■□□□□ 0.84
SCARB1-207ENST00000541661 SLAIN2Q9P270 581 aa20.28■□□□□ 0.84
SCARB1-207ENST00000541661 TBX22Q9Y458 520 aa20.28■□□□□ 0.84
SCARB1-207ENST00000541661 NCOA3Q9Y6Q9 1424 aa20.26■□□□□ 0.83
SCARB1-207ENST00000541661 PHLPP1O60346 1717 aa20.25■□□□□ 0.83
SCARB1-207ENST00000541661 PPP1R15AO75807 674 aaPredicted RBP20.25■□□□□ 0.83
SCARB1-207ENST00000541661 POTEAQ6S8J7 498 aa20.25■□□□□ 0.83
SCARB1-207ENST00000541661 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.25■□□□□ 0.83
SCARB1-207ENST00000541661 E9PCH4 1651 aa20.25■□□□□ 0.83
SCARB1-207ENST00000541661 ROCK1Q13464 1354 aa20.23■□□□□ 0.83
SCARB1-207ENST00000541661 IQGAP3Q86VI3 1631 aa20.22■□□□□ 0.83
SCARB1-207ENST00000541661 ADAMTS13Q76LX8 1427 aa20.21■□□□□ 0.83
SCARB1-207ENST00000541661 DIP2AQ14689 1571 aa20.21■□□□□ 0.83
SCARB1-207ENST00000541661 PIK3R4Q99570 1358 aa20.21■□□□□ 0.83
SCARB1-207ENST00000541661 JCADQ9P266 1359 aa20.21■□□□□ 0.83
SCARB1-207ENST00000541661 COL16A1Q07092 1604 aaPredicted RBP20.19■□□□□ 0.82
SCARB1-207ENST00000541661 CHGAP10645 457 aaKnown RBP20.18■□□□□ 0.82
SCARB1-207ENST00000541661 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.16■□□□□ 0.82
SCARB1-207ENST00000541661 C19orf44Q9H6X5 657 aa20.16■□□□□ 0.82
SCARB1-207ENST00000541661 NUP155O75694 1391 aa20.14■□□□□ 0.81
SCARB1-207ENST00000541661 NUTM2DQ5VT03 806 aaPredicted RBP20.14■□□□□ 0.81
SCARB1-207ENST00000541661 CADPS2Q86UW7 1296 aa20.14■□□□□ 0.81
SCARB1-207ENST00000541661 TRPM2O94759 1503 aa20.13■□□□□ 0.81
SCARB1-207ENST00000541661 AHDC1Q5TGY3 1603 aaPredicted RBP20.13■□□□□ 0.81
SCARB1-207ENST00000541661 SPATA31A6Q5VVP1 1343 aa20.12■□□□□ 0.81
SCARB1-207ENST00000541661 C14orf37Q86TY3 774 aa20.12■□□□□ 0.81
SCARB1-207ENST00000541661 ATF3P18847 181 aa20.11■□□□□ 0.81
SCARB1-207ENST00000541661 PTPRUQ92729 1446 aa20.1■□□□□ 0.81
SCARB1-207ENST00000541661 AMOTL2Q9Y2J4 779 aa20.1■□□□□ 0.81
SCARB1-207ENST00000541661 SHPRHQ149N8 1683 aa20.1■□□□□ 0.81
SCARB1-207ENST00000541661 LRP6O75581 1613 aa20.09■□□□□ 0.81
SCARB1-207ENST00000541661 NRXN3Q9Y4C0 1643 aa20.08■□□□□ 0.8
SCARB1-207ENST00000541661 DCCP43146 1447 aa20.07■□□□□ 0.8
SCARB1-207ENST00000541661 SETBP1Q9Y6X0 1596 aa20.07■□□□□ 0.8
SCARB1-207ENST00000541661 SETD1AO15047 1707 aaKnown RBP20.07■□□□□ 0.8
SCARB1-207ENST00000541661 SPHKAPQ2M3C7 1700 aa20.07■□□□□ 0.8
SCARB1-207ENST00000541661 XRN1Q8IZH2 1706 aaKnown RBP20.06■□□□□ 0.8
SCARB1-207ENST00000541661 BRINP3Q76B58 766 aa20.05■□□□□ 0.8
SCARB1-207ENST00000541661 ZNF772Q68DY9 489 aaPredicted RBP20.04■□□□□ 0.8
SCARB1-207ENST00000541661 ITGAEP38570 1179 aa20.03■□□□□ 0.8
SCARB1-207ENST00000541661 MEX3CQ5U5Q3 659 aaKnown RBP20.02■□□□□ 0.8
SCARB1-207ENST00000541661 METP08581 1390 aa19.99■□□□□ 0.79
SCARB1-207ENST00000541661 ASXL1Q8IXJ9 1541 aa19.99■□□□□ 0.79
SCARB1-207ENST00000541661 MST1RQ04912 1400 aa19.99■□□□□ 0.79
SCARB1-207ENST00000541661 SETD5Q9C0A6 1442 aa19.99■□□□□ 0.79
SCARB1-207ENST00000541661 NHSL1Q5SYE7 1610 aa19.98■□□□□ 0.79
SCARB1-207ENST00000541661 ZNF326Q5BKZ1 582 aaKnown RBP19.98■□□□□ 0.79
SCARB1-207ENST00000541661 NEXMIFQ5QGS0 1516 aa19.97■□□□□ 0.79
SCARB1-207ENST00000541661 CLTCL1P53675 1640 aa19.96■□□□□ 0.79
SCARB1-207ENST00000541661 ADGRL3Q9HAR2 1447 aa19.94■□□□□ 0.78
SCARB1-207ENST00000541661 UPF1Q92900 1129 aaKnown RBP eCLIP19.94■□□□□ 0.78
SCARB1-207ENST00000541661 LRRC59Q96AG4 307 aaKnown RBP19.94■□□□□ 0.78
SCARB1-207ENST00000541661 KIF1BO60333 1816 aa19.94■□□□□ 0.78
SCARB1-207ENST00000541661 RXRBP28702 533 aa19.93■□□□□ 0.78
SCARB1-207ENST00000541661 CDK12Q9NYV4 1490 aaPredicted RBP19.92■□□□□ 0.78
SCARB1-207ENST00000541661 NUTM2BA6NNL0 878 aaPredicted RBP19.92■□□□□ 0.78
SCARB1-207ENST00000541661 NUTM2EB1AL46 878 aaPredicted RBP19.92■□□□□ 0.78
SCARB1-207ENST00000541661 PPARGC1BQ86YN6 1023 aaKnown RBP19.92■□□□□ 0.78
SCARB1-207ENST00000541661 NUTM2AQ8IVF1 878 aaPredicted RBP19.92■□□□□ 0.78
SCARB1-207ENST00000541661 TRIM52Q96A61 297 aa19.92■□□□□ 0.78
SCARB1-207ENST00000541661 NALCNQ8IZF0 1738 aa19.92■□□□□ 0.78
SCARB1-207ENST00000541661 AFF2P51816 1311 aa19.89■□□□□ 0.77
SCARB1-207ENST00000541661 NAIPQ13075 1403 aa19.89■□□□□ 0.77
SCARB1-207ENST00000541661 RRBP1Q9P2E9 1410 aaKnown RBP19.89■□□□□ 0.77
SCARB1-207ENST00000541661 LAMC1P11047 1609 aa19.88■□□□□ 0.77
SCARB1-207ENST00000541661 PNPLA6Q8IY17 1366 aa19.87■□□□□ 0.77
SCARB1-207ENST00000541661 PTCH1Q13635 1447 aa19.86■□□□□ 0.77
SCARB1-207ENST00000541661 VGFO15240 615 aaPredicted RBP19.86■□□□□ 0.77
SCARB1-207ENST00000541661 DDX17Q92841 729 aaKnown RBP19.86■□□□□ 0.77
SCARB1-207ENST00000541661 C1orf167Q5SNV9 1468 aa19.86■□□□□ 0.77
SCARB1-207ENST00000541661 PRAG1Q86YV5 1406 aa19.85■□□□□ 0.77
SCARB1-207ENST00000541661 RPGRIP1LQ68CZ1 1315 aa19.83■□□□□ 0.77
SCARB1-207ENST00000541661 ROBO2Q9HCK4 1378 aa19.83■□□□□ 0.76
SCARB1-207ENST00000541661 QTRT2Q9H974 415 aaKnown RBP19.82■□□□□ 0.76
SCARB1-207ENST00000541661 RBM6P78332 1123 aaKnown RBP19.81■□□□□ 0.76
SCARB1-207ENST00000541661 C8orf37Q96NL8 207 aa19.81■□□□□ 0.76
SCARB1-207ENST00000541661 PPLO60437 1756 aa19.8■□□□□ 0.76
SCARB1-207ENST00000541661 SOS2Q07890 1332 aaPredicted RBP19.8■□□□□ 0.76
SCARB1-207ENST00000541661 HFM1A2PYH4 1435 aa19.79■□□□□ 0.76
SCARB1-207ENST00000541661 ORAI2Q96SN7 254 aa19.79■□□□□ 0.76
SCARB1-207ENST00000541661 RGS12O14924 1447 aa19.77■□□□□ 0.76
SCARB1-207ENST00000541661 NGLY1Q96IV0 654 aa19.77■□□□□ 0.76
SCARB1-207ENST00000541661 SLC4A1APQ9BWU0 796 aaKnown RBP19.76■□□□□ 0.75
SCARB1-207ENST00000541661 COL22A1Q8NFW1 1626 aaPredicted RBP19.74■□□□□ 0.75
SCARB1-207ENST00000541661 ADAMTS2O95450 1211 aa19.74■□□□□ 0.75
SCARB1-207ENST00000541661 FNBP4Q8N3X1 1017 aaPredicted RBP19.72■□□□□ 0.75
SCARB1-207ENST00000541661 CDC42BPGQ6DT37 1551 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms