RNA–Protein interactions for RNA: ENST00000541132.1

RAD9A-206, Transcript of RAD9 checkpoint clamp component A, humanhuman

TSL 3

Gene RAD9A, Length 586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-206ENST00000541132 MYO5BQ9ULV0 1848 aa28.01■■■□□ 2.07
RAD9A-206ENST00000541132 MSH6P52701 1360 aa28■■■□□ 2.07
RAD9A-206ENST00000541132 POTEAQ6S8J7 498 aa28■■■□□ 2.07
RAD9A-206ENST00000541132 ADGRL2O95490 1459 aa28■■■□□ 2.07
RAD9A-206ENST00000541132 RPRD2Q5VT52 1461 aaKnown RBP27.97■■■□□ 2.07
RAD9A-206ENST00000541132 CHD2O14647 1828 aaKnown RBP27.97■■■□□ 2.07
RAD9A-206ENST00000541132 PHLPP1O60346 1717 aa27.96■■■□□ 2.07
RAD9A-206ENST00000541132 FAM50AQ14320 339 aaKnown RBP27.96■■■□□ 2.07
RAD9A-206ENST00000541132 SLAIN2Q9P270 581 aa27.96■■■□□ 2.07
RAD9A-206ENST00000541132 GCC2Q8IWJ2 1684 aa27.96■■■□□ 2.07
RAD9A-206ENST00000541132 ANKRD50Q9ULJ7 1429 aa27.95■■■□□ 2.07
RAD9A-206ENST00000541132 PPP1R15AO75807 674 aaPredicted RBP27.95■■■□□ 2.06
RAD9A-206ENST00000541132 HDGFP51858 240 aaKnown RBP27.95■■■□□ 2.06
RAD9A-206ENST00000541132 PLEKHG1Q9ULL1 1385 aa27.94■■■□□ 2.06
RAD9A-206ENST00000541132 ZFYVE9O95405 1425 aa27.93■■■□□ 2.06
RAD9A-206ENST00000541132 RIMS2Q9UQ26 1411 aa27.92■■■□□ 2.06
RAD9A-206ENST00000541132 TMEM131LA2VDJ0 1609 aa27.91■■■□□ 2.06
RAD9A-206ENST00000541132 JCADQ9P266 1359 aa27.88■■■□□ 2.05
RAD9A-206ENST00000541132 CHGAP10645 457 aaKnown RBP27.88■■■□□ 2.05
RAD9A-206ENST00000541132 TBX22Q9Y458 520 aa27.87■■■□□ 2.05
RAD9A-206ENST00000541132 C14orf37Q86TY3 774 aa27.85■■■□□ 2.05
RAD9A-206ENST00000541132 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.85■■■□□ 2.05
RAD9A-206ENST00000541132 UNC13BO14795 1591 aa27.82■■■□□ 2.04
RAD9A-206ENST00000541132 NUTM2DQ5VT03 806 aaPredicted RBP27.82■■■□□ 2.04
RAD9A-206ENST00000541132 NCOA3Q9Y6Q9 1424 aa27.82■■■□□ 2.04
RAD9A-206ENST00000541132 COL16A1Q07092 1604 aaPredicted RBP27.81■■■□□ 2.04
RAD9A-206ENST00000541132 SETD1AO15047 1707 aaKnown RBP27.81■■■□□ 2.04
RAD9A-206ENST00000541132 E9PCH4 1651 aa27.81■■■□□ 2.04
RAD9A-206ENST00000541132 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.78■■■□□ 2.04
RAD9A-206ENST00000541132 ADAMTS13Q76LX8 1427 aa27.77■■■□□ 2.04
RAD9A-206ENST00000541132 DIP2AQ14689 1571 aa27.77■■■□□ 2.04
RAD9A-206ENST00000541132 CADPS2Q86UW7 1296 aa27.76■■■□□ 2.03
RAD9A-206ENST00000541132 ATF3P18847 181 aa27.75■■■□□ 2.03
RAD9A-206ENST00000541132 C19orf44Q9H6X5 657 aa27.75■■■□□ 2.03
RAD9A-206ENST00000541132 PIK3R4Q99570 1358 aa27.74■■■□□ 2.03
RAD9A-206ENST00000541132 SPATA31A6Q5VVP1 1343 aa27.74■■■□□ 2.03
RAD9A-206ENST00000541132 MEX3CQ5U5Q3 659 aaKnown RBP27.74■■■□□ 2.03
RAD9A-206ENST00000541132 LRP6O75581 1613 aa27.72■■■□□ 2.03
RAD9A-206ENST00000541132 IQGAP3Q86VI3 1631 aa27.72■■■□□ 2.03
RAD9A-206ENST00000541132 AHDC1Q5TGY3 1603 aaPredicted RBP27.7■■■□□ 2.03
RAD9A-206ENST00000541132 TRPM2O94759 1503 aa27.7■■■□□ 2.02
RAD9A-206ENST00000541132 SHPRHQ149N8 1683 aa27.69■■■□□ 2.02
RAD9A-206ENST00000541132 AMOTL2Q9Y2J4 779 aa27.69■■■□□ 2.02
RAD9A-206ENST00000541132 ZNF772Q68DY9 489 aaPredicted RBP27.68■■■□□ 2.02
RAD9A-206ENST00000541132 ROCK1Q13464 1354 aa27.68■■■□□ 2.02
RAD9A-206ENST00000541132 NUP155O75694 1391 aa27.66■■■□□ 2.02
RAD9A-206ENST00000541132 PTPRUQ92729 1446 aa27.65■■■□□ 2.02
RAD9A-206ENST00000541132 BRINP3Q76B58 766 aa27.63■■■□□ 2.01
RAD9A-206ENST00000541132 TRIM52Q96A61 297 aa27.63■■■□□ 2.01
RAD9A-206ENST00000541132 NUTM2BA6NNL0 878 aaPredicted RBP27.6■■■□□ 2.01
RAD9A-206ENST00000541132 NUTM2EB1AL46 878 aaPredicted RBP27.6■■■□□ 2.01
RAD9A-206ENST00000541132 ITGAEP38570 1179 aa27.6■■■□□ 2.01
RAD9A-206ENST00000541132 NUTM2AQ8IVF1 878 aaPredicted RBP27.6■■■□□ 2.01
RAD9A-206ENST00000541132 NRXN3Q9Y4C0 1643 aa27.57■■■□□ 2
RAD9A-206ENST00000541132 UPF1Q92900 1129 aaKnown RBP eCLIP27.57■■■□□ 2
RAD9A-206ENST00000541132 DCCP43146 1447 aa27.57■■■□□ 2
RAD9A-206ENST00000541132 SPHKAPQ2M3C7 1700 aa27.56■■■□□ 2
RAD9A-206ENST00000541132 XRN1Q8IZH2 1706 aaKnown RBP27.56■■■□□ 2
RAD9A-206ENST00000541132 RXRBP28702 533 aa27.56■■■□□ 2
RAD9A-206ENST00000541132 ZNF326Q5BKZ1 582 aaKnown RBP27.56■■■□□ 2
RAD9A-206ENST00000541132 SETBP1Q9Y6X0 1596 aa27.55■■■□□ 2
RAD9A-206ENST00000541132 ASXL1Q8IXJ9 1541 aa27.54■■■□□ 2
RAD9A-206ENST00000541132 NHSL1Q5SYE7 1610 aa27.52■■■□□ 2
RAD9A-206ENST00000541132 MST1RQ04912 1400 aa27.51■■□□□ 1.99
RAD9A-206ENST00000541132 SETD5Q9C0A6 1442 aa27.5■■□□□ 1.99
RAD9A-206ENST00000541132 METP08581 1390 aa27.49■■□□□ 1.99
RAD9A-206ENST00000541132 AFF2P51816 1311 aa27.49■■□□□ 1.99
RAD9A-206ENST00000541132 LRRC59Q96AG4 307 aaKnown RBP27.48■■□□□ 1.99
RAD9A-206ENST00000541132 CDK12Q9NYV4 1490 aaPredicted RBP27.45■■□□□ 1.99
RAD9A-206ENST00000541132 ADGRL3Q9HAR2 1447 aa27.43■■□□□ 1.98
RAD9A-206ENST00000541132 DDX17Q92841 729 aaKnown RBP27.43■■□□□ 1.98
RAD9A-206ENST00000541132 NALCNQ8IZF0 1738 aa27.42■■□□□ 1.98
RAD9A-206ENST00000541132 PPARGC1BQ86YN6 1023 aaKnown RBP27.42■■□□□ 1.98
RAD9A-206ENST00000541132 C8orf37Q96NL8 207 aa27.42■■□□□ 1.98
RAD9A-206ENST00000541132 CLTCL1P53675 1640 aa27.41■■□□□ 1.98
RAD9A-206ENST00000541132 NEXMIFQ5QGS0 1516 aa27.41■■□□□ 1.98
RAD9A-206ENST00000541132 KIF1BO60333 1816 aa27.4■■□□□ 1.98
RAD9A-206ENST00000541132 PNPLA6Q8IY17 1366 aa27.38■■□□□ 1.97
RAD9A-206ENST00000541132 QTRT2Q9H974 415 aaKnown RBP27.38■■□□□ 1.97
RAD9A-206ENST00000541132 RBM6P78332 1123 aaKnown RBP27.36■■□□□ 1.97
RAD9A-206ENST00000541132 C1orf167Q5SNV9 1468 aa27.33■■□□□ 1.97
RAD9A-206ENST00000541132 RGS12O14924 1447 aa27.33■■□□□ 1.96
RAD9A-206ENST00000541132 ADAMTS2O95450 1211 aa27.32■■□□□ 1.96
RAD9A-206ENST00000541132 NGLY1Q96IV0 654 aa27.32■■□□□ 1.96
RAD9A-206ENST00000541132 VGFO15240 615 aaPredicted RBP27.29■■□□□ 1.96
RAD9A-206ENST00000541132 PTCH1Q13635 1447 aa27.28■■□□□ 1.96
RAD9A-206ENST00000541132 LAMC1P11047 1609 aa27.27■■□□□ 1.96
RAD9A-206ENST00000541132 ORAI2Q96SN7 254 aa27.27■■□□□ 1.96
RAD9A-206ENST00000541132 ROBO2Q9HCK4 1378 aa27.26■■□□□ 1.95
RAD9A-206ENST00000541132 SOS2Q07890 1332 aaPredicted RBP27.25■■□□□ 1.95
RAD9A-206ENST00000541132 NAIPQ13075 1403 aa27.24■■□□□ 1.95
RAD9A-206ENST00000541132 USP21Q9UK80 565 aa27.22■■□□□ 1.95
RAD9A-206ENST00000541132 RPGRIP1LQ68CZ1 1315 aa27.19■■□□□ 1.94
RAD9A-206ENST00000541132 PPLO60437 1756 aa27.18■■□□□ 1.94
RAD9A-206ENST00000541132 TRPC5Q9UL62 973 aaPredicted RBP27.18■■□□□ 1.94
RAD9A-206ENST00000541132 HFM1A2PYH4 1435 aa27.17■■□□□ 1.94
RAD9A-206ENST00000541132 PRAG1Q86YV5 1406 aa27.17■■□□□ 1.94
RAD9A-206ENST00000541132 RRBP1Q9P2E9 1410 aaKnown RBP27.17■■□□□ 1.94
RAD9A-206ENST00000541132 ATAD2Q6PL18 1390 aa27.17■■□□□ 1.94
RAD9A-206ENST00000541132 FNBP4Q8N3X1 1017 aaPredicted RBP27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms