RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 BCANQ96GW7 911 aa25.01■■□□□ 1.59
TRIM65-203ENST00000540812 PHF23Q9BUL5 403 aaPredicted RBP25.01■■□□□ 1.59
TRIM65-203ENST00000540812 GCC2Q8IWJ2 1684 aa25.01■■□□□ 1.59
TRIM65-203ENST00000540812 MYO5BQ9ULV0 1848 aa25■■□□□ 1.59
TRIM65-203ENST00000540812 RIMS2Q9UQ26 1411 aa25■■□□□ 1.59
TRIM65-203ENST00000540812 NWD1Q149M9 1564 aa24.99■■□□□ 1.59
TRIM65-203ENST00000540812 PPARGC1BQ86YN6 1023 aaKnown RBP24.99■■□□□ 1.59
TRIM65-203ENST00000540812 TMEM131LA2VDJ0 1609 aa24.98■■□□□ 1.59
TRIM65-203ENST00000540812 FAM135BQ49AJ0 1406 aa24.97■■□□□ 1.59
TRIM65-203ENST00000540812 PLEKHG1Q9ULL1 1385 aa24.97■■□□□ 1.59
TRIM65-203ENST00000540812 ITGAEP38570 1179 aa24.97■■□□□ 1.59
TRIM65-203ENST00000540812 E9PCH4 1651 aa24.97■■□□□ 1.59
TRIM65-203ENST00000540812 NKTRP30414 1462 aaKnown RBP24.96■■□□□ 1.59
TRIM65-203ENST00000540812 PPP1R15AO75807 674 aaPredicted RBP24.95■■□□□ 1.58
TRIM65-203ENST00000540812 CHGAP10645 457 aaKnown RBP24.95■■□□□ 1.58
TRIM65-203ENST00000540812 IQGAP3Q86VI3 1631 aa24.94■■□□□ 1.58
TRIM65-203ENST00000540812 NUP155O75694 1391 aa24.93■■□□□ 1.58
TRIM65-203ENST00000540812 NUTM2DQ5VT03 806 aaPredicted RBP24.92■■□□□ 1.58
TRIM65-203ENST00000540812 HDGFP51858 240 aaKnown RBP24.91■■□□□ 1.58
TRIM65-203ENST00000540812 ROBO1Q9Y6N7 1651 aa24.89■■□□□ 1.58
TRIM65-203ENST00000540812 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.88■■□□□ 1.57
TRIM65-203ENST00000540812 TBX22Q9Y458 520 aa24.88■■□□□ 1.57
TRIM65-203ENST00000540812 MSH6P52701 1360 aa24.88■■□□□ 1.57
TRIM65-203ENST00000540812 CHD2O14647 1828 aaKnown RBP24.88■■□□□ 1.57
TRIM65-203ENST00000540812 ADAMTS13Q76LX8 1427 aa24.87■■□□□ 1.57
TRIM65-203ENST00000540812 RGS17Q9UGC6 210 aaPredicted RBP24.87■■□□□ 1.57
TRIM65-203ENST00000540812 SLAIN2Q9P270 581 aa24.83■■□□□ 1.57
TRIM65-203ENST00000540812 DIP2AQ14689 1571 aa24.79■■□□□ 1.56
TRIM65-203ENST00000540812 PIK3R4Q99570 1358 aa24.77■■□□□ 1.56
TRIM65-203ENST00000540812 NCOA3Q9Y6Q9 1424 aa24.77■■□□□ 1.56
TRIM65-203ENST00000540812 PTPRUQ92729 1446 aa24.76■■□□□ 1.55
TRIM65-203ENST00000540812 C14orf37Q86TY3 774 aa24.75■■□□□ 1.55
TRIM65-203ENST00000540812 PHLPP1O60346 1717 aa24.73■■□□□ 1.55
TRIM65-203ENST00000540812 SPHKAPQ2M3C7 1700 aa24.73■■□□□ 1.55
TRIM65-203ENST00000540812 RRBP1Q9P2E9 1410 aaKnown RBP24.73■■□□□ 1.55
TRIM65-203ENST00000540812 AMOTL2Q9Y2J4 779 aa24.73■■□□□ 1.55
TRIM65-203ENST00000540812 TRPM2O94759 1503 aa24.72■■□□□ 1.55
TRIM65-203ENST00000540812 POTEAQ6S8J7 498 aa24.71■■□□□ 1.55
TRIM65-203ENST00000540812 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.7■■□□□ 1.54
TRIM65-203ENST00000540812 C19orf44Q9H6X5 657 aa24.7■■□□□ 1.54
TRIM65-203ENST00000540812 NRXN3Q9Y4C0 1643 aa24.7■■□□□ 1.54
TRIM65-203ENST00000540812 JCADQ9P266 1359 aa24.69■■□□□ 1.54
TRIM65-203ENST00000540812 ZNF326Q5BKZ1 582 aaKnown RBP24.69■■□□□ 1.54
TRIM65-203ENST00000540812 NAIPQ13075 1403 aa24.69■■□□□ 1.54
TRIM65-203ENST00000540812 CADPS2Q86UW7 1296 aa24.68■■□□□ 1.54
TRIM65-203ENST00000540812 COL16A1Q07092 1604 aaPredicted RBP24.68■■□□□ 1.54
TRIM65-203ENST00000540812 SETBP1Q9Y6X0 1596 aa24.67■■□□□ 1.54
TRIM65-203ENST00000540812 ATF3P18847 181 aa24.67■■□□□ 1.54
TRIM65-203ENST00000540812 CLTCL1P53675 1640 aa24.66■■□□□ 1.54
TRIM65-203ENST00000540812 METP08581 1390 aa24.64■■□□□ 1.53
TRIM65-203ENST00000540812 XRN1Q8IZH2 1706 aaKnown RBP24.64■■□□□ 1.53
TRIM65-203ENST00000540812 NEXMIFQ5QGS0 1516 aa24.61■■□□□ 1.53
TRIM65-203ENST00000540812 AHDC1Q5TGY3 1603 aaPredicted RBP24.61■■□□□ 1.53
TRIM65-203ENST00000540812 BRINP3Q76B58 766 aa24.6■■□□□ 1.53
TRIM65-203ENST00000540812 LRP6O75581 1613 aa24.59■■□□□ 1.53
TRIM65-203ENST00000540812 DCCP43146 1447 aa24.58■■□□□ 1.53
TRIM65-203ENST00000540812 TRIM52Q96A61 297 aa24.57■■□□□ 1.52
TRIM65-203ENST00000540812 HFM1A2PYH4 1435 aa24.55■■□□□ 1.52
TRIM65-203ENST00000540812 SPATA31A6Q5VVP1 1343 aa24.55■■□□□ 1.52
TRIM65-203ENST00000540812 MST1RQ04912 1400 aa24.54■■□□□ 1.52
TRIM65-203ENST00000540812 ASXL1Q8IXJ9 1541 aa24.53■■□□□ 1.52
TRIM65-203ENST00000540812 KIF1BO60333 1816 aa24.53■■□□□ 1.52
TRIM65-203ENST00000540812 SHPRHQ149N8 1683 aa24.51■■□□□ 1.51
TRIM65-203ENST00000540812 ADGRL3Q9HAR2 1447 aa24.51■■□□□ 1.51
TRIM65-203ENST00000540812 MEX3CQ5U5Q3 659 aaKnown RBP24.5■■□□□ 1.51
TRIM65-203ENST00000540812 SLC4A1APQ9BWU0 796 aaKnown RBP24.5■■□□□ 1.51
TRIM65-203ENST00000540812 SETD1AO15047 1707 aaKnown RBP24.47■■□□□ 1.51
TRIM65-203ENST00000540812 NALCNQ8IZF0 1738 aa24.47■■□□□ 1.51
TRIM65-203ENST00000540812 VGFO15240 615 aaPredicted RBP24.46■■□□□ 1.51
TRIM65-203ENST00000540812 NUTM2BA6NNL0 878 aaPredicted RBP24.45■■□□□ 1.5
TRIM65-203ENST00000540812 NUTM2EB1AL46 878 aaPredicted RBP24.45■■□□□ 1.5
TRIM65-203ENST00000540812 NUTM2AQ8IVF1 878 aaPredicted RBP24.45■■□□□ 1.5
TRIM65-203ENST00000540812 DDX17Q92841 729 aaKnown RBP24.45■■□□□ 1.5
TRIM65-203ENST00000540812 NHSL1Q5SYE7 1610 aa24.45■■□□□ 1.5
TRIM65-203ENST00000540812 SETD5Q9C0A6 1442 aa24.44■■□□□ 1.5
TRIM65-203ENST00000540812 ROBO2Q9HCK4 1378 aa24.44■■□□□ 1.5
TRIM65-203ENST00000540812 FOXD1Q16676 465 aa24.44■■□□□ 1.5
TRIM65-203ENST00000540812 RPGRIP1LQ68CZ1 1315 aa24.43■■□□□ 1.5
TRIM65-203ENST00000540812 PTCH1Q13635 1447 aa24.43■■□□□ 1.5
TRIM65-203ENST00000540812 ZNF772Q68DY9 489 aaPredicted RBP24.42■■□□□ 1.5
TRIM65-203ENST00000540812 C1orf167Q5SNV9 1468 aa24.39■■□□□ 1.5
TRIM65-203ENST00000540812 PPLO60437 1756 aa24.39■■□□□ 1.49
TRIM65-203ENST00000540812 LRRC59Q96AG4 307 aaKnown RBP24.38■■□□□ 1.49
TRIM65-203ENST00000540812 PRAG1Q86YV5 1406 aa24.37■■□□□ 1.49
TRIM65-203ENST00000540812 PNPLA6Q8IY17 1366 aa24.36■■□□□ 1.49
TRIM65-203ENST00000540812 AFF2P51816 1311 aa24.35■■□□□ 1.49
TRIM65-203ENST00000540812 ORAI2Q96SN7 254 aa24.34■■□□□ 1.49
TRIM65-203ENST00000540812 ADGRF5Q8IZF2 1346 aa24.34■■□□□ 1.49
TRIM65-203ENST00000540812 CCDC144AA2RUR9 1427 aa24.32■■□□□ 1.48
TRIM65-203ENST00000540812 RXRBP28702 533 aa24.31■■□□□ 1.48
TRIM65-203ENST00000540812 RGL3Q3MIN7 710 aa24.31■■□□□ 1.48
TRIM65-203ENST00000540812 SPATA31E1Q6ZUB1 1445 aa24.31■■□□□ 1.48
TRIM65-203ENST00000540812 MPHOSPH9Q99550 1183 aa24.31■■□□□ 1.48
TRIM65-203ENST00000540812 C8orf37Q96NL8 207 aa24.3■■□□□ 1.48
TRIM65-203ENST00000540812 LAMC1P11047 1609 aa24.29■■□□□ 1.48
TRIM65-203ENST00000540812 SOS2Q07890 1332 aaPredicted RBP24.29■■□□□ 1.48
TRIM65-203ENST00000540812 UPF1Q92900 1129 aaKnown RBP eCLIP24.26■■□□□ 1.47
TRIM65-203ENST00000540812 ADAMTS2O95450 1211 aa24.25■■□□□ 1.47
TRIM65-203ENST00000540812 STK26Q9P289 416 aa24.25■■□□□ 1.47
TRIM65-203ENST00000540812 CDK12Q9NYV4 1490 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms