RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 SLIT1O75093 1534 aa24.85■■□□□ 1.57
UBC-208ENST00000540700 RBM33Q96EV2 1170 aaKnown RBP24.84■■□□□ 1.57
UBC-208ENST00000540700 ARHGAP31Q2M1Z3 1444 aa24.84■■□□□ 1.57
UBC-208ENST00000540700 FAM135BQ49AJ0 1406 aa24.83■■□□□ 1.57
UBC-208ENST00000540700 TMEM94Q12767 1356 aa24.82■■□□□ 1.56
UBC-208ENST00000540700 E9PCH4 1651 aa24.81■■□□□ 1.56
UBC-208ENST00000540700 TMEM2Q9UHN6 1383 aa24.81■■□□□ 1.56
UBC-208ENST00000540700 XIRP1Q702N8 1843 aaKnown RBP24.79■■□□□ 1.56
UBC-208ENST00000540700 SLC26A8Q96RN1 970 aa24.79■■□□□ 1.56
UBC-208ENST00000540700 PROSER2Q86WR7 435 aaPredicted RBP24.78■■□□□ 1.56
UBC-208ENST00000540700 MPHOSPH9Q99550 1183 aa24.78■■□□□ 1.56
UBC-208ENST00000540700 KCNA6P17658 529 aa24.77■■□□□ 1.56
UBC-208ENST00000540700 SLC4A1APQ9BWU0 796 aaKnown RBP24.77■■□□□ 1.56
UBC-208ENST00000540700 PIK3C2BO00750 1634 aa24.75■■□□□ 1.55
UBC-208ENST00000540700 FOXD1Q16676 465 aa24.75■■□□□ 1.55
UBC-208ENST00000540700 IDI1Q13907 227 aa24.74■■□□□ 1.55
UBC-208ENST00000540700 NOS1P29475 1434 aa24.74■■□□□ 1.55
UBC-208ENST00000540700 RPRD2Q5VT52 1461 aaKnown RBP24.74■■□□□ 1.55
UBC-208ENST00000540700 BCANQ96GW7 911 aa24.73■■□□□ 1.55
UBC-208ENST00000540700 ACIN1Q9UKV3 1341 aaKnown RBP24.7■■□□□ 1.54
UBC-208ENST00000540700 ROBO1Q9Y6N7 1651 aa24.7■■□□□ 1.54
UBC-208ENST00000540700 DHX57Q6P158 1386 aaKnown RBP24.66■■□□□ 1.54
UBC-208ENST00000540700 SPHKAPQ2M3C7 1700 aa24.65■■□□□ 1.54
UBC-208ENST00000540700 SLAIN2Q9P270 581 aa24.65■■□□□ 1.54
UBC-208ENST00000540700 MSH6P52701 1360 aa24.65■■□□□ 1.54
UBC-208ENST00000540700 TRPM2O94759 1503 aa24.63■■□□□ 1.53
UBC-208ENST00000540700 NKTRP30414 1462 aaKnown RBP24.6■■□□□ 1.53
UBC-208ENST00000540700 JCADQ9P266 1359 aa24.6■■□□□ 1.53
UBC-208ENST00000540700 CLTCL1P53675 1640 aa24.59■■□□□ 1.53
UBC-208ENST00000540700 SETD1AO15047 1707 aaKnown RBP24.58■■□□□ 1.53
UBC-208ENST00000540700 ANKRD30BQ9BXX2 1392 aa24.58■■□□□ 1.53
UBC-208ENST00000540700 KDM5AP29375 1690 aaKnown RBP24.56■■□□□ 1.52
UBC-208ENST00000540700 ADGRB3O60242 1522 aa24.56■■□□□ 1.52
UBC-208ENST00000540700 PPP1R15AO75807 674 aaPredicted RBP24.56■■□□□ 1.52
UBC-208ENST00000540700 SLC52A1Q9NWF4 448 aa24.56■■□□□ 1.52
UBC-208ENST00000540700 PHLPP1O60346 1717 aa24.55■■□□□ 1.52
UBC-208ENST00000540700 NWD1Q149M9 1564 aa24.55■■□□□ 1.52
UBC-208ENST00000540700 MEX3CQ5U5Q3 659 aaKnown RBP24.54■■□□□ 1.52
UBC-208ENST00000540700 C14orf37Q86TY3 774 aa24.54■■□□□ 1.52
UBC-208ENST00000540700 PLEKHG1Q9ULL1 1385 aa24.5■■□□□ 1.51
UBC-208ENST00000540700 TMEM131LA2VDJ0 1609 aa24.5■■□□□ 1.51
UBC-208ENST00000540700 RIMS2Q9UQ26 1411 aa24.49■■□□□ 1.51
UBC-208ENST00000540700 CHGAP10645 457 aaKnown RBP24.48■■□□□ 1.51
UBC-208ENST00000540700 LRP6O75581 1613 aa24.47■■□□□ 1.51
UBC-208ENST00000540700 CCDC144AA2RUR9 1427 aa24.47■■□□□ 1.51
UBC-208ENST00000540700 ZFYVE9O95405 1425 aa24.47■■□□□ 1.51
UBC-208ENST00000540700 HDGFP51858 240 aaKnown RBP24.47■■□□□ 1.51
UBC-208ENST00000540700 NUTM2DQ5VT03 806 aaPredicted RBP24.47■■□□□ 1.51
UBC-208ENST00000540700 UPF1Q92900 1129 aaKnown RBP eCLIP24.47■■□□□ 1.51
UBC-208ENST00000540700 SPATA31A6Q5VVP1 1343 aa24.46■■□□□ 1.51
UBC-208ENST00000540700 ZNF772Q68DY9 489 aaPredicted RBP24.46■■□□□ 1.51
UBC-208ENST00000540700 COL16A1Q07092 1604 aaPredicted RBP24.46■■□□□ 1.51
UBC-208ENST00000540700 TBX22Q9Y458 520 aa24.44■■□□□ 1.5
UBC-208ENST00000540700 MYO5BQ9ULV0 1848 aa24.44■■□□□ 1.5
UBC-208ENST00000540700 ATF3P18847 181 aa24.43■■□□□ 1.5
UBC-208ENST00000540700 SPATA31E1Q6ZUB1 1445 aa24.43■■□□□ 1.5
UBC-208ENST00000540700 SIN3AQ96ST3 1273 aa24.42■■□□□ 1.5
UBC-208ENST00000540700 CADPS2Q86UW7 1296 aa24.41■■□□□ 1.5
UBC-208ENST00000540700 CHD2O14647 1828 aaKnown RBP24.4■■□□□ 1.5
UBC-208ENST00000540700 NUTM2BA6NNL0 878 aaPredicted RBP24.4■■□□□ 1.5
UBC-208ENST00000540700 NUTM2EB1AL46 878 aaPredicted RBP24.4■■□□□ 1.5
UBC-208ENST00000540700 NUTM2AQ8IVF1 878 aaPredicted RBP24.4■■□□□ 1.5
UBC-208ENST00000540700 NCOA3Q9Y6Q9 1424 aa24.39■■□□□ 1.5
UBC-208ENST00000540700 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.39■■□□□ 1.49
UBC-208ENST00000540700 C19orf44Q9H6X5 657 aa24.39■■□□□ 1.49
UBC-208ENST00000540700 RXRBP28702 533 aa24.38■■□□□ 1.49
UBC-208ENST00000540700 KIF1BO60333 1816 aa24.38■■□□□ 1.49
UBC-208ENST00000540700 ADAMTS13Q76LX8 1427 aa24.35■■□□□ 1.49
UBC-208ENST00000540700 BRINP3Q76B58 766 aa24.34■■□□□ 1.49
UBC-208ENST00000540700 NEXMIFQ5QGS0 1516 aa24.34■■□□□ 1.49
UBC-208ENST00000540700 AHDC1Q5TGY3 1603 aaPredicted RBP24.33■■□□□ 1.49
UBC-208ENST00000540700 RGL3Q3MIN7 710 aa24.32■■□□□ 1.48
UBC-208ENST00000540700 AMOTL2Q9Y2J4 779 aa24.32■■□□□ 1.48
UBC-208ENST00000540700 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.32■■□□□ 1.48
UBC-208ENST00000540700 NEUROD1Q13562 356 aa24.3■■□□□ 1.48
UBC-208ENST00000540700 CCER1Q8TC90 406 aaPredicted RBP24.3■■□□□ 1.48
UBC-208ENST00000540700 AFF2P51816 1311 aa24.3■■□□□ 1.48
UBC-208ENST00000540700 ZNF326Q5BKZ1 582 aaKnown RBP24.29■■□□□ 1.48
UBC-208ENST00000540700 SHPRHQ149N8 1683 aa24.29■■□□□ 1.48
UBC-208ENST00000540700 PIK3R4Q99570 1358 aa24.29■■□□□ 1.48
UBC-208ENST00000540700 IFT172Q9UG01 1749 aa24.27■■□□□ 1.48
UBC-208ENST00000540700 SRCAPQ6ZRS2 3230 aa24.27■■□□□ 1.48
UBC-208ENST00000540700 PTPRUQ92729 1446 aa24.27■■□□□ 1.48
UBC-208ENST00000540700 PPLO60437 1756 aa24.26■■□□□ 1.47
UBC-208ENST00000540700 DIP2AQ14689 1571 aa24.25■■□□□ 1.47
UBC-208ENST00000540700 CLSPNQ9HAW4 1339 aa24.24■■□□□ 1.47
UBC-208ENST00000540700 C8orf37Q96NL8 207 aa24.23■■□□□ 1.47
UBC-208ENST00000540700 RPGRIP1LQ68CZ1 1315 aa24.22■■□□□ 1.47
UBC-208ENST00000540700 DDX17Q92841 729 aaKnown RBP24.22■■□□□ 1.47
UBC-208ENST00000540700 ASXL1Q8IXJ9 1541 aa24.21■■□□□ 1.47
UBC-208ENST00000540700 CDK12Q9NYV4 1490 aaPredicted RBP24.21■■□□□ 1.47
UBC-208ENST00000540700 ADGRF5Q8IZF2 1346 aa24.2■■□□□ 1.46
UBC-208ENST00000540700 QTRT2Q9H974 415 aaKnown RBP24.2■■□□□ 1.46
UBC-208ENST00000540700 L3MBTL2Q969R5 705 aa24.19■■□□□ 1.46
UBC-208ENST00000540700 LRRC59Q96AG4 307 aaKnown RBP24.19■■□□□ 1.46
UBC-208ENST00000540700 NRXN3Q9Y4C0 1643 aa24.19■■□□□ 1.46
UBC-208ENST00000540700 MYOM2P54296 1465 aa24.18■■□□□ 1.46
UBC-208ENST00000540700 DCCP43146 1447 aa24.18■■□□□ 1.46
UBC-208ENST00000540700 MST1RQ04912 1400 aa24.18■■□□□ 1.46
UBC-208ENST00000540700 NRXN1Q9ULB1 1477 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms