RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 SCAPERQ9BY12 1400 aa16.7■□□□□ 0.26
SFSWAP-208ENST00000539506 ABCA9Q8IUA7 1624 aa16.7■□□□□ 0.26
SFSWAP-208ENST00000539506 RRP1P56182 461 aaKnown RBP16.7■□□□□ 0.26
SFSWAP-208ENST00000539506 ATP7AQ04656 1500 aa16.7■□□□□ 0.26
SFSWAP-208ENST00000539506 KIF3BO15066 747 aa16.7■□□□□ 0.26
SFSWAP-208ENST00000539506 INO80Q9ULG1 1556 aaPredicted RBP16.69■□□□□ 0.26
SFSWAP-208ENST00000539506 CEP152O94986 1710 aa16.69■□□□□ 0.26
SFSWAP-208ENST00000539506 VWDEQ8N2E2 1590 aa16.69■□□□□ 0.26
SFSWAP-208ENST00000539506 RCAN3Q9UKA8 241 aa16.68■□□□□ 0.26
SFSWAP-208ENST00000539506 UGGT1Q9NYU2 1555 aa16.68■□□□□ 0.26
SFSWAP-208ENST00000539506 BLMP54132 1417 aaPredicted RBP16.68■□□□□ 0.26
SFSWAP-208ENST00000539506 MYT1LQ9UL68 1186 aa16.67■□□□□ 0.26
SFSWAP-208ENST00000539506 TET3O43151 1660 aa16.67■□□□□ 0.26
SFSWAP-208ENST00000539506 MROH1Q8NDA8 1641 aa16.67■□□□□ 0.26
SFSWAP-208ENST00000539506 AMER1Q5JTC6 1135 aaPredicted RBP16.66■□□□□ 0.26
SFSWAP-208ENST00000539506 ADGRL1O94910 1474 aa16.66■□□□□ 0.26
SFSWAP-208ENST00000539506 SCAF11Q99590 1463 aaKnown RBP16.66■□□□□ 0.26
SFSWAP-208ENST00000539506 ADAMTS8Q9UP79 889 aa16.65■□□□□ 0.26
SFSWAP-208ENST00000539506 PDE4AP27815 886 aa16.65■□□□□ 0.26
SFSWAP-208ENST00000539506 PDE3BQ13370 1112 aa16.64■□□□□ 0.25
SFSWAP-208ENST00000539506 ASXL2Q76L83 1435 aa16.64■□□□□ 0.25
SFSWAP-208ENST00000539506 PPP2R1AP30153 589 aa16.63■□□□□ 0.25
SFSWAP-208ENST00000539506 CFAP70Q5T0N1 1121 aa16.63■□□□□ 0.25
SFSWAP-208ENST00000539506 ADGRF5Q8IZF2 1346 aa16.63■□□□□ 0.25
SFSWAP-208ENST00000539506 KNSTRNQ9Y448 316 aa16.62■□□□□ 0.25
SFSWAP-208ENST00000539506 KANK1Q14678 1352 aa16.61■□□□□ 0.25
SFSWAP-208ENST00000539506 INSRP06213 1382 aa16.61■□□□□ 0.25
SFSWAP-208ENST00000539506 MYOM1P52179 1685 aa16.6■□□□□ 0.25
SFSWAP-208ENST00000539506 ZMYM4Q5VZL5 1548 aa16.6■□□□□ 0.25
SFSWAP-208ENST00000539506 KIDINS220Q9ULH0 1771 aa16.59■□□□□ 0.25
SFSWAP-208ENST00000539506 SYNMO15061 1565 aa16.59■□□□□ 0.25
SFSWAP-208ENST00000539506 STAC3Q96MF2 364 aa16.59■□□□□ 0.25
SFSWAP-208ENST00000539506 PLEKHH1Q9ULM0 1364 aa16.58■□□□□ 0.25
SFSWAP-208ENST00000539506 ABCA6Q8N139 1617 aa16.57■□□□□ 0.24
SFSWAP-208ENST00000539506 PPRC1Q5VV67 1664 aaKnown RBP16.56■□□□□ 0.24
SFSWAP-208ENST00000539506 MAP3K4Q9Y6R4 1608 aa16.56■□□□□ 0.24
SFSWAP-208ENST00000539506 EFCAB6Q5THR3 1501 aa16.56■□□□□ 0.24
SFSWAP-208ENST00000539506 BRPF3Q9ULD4 1205 aa16.56■□□□□ 0.24
SFSWAP-208ENST00000539506 MROH2AA6NES4 1674 aa16.56■□□□□ 0.24
SFSWAP-208ENST00000539506 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
SFSWAP-208ENST00000539506 ERVK-7P63135 1459 aa16.55■□□□□ 0.24
SFSWAP-208ENST00000539506 C20orf194Q5TEA3 1177 aa16.55■□□□□ 0.24
SFSWAP-208ENST00000539506 CARD14Q9BXL6 1004 aa16.55■□□□□ 0.24
SFSWAP-208ENST00000539506 NEURL4Q96JN8 1562 aa16.55■□□□□ 0.24
SFSWAP-208ENST00000539506 KIAA1210Q9ULL0 1709 aa16.55■□□□□ 0.24
SFSWAP-208ENST00000539506 CDCA8Q53HL2 280 aa16.54■□□□□ 0.24
SFSWAP-208ENST00000539506 CRBNQ96SW2 442 aa16.54■□□□□ 0.24
SFSWAP-208ENST00000539506 MYOM2P54296 1465 aa16.54■□□□□ 0.24
SFSWAP-208ENST00000539506 ZNF521Q96K83 1311 aa16.53■□□□□ 0.24
SFSWAP-208ENST00000539506 BACH2Q9BYV9 841 aa16.53■□□□□ 0.24
SFSWAP-208ENST00000539506 EIF3AQ14152 1382 aaKnown RBP16.52■□□□□ 0.24
SFSWAP-208ENST00000539506 IFT172Q9UG01 1749 aa16.52■□□□□ 0.23
SFSWAP-208ENST00000539506 DUSP27Q5VZP5 1158 aa16.52■□□□□ 0.23
SFSWAP-208ENST00000539506 NRXN1Q9ULB1 1477 aa16.51■□□□□ 0.23
SFSWAP-208ENST00000539506 WDR43Q15061 677 aaKnown RBP eCLIP16.51■□□□□ 0.23
SFSWAP-208ENST00000539506 PIK3C2GO75747 1445 aa16.5■□□□□ 0.23
SFSWAP-208ENST00000539506 CCDC146Q8IYE0 955 aa16.5■□□□□ 0.23
SFSWAP-208ENST00000539506 PHF23Q9BUL5 403 aaPredicted RBP16.5■□□□□ 0.23
SFSWAP-208ENST00000539506 ZNF518AQ6AHZ1 1483 aa16.5■□□□□ 0.23
SFSWAP-208ENST00000539506 KDM5AP29375 1690 aaKnown RBP16.5■□□□□ 0.23
SFSWAP-208ENST00000539506 NOS1P29475 1434 aa16.5■□□□□ 0.23
SFSWAP-208ENST00000539506 DAXXQ9UER7 740 aaPredicted RBP16.5■□□□□ 0.23
SFSWAP-208ENST00000539506 NPC1L1Q9UHC9 1359 aa16.5■□□□□ 0.23
SFSWAP-208ENST00000539506 KIF1BO60333 1816 aa16.5■□□□□ 0.23
SFSWAP-208ENST00000539506 FRMPD1Q5SYB0 1578 aa16.5■□□□□ 0.23
SFSWAP-208ENST00000539506 TCERG1O14776 1098 aaKnown RBP16.5■□□□□ 0.23
SFSWAP-208ENST00000539506 LMTK2Q8IWU2 1503 aa16.49■□□□□ 0.23
SFSWAP-208ENST00000539506 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
SFSWAP-208ENST00000539506 NPATQ14207 1427 aa16.49■□□□□ 0.23
SFSWAP-208ENST00000539506 CHGAP10645 457 aaKnown RBP16.48■□□□□ 0.23
SFSWAP-208ENST00000539506 RGS3P49796 1198 aa16.48■□□□□ 0.23
SFSWAP-208ENST00000539506 GGT6Q6P531 493 aa16.48■□□□□ 0.23
SFSWAP-208ENST00000539506 ADGRB3O60242 1522 aa16.47■□□□□ 0.23
SFSWAP-208ENST00000539506 CFAP65Q6ZU64 1925 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-208ENST00000539506 CD109Q6YHK3 1445 aa16.46■□□□□ 0.23
SFSWAP-208ENST00000539506 POGZQ7Z3K3 1410 aa16.46■□□□□ 0.22
SFSWAP-208ENST00000539506 EIF5BO60841 1220 aaKnown RBP16.45■□□□□ 0.22
SFSWAP-208ENST00000539506 TRAK1Q9UPV9 953 aa16.45■□□□□ 0.22
SFSWAP-208ENST00000539506 TMEM132EQ6IEE7 984 aa16.45■□□□□ 0.22
SFSWAP-208ENST00000539506 DMRT2Q9Y5R5 561 aa16.44■□□□□ 0.22
SFSWAP-208ENST00000539506 APAF1O14727 1248 aa16.44■□□□□ 0.22
SFSWAP-208ENST00000539506 GOLGA2Q08379 1002 aa16.44■□□□□ 0.22
SFSWAP-208ENST00000539506 SLFN5Q08AF3 891 aa16.43■□□□□ 0.22
SFSWAP-208ENST00000539506 MYO3AQ8NEV4 1616 aa16.43■□□□□ 0.22
SFSWAP-208ENST00000539506 TRMT2AQ8IZ69 625 aaKnown RBP16.43■□□□□ 0.22
SFSWAP-208ENST00000539506 RAPGEF3O95398 923 aa16.42■□□□□ 0.22
SFSWAP-208ENST00000539506 C14orf93Q9H972 538 aaKnown RBP16.42■□□□□ 0.22
SFSWAP-208ENST00000539506 MLH3Q9UHC1 1453 aa16.42■□□□□ 0.22
SFSWAP-208ENST00000539506 CENPJQ9HC77 1338 aaPredicted RBP16.42■□□□□ 0.22
SFSWAP-208ENST00000539506 ARXQ96QS3 562 aa16.42■□□□□ 0.22
SFSWAP-208ENST00000539506 ADGRB1O14514 1584 aa16.42■□□□□ 0.22
SFSWAP-208ENST00000539506 NPM1P06748 294 aaKnown RBP eCLIP16.41■□□□□ 0.22
SFSWAP-208ENST00000539506 NFKBIBQ15653 356 aa16.41■□□□□ 0.22
SFSWAP-208ENST00000539506 NUTM2DQ5VT03 806 aaPredicted RBP16.41■□□□□ 0.22
SFSWAP-208ENST00000539506 SLC12A5Q9H2X9 1139 aa16.41■□□□□ 0.22
SFSWAP-208ENST00000539506 SBNO2Q9Y2G9 1366 aa16.41■□□□□ 0.22
SFSWAP-208ENST00000539506 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
SFSWAP-208ENST00000539506 FRAT1Q92837 279 aaPredicted RBP16.4■□□□□ 0.22
SFSWAP-208ENST00000539506 PPLO60437 1756 aa16.4■□□□□ 0.22
SFSWAP-208ENST00000539506 SETBP1Q9Y6X0 1596 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms