RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 RPRD2Q5VT52 1461 aaKnown RBP13.81□□□□□ -0.2
DDX11-213ENST00000539049 KDM2BQ8NHM5 1336 aa13.8□□□□□ -0.2
DDX11-213ENST00000539049 DDX11L8A8MPP1 907 aa13.8□□□□□ -0.2
DDX11-213ENST00000539049 VGFO15240 615 aaPredicted RBP13.8□□□□□ -0.2
DDX11-213ENST00000539049 XPCQ01831 940 aaPredicted RBP13.8□□□□□ -0.2
DDX11-213ENST00000539049 CDCA7LQ96GN5 454 aa13.79□□□□□ -0.2
DDX11-213ENST00000539049 TEX14Q8IWB6 1497 aa13.79□□□□□ -0.2
DDX11-213ENST00000539049 PNISRQ8TF01 805 aaKnown RBP13.78□□□□□ -0.2
DDX11-213ENST00000539049 CHGAP10645 457 aaKnown RBP13.78□□□□□ -0.2
DDX11-213ENST00000539049 HNRNPMP52272 730 aaKnown RBP eCLIP13.78□□□□□ -0.2
DDX11-213ENST00000539049 SPATA31E1Q6ZUB1 1445 aa13.78□□□□□ -0.2
DDX11-213ENST00000539049 SASS6Q6UVJ0 657 aa13.78□□□□□ -0.2
DDX11-213ENST00000539049 GAS2L3Q86XJ1 694 aa13.78□□□□□ -0.2
DDX11-213ENST00000539049 TSPY4P0CV99 314 aa13.77□□□□□ -0.2
DDX11-213ENST00000539049 TSPY10P0CW01 314 aa13.77□□□□□ -0.2
DDX11-213ENST00000539049 NASPP49321 788 aaPredicted RBP13.77□□□□□ -0.2
DDX11-213ENST00000539049 CSPP1Q1MSJ5 1256 aa13.77□□□□□ -0.2
DDX11-213ENST00000539049 USP19O94966 1318 aa13.77□□□□□ -0.2
DDX11-213ENST00000539049 DAPK1P53355 1430 aa13.77□□□□□ -0.2
DDX11-213ENST00000539049 PPP1R9BQ96SB3 815 aa13.77□□□□□ -0.21
DDX11-213ENST00000539049 AEBP1Q8IUX7 1158 aa13.77□□□□□ -0.21
DDX11-213ENST00000539049 CERS3Q8IU89 383 aa13.76□□□□□ -0.21
DDX11-213ENST00000539049 CHMP5Q9NZZ3 219 aa13.76□□□□□ -0.21
DDX11-213ENST00000539049 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
DDX11-213ENST00000539049 ZNF771Q7L3S4 317 aaPredicted RBP13.76□□□□□ -0.21
DDX11-213ENST00000539049 IFT140Q96RY7 1462 aa13.75□□□□□ -0.21
DDX11-213ENST00000539049 UPF2Q9HAU5 1272 aaKnown RBP13.75□□□□□ -0.21
DDX11-213ENST00000539049 ROCK1Q13464 1354 aa13.75□□□□□ -0.21
DDX11-213ENST00000539049 IRX5P78411 483 aaPredicted RBP13.75□□□□□ -0.21
DDX11-213ENST00000539049 TBC1D2Q9BYX2 928 aa13.75□□□□□ -0.21
DDX11-213ENST00000539049 ABCC5O15440 1437 aa13.75□□□□□ -0.21
DDX11-213ENST00000539049 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
DDX11-213ENST00000539049 DNAJC2Q99543 621 aaKnown RBP13.74□□□□□ -0.21
DDX11-213ENST00000539049 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
DDX11-213ENST00000539049 IQGAP2Q13576 1575 aa13.74□□□□□ -0.21
DDX11-213ENST00000539049 ZNF500O60304 480 aaPredicted RBP13.74□□□□□ -0.21
DDX11-213ENST00000539049 KCNJ4P48050 445 aa13.74□□□□□ -0.21
DDX11-213ENST00000539049 PDE3BQ13370 1112 aa13.74□□□□□ -0.21
DDX11-213ENST00000539049 WDR62O43379 1518 aa13.73□□□□□ -0.21
DDX11-213ENST00000539049 IGSF3O75054 1194 aa13.73□□□□□ -0.21
DDX11-213ENST00000539049 DHX29Q7Z478 1369 aaKnown RBP13.72□□□□□ -0.21
DDX11-213ENST00000539049 CCDC146Q8IYE0 955 aa13.72□□□□□ -0.21
DDX11-213ENST00000539049 BCCIPQ9P287 314 aaKnown RBP eCLIP13.72□□□□□ -0.21
DDX11-213ENST00000539049 SEC24BO95487 1268 aa13.71□□□□□ -0.21
DDX11-213ENST00000539049 USP47Q96K76 1375 aa13.71□□□□□ -0.21
DDX11-213ENST00000539049 NOL7Q9UMY1 257 aaKnown RBP13.71□□□□□ -0.22
DDX11-213ENST00000539049 NUP155O75694 1391 aa13.71□□□□□ -0.22
DDX11-213ENST00000539049 C20orf194Q5TEA3 1177 aa13.7□□□□□ -0.22
DDX11-213ENST00000539049 ATP2B3Q16720 1220 aa13.7□□□□□ -0.22
DDX11-213ENST00000539049 HS1BP3Q53T59 392 aa13.7□□□□□ -0.22
DDX11-213ENST00000539049 ZNF608Q9ULD9 1512 aaPredicted RBP13.7□□□□□ -0.22
DDX11-213ENST00000539049 PLEKHD1A6NEE1 506 aa13.69□□□□□ -0.22
DDX11-213ENST00000539049 DNMT1P26358 1616 aaKnown RBP13.69□□□□□ -0.22
DDX11-213ENST00000539049 SLC20A2Q08357 652 aa13.68□□□□□ -0.22
DDX11-213ENST00000539049 NBPF1Q3BBV0 1214 aa13.68□□□□□ -0.22
DDX11-213ENST00000539049 PANK3Q9H999 370 aa13.68□□□□□ -0.22
DDX11-213ENST00000539049 TARBP1Q13395 1621 aaKnown RBP13.68□□□□□ -0.22
DDX11-213ENST00000539049 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
DDX11-213ENST00000539049 APPP05067 770 aa13.68□□□□□ -0.22
DDX11-213ENST00000539049 CNPY4Q8N129 248 aa13.68□□□□□ -0.22
DDX11-213ENST00000539049 SKOR2Q2VWA4 1001 aaPredicted RBP13.67□□□□□ -0.22
DDX11-213ENST00000539049 HDAC5Q9UQL6 1122 aa13.67□□□□□ -0.22
DDX11-213ENST00000539049 PZPP20742 1482 aa13.67□□□□□ -0.22
DDX11-213ENST00000539049 POLR1AO95602 1720 aaPredicted RBP13.67□□□□□ -0.22
DDX11-213ENST00000539049 ZKSCAN5Q9Y2L8 839 aa13.65□□□□□ -0.22
DDX11-213ENST00000539049 WDR43Q15061 677 aaKnown RBP eCLIP13.65□□□□□ -0.22
DDX11-213ENST00000539049 TSC1Q92574 1164 aa13.65□□□□□ -0.22
DDX11-213ENST00000539049 MYRIPQ8NFW9 859 aa13.65□□□□□ -0.23
DDX11-213ENST00000539049 BCORL1Q5H9F3 1711 aa13.64□□□□□ -0.23
DDX11-213ENST00000539049 PBRM1Q86U86 1689 aa13.64□□□□□ -0.23
DDX11-213ENST00000539049 CCDC66A2RUB6 948 aa13.64□□□□□ -0.23
DDX11-213ENST00000539049 GBP4Q96PP9 640 aa13.64□□□□□ -0.23
DDX11-213ENST00000539049 ADAMTS12P58397 1594 aa13.64□□□□□ -0.23
DDX11-213ENST00000539049 WWC1Q8IX03 1113 aa13.64□□□□□ -0.23
DDX11-213ENST00000539049 KIAA1107Q9UPP5 1409 aa13.64□□□□□ -0.23
DDX11-213ENST00000539049 LRPPRCP42704 1394 aaKnown RBP13.64□□□□□ -0.23
DDX11-213ENST00000539049 CLGNO14967 610 aa13.63□□□□□ -0.23
DDX11-213ENST00000539049 ZNF710Q8N1W2 664 aa13.63□□□□□ -0.23
DDX11-213ENST00000539049 NUP153P49790 1475 aaKnown RBP13.63□□□□□ -0.23
DDX11-213ENST00000539049 MBD5Q9P267 1494 aa13.63□□□□□ -0.23
DDX11-213ENST00000539049 ZBTB7CA1YPR0 619 aa13.63□□□□□ -0.23
DDX11-213ENST00000539049 TBC1D32Q96NH3 1257 aa13.63□□□□□ -0.23
DDX11-213ENST00000539049 JARID2Q92833 1246 aaPredicted RBP13.63□□□□□ -0.23
DDX11-213ENST00000539049 TRIM6-TRIM34B2RNG4 842 aa13.62□□□□□ -0.23
DDX11-213ENST00000539049 MCM5P33992 734 aa13.62□□□□□ -0.23
DDX11-213ENST00000539049 TRIM34Q9BYJ4 488 aa13.62□□□□□ -0.23
DDX11-213ENST00000539049 KCNG1Q9UIX4 513 aa13.62□□□□□ -0.23
DDX11-213ENST00000539049 SAFB2Q14151 953 aaKnown RBP eCLIP13.62□□□□□ -0.23
DDX11-213ENST00000539049 NUTM2DQ5VT03 806 aaPredicted RBP13.62□□□□□ -0.23
DDX11-213ENST00000539049 TIGD1Q96MW7 591 aa13.62□□□□□ -0.23
DDX11-213ENST00000539049 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.62□□□□□ -0.23
DDX11-213ENST00000539049 PRG4Q92954 1404 aaPredicted RBP13.61□□□□□ -0.23
DDX11-213ENST00000539049 PTMSP20962 102 aa13.61□□□□□ -0.23
DDX11-213ENST00000539049 ROCK2O75116 1388 aaKnown RBP13.61□□□□□ -0.23
DDX11-213ENST00000539049 PDCL2Q8N4E4 241 aa13.61□□□□□ -0.23
DDX11-213ENST00000539049 CAMSAP2Q08AD1 1489 aa13.61□□□□□ -0.23
DDX11-213ENST00000539049 ZBTB9Q96C00 473 aa13.6□□□□□ -0.23
DDX11-213ENST00000539049 BCL2L13Q9BXK5 485 aa13.6□□□□□ -0.23
DDX11-213ENST00000539049 HMGN5P82970 282 aaKnown RBP13.6□□□□□ -0.23
DDX11-213ENST00000539049 MAPK8IP3Q9UPT6 1336 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms